Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0035
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    28   0.27 
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       25   1.9  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    24   5.8  
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    23   7.6  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 28.3 bits (60), Expect = 0.27
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 595  SWVVANLLXV*AYFLLDFLKSGLTV-WWFSXIHFVYSYDE 479
            ++V+AN L V   FLL   K  L + WWF+  + + S+DE
Sbjct: 927  AFVMANALFVLVIFLLQLKKQELHIEWWFNVKNKI-SFDE 965


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +2

Query: 524 SEPRFEEIKKEVC--SYXKKIGYNPAAXAFV-PIXGMARETTCWSLQP 658
           S+P FEE++K VC  +Y   +     +  F+  +  + RE  CW + P
Sbjct: 380 SDPSFEEMRKVVCVDNYRPSVQNRWTSDPFLASMSKLMRE--CWHMNP 425


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 11/47 (23%), Positives = 22/47 (46%)
 Frame = +1

Query: 577 DWLQPSCXRFRAHXWDGTGDNMLEPSTKMPWFRGWQVERKEGKADGN 717
           D+    C  ++   + G GD+      +  +  GWQ+E++ G +  N
Sbjct: 175 DYQPDICKDYKETGYCGFGDSCKFLHDRSDYKHGWQMEQEGGGSGHN 221


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = +1

Query: 577 DWLQPSCXRFRAHXWDGTGDNMLEPSTKMPWFRGWQVERKEGKADGN 717
           D+    C  ++   + G GD+      +  +  GWQ+E +EG   G+
Sbjct: 175 DYQPDICKDYKETGYCGFGDSCKFLHDRSDYKHGWQME-QEGAGSGH 220


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 769,216
Number of Sequences: 2352
Number of extensions: 16647
Number of successful extensions: 57
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)