Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0040
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein. 70 2e-12
AF067607-11|AAM81119.1| 412|Caenorhabditis elegans Innexin prot... 66 2e-11
AF067607-10|AAM81118.1| 436|Caenorhabditis elegans Innexin prot... 66 2e-11
Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical pr... 64 9e-11
Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical po... 64 9e-11
U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane p... 62 5e-10
U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein... 62 5e-10
U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein... 62 5e-10
AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin prote... 61 6e-10
AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin prote... 61 9e-10
AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin prote... 58 8e-09
AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin prote... 57 1e-08
Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U59211-1|AAB09670.1| 420|Caenorhabditis elegans embryonic membr... 56 2e-08
U53343-3|AAA96220.2| 420|Caenorhabditis elegans Innexin protein... 56 2e-08
Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical pr... 55 6e-08
U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane p... 55 6e-08
U41746-5|AAT81186.1| 492|Caenorhabditis elegans Innexin protein... 54 7e-08
U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein... 54 7e-08
U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein... 52 3e-07
Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. 52 4e-07
AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin prote... 52 4e-07
U97404-1|AAB93310.1| 408|Caenorhabditis elegans Innexin protein... 50 2e-06
Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein... 48 5e-06
AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction ... 48 5e-06
AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin prote... 48 5e-06
AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin prote... 48 5e-06
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 48 6e-06
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 48 6e-06
AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin prot... 47 1e-05
AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin prote... 40 0.002
Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical pr... 34 0.085
Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical pr... 34 0.085
Z81142-3|CAB03505.1| 491|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z68302-5|CAA92633.2| 382|Caenorhabditis elegans Hypothetical pr... 28 7.4
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 28 7.4
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 27 9.8
AF098993-5|AAC67468.1| 325|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical
protein R12H7.1 protein.
Length = 386
Score = 69.7 bits (163), Expect = 2e-12
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Frame = +3
Query: 117 DNNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMD----TYCWIYSTFT 284
D+ + +L+Y T I+ F++LV+++QY+G PI C V M+ YCW+ +T+
Sbjct: 21 DDIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFTEPMEQYTENYCWVQNTYF 80
Query: 285 IPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWK 452
+P DY+ PH + E YYQ V FVL +A+LFYVP +W+
Sbjct: 81 LPLH-------DYI-----PHNYAERENRQIGYYQWVPFVLALEALLFYVPTIVWR 124
>U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein.
Length = 386
Score = 69.7 bits (163), Expect = 2e-12
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Frame = +3
Query: 117 DNNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMD----TYCWIYSTFT 284
D+ + +L+Y T I+ F++LV+++QY+G PI C V M+ YCW+ +T+
Sbjct: 21 DDIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFTEPMEQYTENYCWVQNTYF 80
Query: 285 IPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWK 452
+P DY+ PH + E YYQ V FVL +A+LFYVP +W+
Sbjct: 81 LPLH-------DYI-----PHNYAERENRQIGYYQWVPFVLALEALLFYVPTIVWR 124
>AF067607-11|AAM81119.1| 412|Caenorhabditis elegans Innexin protein
18, isoform b protein.
Length = 412
Score = 66.5 bits (155), Expect = 2e-11
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Frame = +3
Query: 117 DNNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVM----DTYCWIYSTFT 284
D+ V RLHY T +++ F++LV+++QY+G PI+C V M + YCW+ +T+
Sbjct: 25 DDFVDRLHYLYTSTMVLMFAVLVSAKQYVGHPIECFVPAQFTRAMEQYTENYCWVQNTYW 84
Query: 285 IPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWKTXEG 464
+P +D + PH E YYQ V FVL A+ F++P +W+ G
Sbjct: 85 VP-------FQDLI-----PHRLDDRERRQIGYYQWVPFVLAVAALTFHIPSSVWRMLAG 132
>AF067607-10|AAM81118.1| 436|Caenorhabditis elegans Innexin protein
18, isoform a protein.
Length = 436
Score = 66.5 bits (155), Expect = 2e-11
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Frame = +3
Query: 117 DNNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVM----DTYCWIYSTFT 284
D+ V RLHY T +++ F++LV+++QY+G PI+C V M + YCW+ +T+
Sbjct: 25 DDFVDRLHYLYTSTMVLMFAVLVSAKQYVGHPIECFVPAQFTRAMEQYTENYCWVQNTYW 84
Query: 285 IPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWKTXEG 464
+P +D + PH E YYQ V FVL A+ F++P +W+ G
Sbjct: 85 VP-------FQDLI-----PHRLDDRERRQIGYYQWVPFVLAVAALTFHIPSSVWRMLAG 132
>Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical
protein R07D5.1 protein.
Length = 522
Score = 64.1 bits (149), Expect = 9e-11
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Frame = +3
Query: 117 DNNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVM----DTYCWIYSTFT 284
D+ V +L+Y T IL +F+LLV+++QY+G PI C V M + YCW+ +T+
Sbjct: 139 DDFVDKLNYYYTTTILASFALLVSAKQYVGFPIQCWVPATFTDAMEQYTENYCWVQNTYW 198
Query: 285 IPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWK 452
+P +Q + + + YYQ V F+L +A+LFYVP LW+
Sbjct: 199 VP-----------MQEDIPREIYSRRN-RQIGYYQWVPFILAIEALLFYVPCILWR 242
>Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical
polypeptide protein.
Length = 522
Score = 64.1 bits (149), Expect = 9e-11
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Frame = +3
Query: 117 DNNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVM----DTYCWIYSTFT 284
D+ V +L+Y T IL +F+LLV+++QY+G PI C V M + YCW+ +T+
Sbjct: 139 DDFVDKLNYYYTTTILASFALLVSAKQYVGFPIQCWVPATFTDAMEQYTENYCWVQNTYW 198
Query: 285 IPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWK 452
+P +Q + + + YYQ V F+L +A+LFYVP LW+
Sbjct: 199 VP-----------MQEDIPREIYSRRN-RQIGYYQWVPFILAIEALLFYVPCILWR 242
>U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane
protein protein.
Length = 428
Score = 61.7 bits (143), Expect = 5e-10
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Frame = +3
Query: 117 DNNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIV----DEIPLAVMDTYCWIYSTFT 284
D+ V +L+Y T I+ AF+++V+++QY+G PI C V + + YCW+ +T+
Sbjct: 19 DDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENTYY 78
Query: 285 IPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWK 452
+P L +Y G YYQ V FVL +A+ FY+P +W+
Sbjct: 79 LP--LTSAFPLEY----------GDRRARQISYYQWVPFVLALEALCFYIPCIMWR 122
>U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein 1,
isoform b protein.
Length = 383
Score = 61.7 bits (143), Expect = 5e-10
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Frame = +3
Query: 117 DNNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIV----DEIPLAVMDTYCWIYSTFT 284
D+ V +L+Y T I+ AF+++V+++QY+G PI C V + + YCW+ +T+
Sbjct: 19 DDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENTYY 78
Query: 285 IPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWK 452
+P L +Y G YYQ V FVL +A+ FY+P +W+
Sbjct: 79 LP--LTSAFPLEY----------GDRRARQISYYQWVPFVLALEALCFYIPCIMWR 122
>U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein 1,
isoform a protein.
Length = 428
Score = 61.7 bits (143), Expect = 5e-10
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Frame = +3
Query: 117 DNNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIV----DEIPLAVMDTYCWIYSTFT 284
D+ V +L+Y T I+ AF+++V+++QY+G PI C V + + YCW+ +T+
Sbjct: 19 DDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENTYY 78
Query: 285 IPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWK 452
+P L +Y G YYQ V FVL +A+ FY+P +W+
Sbjct: 79 LP--LTSAFPLEY----------GDRRARQISYYQWVPFVLALEALCFYIPCIMWR 122
>AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin protein
13 protein.
Length = 385
Score = 61.3 bits (142), Expect = 6e-10
Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 5/136 (3%)
Frame = +3
Query: 60 MFDVFGSVKGLLKLDSVCXDNNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDC-IVDEI 236
MF + +KGL K D+++ RL+Y T ++L+ F+L ++++QY+G PI C I +
Sbjct: 1 MFFLDAFLKGLHKQGD---DDSIDRLNYYWTPMLLVIFALTLSAKQYVGQPIQCWIPAQF 57
Query: 237 PLA---VMDTYCWIYSTFTI-PNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFV 404
A + YC++ +T+ I P++ I P E E YYQ V F+
Sbjct: 58 TGAWEQYSENYCFVQNTYFISPDKYI-------------PDSEIDREGAEIGYYQWVPFI 104
Query: 405 LFFQAILFYVPRYLWK 452
L QAILFY+P W+
Sbjct: 105 LGLQAILFYLPSLFWR 120
>AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin protein
16 protein.
Length = 372
Score = 60.9 bits (141), Expect = 9e-10
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Frame = +3
Query: 117 DNNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIVDEIPL----AVMDTYCWIYSTFT 284
D ++ RL+Y T ILIAFSLL+ ++ Y+G+P+ C + ++YC+I +T+
Sbjct: 22 DTSIDRLNYVVTTSILIAFSLLLFAKNYVGEPMQCWTPNQFAGGWESFAESYCFIENTYF 81
Query: 285 IPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLW 449
+P +D P EG++ + YYQ V F+L QA+ F VPR W
Sbjct: 82 VPM-------QDSNLPAAETR-EGREMI----YYQWVPFLLVIQALFFCVPRAFW 124
>AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin protein
19, isoform a protein.
Length = 454
Score = 57.6 bits (133), Expect = 8e-09
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
Frame = +3
Query: 39 PTRRAPAMFDVFGSVKGLLKLDSVCXDNN-VFRLHYKATXIILIAFSLLVTSRQYIGDPI 215
P R+ MF + + SV D++ V RL+Y T +IL L+++++QY G PI
Sbjct: 10 PLRQDRQMFFHATLARSFINALSVRGDDDAVDRLNYYYTPLILAVCCLVISAKQYGGTPI 69
Query: 216 DCIVD----EIPLAVMDTYCWIYSTFTIPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKY 383
+C V+ E +++YCWI +T+ IP + V D H +++ Y
Sbjct: 70 ECWVNPHSRESMEEYIESYCWIQNTYWIP--MYENVPDD--------HTAREEKQI--GY 117
Query: 384 YQXVXFVLFFQAILFYVPRYLWK 452
YQ V F+L +A++F +P W+
Sbjct: 118 YQWVPFILIAEALMFSLPCIFWR 140
>AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin protein
19, isoform b protein.
Length = 438
Score = 57.2 bits (132), Expect = 1e-08
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Frame = +3
Query: 117 DNNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIVD----EIPLAVMDTYCWIYSTFT 284
D+ V RL+Y T +IL L+++++QY G PI+C V+ E +++YCWI +T+
Sbjct: 21 DDAVDRLNYYYTPLILAVCCLVISAKQYGGTPIECWVNPHSRESMEEYIESYCWIQNTYW 80
Query: 285 IPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWK 452
IP + V D H +++ YYQ V F+L +A++F +P W+
Sbjct: 81 IP--MYENVPDD--------HTAREEKQI--GYYQWVPFILIAEALMFSLPCIFWR 124
>Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical
protein W04D2.3 protein.
Length = 465
Score = 56.0 bits (129), Expect = 2e-08
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Frame = +3
Query: 132 RLHYKATXIILIAFSLLVTSRQYIGDPIDCIV-DEIPLA---VMDTYCWIYSTFTI-PNR 296
RL+Y T IL+AFS+L++ +Q+ G PI+C+ ++ P + + YCW T+ + P +
Sbjct: 25 RLNYLMTPNILLAFSVLISFKQFGGRPIECMFPNKFPGSWEQYAENYCWSQDTYFVEPTQ 84
Query: 297 LIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWK 452
+ + K+ E YYQ V F L QA F P YLWK
Sbjct: 85 DVSLLKKE----------ERYTPDRQLSYYQWVPFFLLLQAAFFRAPSYLWK 126
>U59211-1|AAB09670.1| 420|Caenorhabditis elegans embryonic membrane
protein protein.
Length = 420
Score = 56.0 bits (129), Expect = 2e-08
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Frame = +3
Query: 117 DNNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIVD-EIP---LAVMDTYCWIYSTFT 284
D+ V RL Y T +L FS++V+ +QY+G I C + E + YC+I +TF
Sbjct: 21 DDAVDRLSYVTTATLLAFFSIMVSCKQYVGSAIQCWMPMEFKGGWEQYAEDYCFIQNTFF 80
Query: 285 IPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWKT 455
IP R + PG VE + + YYQ V VL QA +FY+P ++W +
Sbjct: 81 IPER--SEI------PG---DVEDRQKAEI-GYYQWVPIVLAIQAFMFYLPSWIWSS 125
>U53343-3|AAA96220.2| 420|Caenorhabditis elegans Innexin protein 3
protein.
Length = 420
Score = 56.0 bits (129), Expect = 2e-08
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Frame = +3
Query: 117 DNNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIVD-EIP---LAVMDTYCWIYSTFT 284
D+ V RL Y T +L FS++V+ +QY+G I C + E + YC+I +TF
Sbjct: 21 DDAVDRLSYVTTATLLAFFSIMVSCKQYVGSAIQCWMPMEFKGGWEQYAEDYCFIQNTFF 80
Query: 285 IPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWKT 455
IP R + PG VE + + YYQ V VL QA +FY+P ++W +
Sbjct: 81 IPER--SEI------PG---DVEDRQKAEI-GYYQWVPIVLAIQAFMFYLPSWIWSS 125
>Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical
protein C36H8.2 protein.
Length = 389
Score = 54.8 bits (126), Expect = 6e-08
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Frame = +3
Query: 132 RLHYKATXIILIAFSLLVTSRQYIGDPIDCIVDEIPLA----VMDTYCWIYSTFTIPNRL 299
RL+ + T +IL S L+ S +IGDPI C A ++ YC+++ T+ +P
Sbjct: 29 RLNSRVTVVILAVSSALLLSSHFIGDPITCWTPAQFNAQWVNFVNQYCFVHGTYFVP--- 85
Query: 300 IGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWK 452
+ + E + +V +YYQ V +V QA LFY+PR++WK
Sbjct: 86 --------LDQQLAFEEEERTKVSI-QYYQWVPYVFALQAFLFYIPRFIWK 127
>U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane
protein protein.
Length = 363
Score = 54.8 bits (126), Expect = 6e-08
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Frame = +3
Query: 132 RLHYKATXIILIAFSLLVTSRQYIGDPIDCIVDEIPLA----VMDTYCWIYSTFTIPNRL 299
RL+ + T +IL S L+ S +IGDPI C A ++ YC+++ T+ +P
Sbjct: 3 RLNSRVTVVILAVSSALLLSSHFIGDPITCWTPAQFNAQWVNFVNQYCFVHGTYFVP--- 59
Query: 300 IGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWK 452
+ + E + +V +YYQ V +V QA LFY+PR++WK
Sbjct: 60 --------LDQQLAFEEEERTKVSI-QYYQWVPYVFALQAFLFYIPRFIWK 101
>U41746-5|AAT81186.1| 492|Caenorhabditis elegans Innexin protein
10, isoform b protein.
Length = 492
Score = 54.4 bits (125), Expect = 7e-08
Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 7/139 (5%)
Frame = +3
Query: 69 VFGSVKGLLKLDSVCXDNN-VFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIVDEIPLA 245
V +V +L+ D + V RLH T +LI ++LV+ +Q+ G P++C+V +I +
Sbjct: 2 VLAAVLSMLRYVGGSDDRDFVDRLHSYFTCNLLIGLAVLVSFKQFGGKPVECLVPDIFSS 61
Query: 246 ----VMDTYCWIYSTFTIPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHK--YYQXVXFVL 407
+ YCW T+ +P +P G DE K YYQ V F L
Sbjct: 62 SWEQYAENYCWASDTYYVPTN----------EPVAGLQ---SDEKRQRKISYYQWVPFFL 108
Query: 408 FFQAILFYVPRYLWKTXEG 464
+A F +P LWK G
Sbjct: 109 LLEAACFRLPSLLWKYLAG 127
>U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein
10, isoform a protein.
Length = 559
Score = 54.4 bits (125), Expect = 7e-08
Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 7/139 (5%)
Frame = +3
Query: 69 VFGSVKGLLKLDSVCXDNN-VFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIVDEIPLA 245
V +V +L+ D + V RLH T +LI ++LV+ +Q+ G P++C+V +I +
Sbjct: 2 VLAAVLSMLRYVGGSDDRDFVDRLHSYFTCNLLIGLAVLVSFKQFGGKPVECLVPDIFSS 61
Query: 246 ----VMDTYCWIYSTFTIPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHK--YYQXVXFVL 407
+ YCW T+ +P +P G DE K YYQ V F L
Sbjct: 62 SWEQYAENYCWASDTYYVPTN----------EPVAGLQ---SDEKRQRKISYYQWVPFFL 108
Query: 408 FFQAILFYVPRYLWKTXEG 464
+A F +P LWK G
Sbjct: 109 LLEAACFRLPSLLWKYLAG 127
>U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein 5
protein.
Length = 447
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = +3
Query: 132 RLHYKATXIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMD----TYCWIYSTFTIPNRL 299
R Y+ T +L ++++ + QY+G PI C V + TYC+I T+ +P
Sbjct: 24 RFSYQYTSTLLGFSAIMMAASQYVGRPIQCWVPAQFTRTWEKYAETYCFIKGTYFLPGAF 83
Query: 300 IGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWKT 455
P V +V Y YQ + VL QA LFY+P +W+T
Sbjct: 84 ASEGEMSVTSPDDA--VTATPQVGY---YQWIPIVLVLQAFLFYLPSIIWRT 130
>Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical
protein F13G3.8 protein.
Length = 423
Score = 52.0 bits (119), Expect = 4e-07
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Frame = +3
Query: 66 DVFGSVKGLLK--LDSVCXDNNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIVD-EI 236
++ GS+ ++K LD + D RL+Y + +I++ SL +T+RQY+G P+ C V +
Sbjct: 2 NMLGSMFSMVKPRLDDLGTD----RLNYYYSTLIIMGMSLTITARQYVGSPLQCWVPAQF 57
Query: 237 PLA---VMDTYCWIYSTFTI-PNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFV 404
A + YC++Y+T+ + PN D V V V Q YYQ F+
Sbjct: 58 TKAWEQYAEDYCFVYNTYWVKPN--------DKVPLTVEERVSQQ-----LIYYQWAPFI 104
Query: 405 LFFQAILFYVPRYLW---KTXEGXRIKMLV 485
+ +A FY+P W T G I LV
Sbjct: 105 MAIEAAFFYLPVIFWSMLSTKSGINIIKLV 134
>U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein.
Length = 423
Score = 52.0 bits (119), Expect = 4e-07
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Frame = +3
Query: 66 DVFGSVKGLLK--LDSVCXDNNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIVD-EI 236
++ GS+ ++K LD + D RL+Y + +I++ SL +T+RQY+G P+ C V +
Sbjct: 2 NMLGSMFSMVKPRLDDLGTD----RLNYYYSTLIIMGMSLTITARQYVGSPLQCWVPAQF 57
Query: 237 PLA---VMDTYCWIYSTFTI-PNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFV 404
A + YC++Y+T+ + PN D V V V Q YYQ F+
Sbjct: 58 TKAWEQYAEDYCFVYNTYWVKPN--------DKVPLTVEERVSQQ-----LIYYQWAPFI 104
Query: 405 LFFQAILFYVPRYLW---KTXEGXRIKMLV 485
+ +A FY+P W T G I LV
Sbjct: 105 MAIEAAFFYLPVIFWSMLSTKSGINIIKLV 134
>AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin protein
4 protein.
Length = 554
Score = 52.0 bits (119), Expect = 4e-07
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 4/116 (3%)
Frame = +3
Query: 117 DNNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTY----CWIYSTFT 284
D+ V RL Y T LI ++LV+ +Q+ G P++C V A + Y CW +T+
Sbjct: 56 DDFVDRLSYFYTSSFLIMMAVLVSFKQFGGRPLECWVPAQFTASWEAYTEMYCWAQNTYW 115
Query: 285 IPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWK 452
+P + +D P + E YYQ V F L QA L+Y+P +W+
Sbjct: 116 VP------IDQDI------PVDISEREYRQISYYQWVPFFLLLQAFLYYIPCLMWR 159
>U97404-1|AAB93310.1| 408|Caenorhabditis elegans Innexin protein 12
protein.
Length = 408
Score = 50.0 bits (114), Expect = 2e-06
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Frame = +3
Query: 81 VKGLLKLDSVCXDNN-VFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIVDEIPLA---- 245
++ LL S D + V +L+Y AT I L+ S +T ++G PIDC
Sbjct: 4 IQNLLSAVSPQPDGDFVDKLNYCATTIGLVLASAFITGWSFVGSPIDCWFPAYYKGWWAE 63
Query: 246 -VMDTYCWIYSTFTIPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHK---YYQXVXFVLFF 413
+D YC++ +TF +P + + Y + + + YYQ V F+L
Sbjct: 64 YALD-YCYVQNTFFVPFS-EDKAERSYNWEQLVADKQNTTSLKQTNQIGYYQWVPFILAL 121
Query: 414 QAILFYVPRYLWKTXEG 464
QA+LFY P +W+ G
Sbjct: 122 QAMLFYFPVVIWRLFYG 138
>Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical
protein T23H4.1 protein.
Length = 483
Score = 49.6 bits (113), Expect = 2e-06
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 5/143 (3%)
Frame = +3
Query: 39 PTRRAPAMFDVFGSVKGLLKLDSVCXDNNVF-RLHYKATXIILIAFSLLVTSRQYIGDPI 215
P R P M VF + G L D+++F RLHY T L+ ++L++ + + G PI
Sbjct: 20 PGARVPRM--VFAEIVGTLSFLQPQADDDIFDRLHYYYTTTFLLLTAVLISLKMFGGRPI 77
Query: 216 DC-IVDEIPLAVMD---TYCWIYSTFTIPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKY 383
+C + E + D YCW +T+ + D + P V + E Y
Sbjct: 78 ECWLPAEYKSSWEDYTEMYCWARNTY------VTAFEDDNL-----PEVVNR-EYTMVSY 125
Query: 384 YQXVXFVLFFQAILFYVPRYLWK 452
YQ V F L + A FY P +W+
Sbjct: 126 YQWVPFFLVYVAFSFYAPCLIWR 148
>U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein 7
protein.
Length = 556
Score = 48.4 bits (110), Expect = 5e-06
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 14/123 (11%)
Frame = +3
Query: 126 VFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIVD----EIPLAVMDTYCWIYSTFTIP- 290
V +H T +L+ ++L++ +Q+ G PI+C+V + + YCW T+ IP
Sbjct: 22 VASIHSFLTSNLLVGLAVLISWKQFGGTPIECMVPLDFTSAWVQYSNNYCWAQPTYFIPF 81
Query: 291 -NRLIGRV--GKDYVQPGVGPHVEGQDEVXYHK------YYQXVXFVLFFQAILFYVPRY 443
L+ +V D V G+ G K YYQ + F L F+A F +P +
Sbjct: 82 TEELVEQVVDPADVVADGITIGNGGNRPRFVKKGGEKISYYQWMSFFLLFEAACFRLPCF 141
Query: 444 LWK 452
+WK
Sbjct: 142 IWK 144
>AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction
innexin protein.
Length = 362
Score = 48.4 bits (110), Expect = 5e-06
Identities = 30/110 (27%), Positives = 49/110 (44%)
Frame = +3
Query: 132 RLHYKATXIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTYCWIYSTFTIPNRLIGRV 311
RL Y T +L + + + ++QY+G I C + + Y Y I N +
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCL--IENTYYVHM 80
Query: 312 GKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWKTXE 461
+ GP + E+ KYYQ V F+LF A++ Y+PR +W +
Sbjct: 81 NNSNLP---GPAIRENKEL---KYYQWVPFILFGLAVVIYIPRVIWNALQ 124
>AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin protein
17, isoform b protein.
Length = 266
Score = 48.4 bits (110), Expect = 5e-06
Identities = 30/110 (27%), Positives = 49/110 (44%)
Frame = +3
Query: 132 RLHYKATXIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTYCWIYSTFTIPNRLIGRV 311
RL Y T +L + + + ++QY+G I C + + Y Y I N +
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCL--IENTYYVHM 80
Query: 312 GKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWKTXE 461
+ GP + E+ KYYQ V F+LF A++ Y+PR +W +
Sbjct: 81 NNSNLP---GPAIRENKEL---KYYQWVPFILFGLAVVIYIPRVIWNALQ 124
>AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin protein
17, isoform a protein.
Length = 362
Score = 48.4 bits (110), Expect = 5e-06
Identities = 30/110 (27%), Positives = 49/110 (44%)
Frame = +3
Query: 132 RLHYKATXIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTYCWIYSTFTIPNRLIGRV 311
RL Y T +L + + + ++QY+G I C + + Y Y I N +
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCL--IENTYYVHM 80
Query: 312 GKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWKTXE 461
+ GP + E+ KYYQ V F+LF A++ Y+PR +W +
Sbjct: 81 NNSNLP---GPAIRENKEL---KYYQWVPFILFGLAVVIYIPRVIWNALQ 124
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 48.0 bits (109), Expect = 6e-06
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Frame = +3
Query: 120 NNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTY----CWIYSTFTI 287
+ + R++ T +L+A +L ++ +QY G PI C D Y C+I +T+ +
Sbjct: 26 DTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFSGSWDGYVHDFCFIENTYFV 85
Query: 288 PNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLW 449
PN G D + G H+ YY+ V VL FQA +F +P +LW
Sbjct: 86 PN---GTEVTDEARG--GRHI---------NYYRWVPLVLLFQAAMFVLPYHLW 125
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 48.0 bits (109), Expect = 6e-06
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Frame = +3
Query: 120 NNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTY----CWIYSTFTI 287
+ + R++ T +L+A +L ++ +QY G PI C D Y C+I +T+ +
Sbjct: 26 DTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFSGSWDGYVHDFCFIENTYFV 85
Query: 288 PNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLW 449
PN G D + G H+ YY+ V VL FQA +F +P +LW
Sbjct: 86 PN---GTEVTDEARG--GRHI---------NYYRWVPLVLLFQAAMFVLPYHLW 125
>AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin protein
22 protein.
Length = 462
Score = 46.8 bits (106), Expect = 1e-05
Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
Frame = +3
Query: 117 DNNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDCI-VDEIP---LAVMDTYCWIYSTFT 284
DN R+ + T ILI F LV+S G PI C+ + E P +C+
Sbjct: 20 DNGAERIVHTTTIQILICFGFLVSSNMMFGQPITCLMLPETPDSSANYFHDFCFYQDKLR 79
Query: 285 IPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWK 452
IP L V + Q + + EV YYQ F++F Q + VP +WK
Sbjct: 80 IP-PLHNAVKRSTRQGTMNINNIMPQEVAV-TYYQWTPFIIFLQVAMCLVPALMWK 133
>AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin protein
15 protein.
Length = 382
Score = 39.5 bits (88), Expect = 0.002
Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 7/135 (5%)
Frame = +3
Query: 117 DNNVFRLHYKATXIILIAFSLLVTSRQYIGDPIDCIVD-EIPLAVMD---TYCWIYSTFT 284
D+ + RL+++ + + +L++ Y G I C E + YC I +T+
Sbjct: 18 DDFIDRLNFQYSAYVFALSALVIGYHTYFGRAISCWTPAEFKGGWNEYTTDYCLIENTYY 77
Query: 285 IPNRLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWKT--- 455
+P P + P E E YYQ V F+L F A LFY+P W T
Sbjct: 78 VPLE----------DPNMPP--ERYREEKELSYYQWVQFILVFLAFLFYLPYLYWSTVNW 125
Query: 456 XEGXRIKMLVLDLNC 500
G ++K V+D+ C
Sbjct: 126 WSGLQVK-AVVDVAC 139
>Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical
protein F07A5.1b protein.
Length = 434
Score = 34.3 bits (75), Expect = 0.085
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 6/112 (5%)
Frame = +3
Query: 132 RLHYKATXIILIAFSLLVTSRQYIGDPIDCIV----DEIP--LAVMDTYCWIYSTFTIPN 293
RLH T +L F LL ++Q+ G+PIDC++ D++ + +C Y TF
Sbjct: 27 RLHL-FTVYLLGFFVLLTGAKQHFGNPIDCMLPKQHDDLKSWRDYIHNFCLFYGTF---- 81
Query: 294 RLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLW 449
R G + E YYQ V F FQ F +P + W
Sbjct: 82 ----RYDVSNGTSEFGSYTEDASV----NYYQWVPFFFAFQVCCFLLPFWCW 125
>Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical
protein F07A5.1a protein.
Length = 432
Score = 34.3 bits (75), Expect = 0.085
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 6/112 (5%)
Frame = +3
Query: 132 RLHYKATXIILIAFSLLVTSRQYIGDPIDCIV----DEIP--LAVMDTYCWIYSTFTIPN 293
RLH T +L F LL ++Q+ G+PIDC++ D++ + +C Y TF
Sbjct: 27 RLHL-FTVYLLGFFVLLTGAKQHFGNPIDCMLPKQHDDLKSWRDYIHNFCLFYGTF---- 81
Query: 294 RLIGRVGKDYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLW 449
R G + E YYQ V F FQ F +P + W
Sbjct: 82 ----RYDVSNGTSEFGSYTEDASV----NYYQWVPFFFAFQVCCFLLPFWCW 125
>Z81142-3|CAB03505.1| 491|Caenorhabditis elegans Hypothetical
protein ZK1037.6 protein.
Length = 491
Score = 28.7 bits (61), Expect = 4.2
Identities = 23/75 (30%), Positives = 35/75 (46%)
Frame = -1
Query: 337 TPGCT*SFPTRPISLFGMVKVEYIQQYVSITASGISSTMQSIGSPMYCRDVTRSENAIKI 158
TPG TR S F + ++S A G+S+T QSI + + + T+S N K+
Sbjct: 342 TPGFAQFSFTRKNSTFQSSSFLGRRGFISANAYGVSTTQQSINTYINAPNNTQSAN-FKV 400
Query: 157 IXVAL*CKRNTLLSM 113
V+ N+ L M
Sbjct: 401 TVVSADLVENSTLKM 415
>Z68302-5|CAA92633.2| 382|Caenorhabditis elegans Hypothetical
protein ZK792.2 protein.
Length = 382
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 4/105 (3%)
Frame = +3
Query: 150 TXIILIAFSLLVTSRQYIGDPIDCIVDEIPLA----VMDTYCWIYSTFTIPNRLIGRVGK 317
T + I ++L +++ Y+G ++C + + + YC++ T+ P
Sbjct: 31 TAFLFITAAILTSAKTYVGSAMECWLPQTYSGDWGEFAENYCFLKDTYFYPR-------- 82
Query: 318 DYVQPGVGPHVEGQDEVXYHKYYQXVXFVLFFQAILFYVPRYLWK 452
Q + E YYQ L I F +P++LW+
Sbjct: 83 ---QQSMTDIPMYHKERHRLTYYQWSSMYLAVAGIAFMIPKFLWR 124
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 267 IYSTFTIPNRLIGRVGKDYVQPGVGPHV 350
I S F P+R +GR K Y VGP V
Sbjct: 58 IVSNFREPDRRLGRYSKYYYHHNVGPEV 85
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 469 ASRCWSWILTVPSLKTSASRXVXSYLXTI 555
A R W+W+L + S + S S + YL T+
Sbjct: 2752 AFRVWNWLLRMVSSEYSVSDIILQYLTTL 2780
>AF098993-5|AAC67468.1| 325|Caenorhabditis elegans Hypothetical
protein T10B11.6 protein.
Length = 325
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 1 ARYVAHVRTHDRDRRAARPPCLTF 72
+ +VAH+RTH +D R A CL F
Sbjct: 296 SEHVAHIRTHPKDYRTA---CLNF 316
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,312,107
Number of Sequences: 27780
Number of extensions: 239967
Number of successful extensions: 730
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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