Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0036
         (627 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p pro...   270   1e-72
AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD...   270   1e-72
AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC...   270   1e-72
AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA...   270   1e-72
BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p pro...   254   5e-68
AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB...   254   5e-68
AY118620-1|AAM49989.1| 1394|Drosophila melanogaster LP11788p pro...    37   0.026
AE014297-4145|AAF56722.1| 1511|Drosophila melanogaster CG5639-PA...    37   0.026
AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA...    31   1.7  

>AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p
           protein.
          Length = 194

 Score =  270 bits (661), Expect = 1e-72
 Identities = 132/174 (75%), Positives = 149/174 (85%)
 Frame = +2

Query: 5   IIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPK 184
           IIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+
Sbjct: 7   IIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQ 66

Query: 185 LKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDA 364
            K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDA
Sbjct: 67  QKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDA 126

Query: 365 ILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKXDTXQXXYKKLTG 526
           ILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHK DT    YKKLTG
Sbjct: 127 ILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTG 180


>AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD,
           isoform D protein.
          Length = 194

 Score =  270 bits (661), Expect = 1e-72
 Identities = 132/174 (75%), Positives = 149/174 (85%)
 Frame = +2

Query: 5   IIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPK 184
           IIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+
Sbjct: 7   IIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQ 66

Query: 185 LKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDA 364
            K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDA
Sbjct: 67  QKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDA 126

Query: 365 ILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKXDTXQXXYKKLTG 526
           ILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHK DT    YKKLTG
Sbjct: 127 ILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTG 180


>AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC,
           isoform C protein.
          Length = 194

 Score =  270 bits (661), Expect = 1e-72
 Identities = 132/174 (75%), Positives = 149/174 (85%)
 Frame = +2

Query: 5   IIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPK 184
           IIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+
Sbjct: 7   IIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQ 66

Query: 185 LKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDA 364
            K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDA
Sbjct: 67  QKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDA 126

Query: 365 ILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKXDTXQXXYKKLTG 526
           ILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHK DT    YKKLTG
Sbjct: 127 ILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTG 180


>AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA,
           isoform A protein.
          Length = 194

 Score =  270 bits (661), Expect = 1e-72
 Identities = 132/174 (75%), Positives = 149/174 (85%)
 Frame = +2

Query: 5   IIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPK 184
           IIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+
Sbjct: 7   IIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQ 66

Query: 185 LKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDA 364
            K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDA
Sbjct: 67  QKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDA 126

Query: 365 ILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKXDTXQXXYKKLTG 526
           ILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHK DT    YKKLTG
Sbjct: 127 ILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTG 180


>BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p
           protein.
          Length = 250

 Score =  254 bits (623), Expect = 5e-68
 Identities = 124/161 (77%), Positives = 141/161 (87%)
 Frame = +2

Query: 5   IIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPK 184
           IIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+
Sbjct: 7   IIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQ 66

Query: 185 LKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDA 364
            K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDA
Sbjct: 67  QKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDA 126

Query: 365 ILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHK 487
           ILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHK
Sbjct: 127 ILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHK 167


>AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB,
           isoform B protein.
          Length = 250

 Score =  254 bits (623), Expect = 5e-68
 Identities = 124/161 (77%), Positives = 141/161 (87%)
 Frame = +2

Query: 5   IIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPK 184
           IIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+
Sbjct: 7   IIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQ 66

Query: 185 LKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDA 364
            K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDA
Sbjct: 67  QKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDA 126

Query: 365 ILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHK 487
           ILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHK
Sbjct: 127 ILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHK 167


>AY118620-1|AAM49989.1| 1394|Drosophila melanogaster LP11788p protein.
          Length = 1394

 Score = 36.7 bits (81), Expect = 0.026
 Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 13/157 (8%)
 Frame = +2

Query: 23   AEADSFETSISQALVELETNSDLKAQLR-ELYITKAKEIELHNKKSIIIYVPMP----KL 187
            A A + E+S+++ ++EL  NS L +QL  E    K  E++    +++    P P    + 
Sbjct: 1115 ATASAAESSVTERVLEL-ANSLLDSQLSVEQATLKPMELKTTRCRALSKTAPFPVSCDEA 1173

Query: 188  KAFQKIQIR-----LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 352
             AF+ +Q        V     +    HV   GDR+    P     +         R++ +
Sbjct: 1174 GAFRPLQCNGRSCWCVDAAGNQLQSTHVFGAGDRRCSHVPIEAVAIELHLTNSSGRSIRN 1233

Query: 353  VYDAI---LEDLVFPAEIVGKRIRVKLDGSQLIKVHL 454
             YD I   L+ L+    +   R++   DGS +++  L
Sbjct: 1234 AYDTIRRELQQLLGGESVENLRVQENFDGSAIVRFEL 1270


>AE014297-4145|AAF56722.1| 1511|Drosophila melanogaster CG5639-PA
            protein.
          Length = 1511

 Score = 36.7 bits (81), Expect = 0.026
 Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 13/157 (8%)
 Frame = +2

Query: 23   AEADSFETSISQALVELETNSDLKAQLR-ELYITKAKEIELHNKKSIIIYVPMP----KL 187
            A A + E+S+++ ++EL  NS L +QL  E    K  E++    +++    P P    + 
Sbjct: 1232 ATASAAESSVTERVLEL-ANSLLDSQLSVEQATLKPMELKTTRCRALSKTAPFPVSCDEA 1290

Query: 188  KAFQKIQIR-----LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 352
             AF+ +Q        V     +    HV   GDR+    P     +         R++ +
Sbjct: 1291 GAFRPLQCNGRSCWCVDAAGNQLQSTHVFGAGDRRCSHVPIEAVAIELHLTNSSGRSIRN 1350

Query: 353  VYDAI---LEDLVFPAEIVGKRIRVKLDGSQLIKVHL 454
             YD I   L+ L+    +   R++   DGS +++  L
Sbjct: 1351 AYDTIRRELQQLLGGESVENLRVQENFDGSAIVRFEL 1387


>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
           protein.
          Length = 1489

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 18/66 (27%), Positives = 36/66 (54%)
 Frame = +2

Query: 146 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 325
           NKK  ++   + KL  +++    +  + + K   KH+  V + K  PK + KT+ + K+K
Sbjct: 567 NKK--LLNSSVVKLSLYEQNPRMVPSKFQPKCEEKHMEPVAEEKPKPKSAAKTKESRKRK 624

Query: 326 RPRSRT 343
           +P ++T
Sbjct: 625 QPVAQT 630


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,614,933
Number of Sequences: 53049
Number of extensions: 458567
Number of successful extensions: 1156
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)