Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0034
(750 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondria... 105 2e-21
UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellul... 94 3e-18
UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondr... 93 7e-18
UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondria... 93 9e-18
UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellu... 85 2e-15
UniRef50_Q5MCG5 Cluster: Mitochondrial ATP synthase beta subunit... 82 1e-14
UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellu... 78 3e-13
UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellul... 67 5e-10
UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5; Bactero... 65 2e-09
UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4; Bac... 63 8e-09
UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12; Candid... 57 4e-07
UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP synt... 55 2e-06
UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3; Gammaprot... 55 2e-06
UniRef50_A6DUD8 Cluster: F0F1 ATP synthase subunit beta; n=1; Le... 51 3e-05
UniRef50_Q9RQ76 Cluster: Beta subunit of membrane-bound ATP synt... 51 4e-05
UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27; Ba... 48 3e-04
UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2; Amphidi... 47 6e-04
UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1; Azo... 46 8e-04
UniRef50_Q1NYL2 Cluster: ATP synthase beta chain; n=1; Candidatu... 46 0.001
UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4; Leucon... 46 0.001
UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47; Bacte... 46 0.001
UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellu... 44 0.004
UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1; Parame... 43 0.007
UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3; Legio... 43 0.009
UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:... 41 0.037
UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2; Firmic... 39 0.15
UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100; ce... 38 0.26
UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n... 36 0.81
UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6; Prot... 36 1.4
UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasm... 33 5.7
UniRef50_A7DHD2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q2LAJ4 Cluster: Auxin response factor 3; n=2; core eudi... 33 7.5
UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasm... 33 9.9
UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secreto... 33 9.9
UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1; S... 33 9.9
UniRef50_Q2IVE8 Cluster: Peptidase S15; n=1; Rhodopseudomonas pa... 33 9.9
UniRef50_A7QPQ9 Cluster: Chromosome chr10 scaffold_138, whole ge... 33 9.9
>UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=3027; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Homo sapiens
(Human)
Length = 529
Score = 105 bits (251), Expect = 2e-21
Identities = 55/95 (57%), Positives = 62/95 (65%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
VRTIAMDGTE LVRGQ VL SG+PI P TL I+NV G PID RGPI T + A IH
Sbjct: 108 VRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIH 167
Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
AE+P ++ + E V IKV D L PYA GG I
Sbjct: 168 AEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKI 202
Score = 82.2 bits (194), Expect = 1e-14
Identities = 42/64 (65%), Positives = 49/64 (76%), Gaps = 5/64 (7%)
Frame = +1
Query: 97 RDYAAKS-----AGKGQGKVVAVIGAXVDVQFEDNLPPILNALEVQNRSPRLVLEVTQHL 261
RDYAA++ AG G++VAVIGA VDVQF++ LPPILNALEVQ R RLVLEV QHL
Sbjct: 44 RDYAAQTSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHL 103
Query: 262 GXNT 273
G +T
Sbjct: 104 GEST 107
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = +1
Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEMI 708
GKT LIMELINNV +AHG YS AG GER + NDLY EMI
Sbjct: 211 GKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI 251
>UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellular
organisms|Rep: ATP synthase subunit beta - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 504
Score = 94.3 bits (224), Expect = 3e-18
Identities = 49/95 (51%), Positives = 56/95 (58%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
VRTIAMD TE LVRGQ V +G PI P TL I+NV G P+D GP+ T AIH
Sbjct: 84 VRTIAMDSTEGLVRGQKVADTGGPIAVPVGKETLGRIMNVIGEPVDEAGPLKTSARRAIH 143
Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
E+P VD + + V IKV D L PYA GG I
Sbjct: 144 QEAPAYVDQSTEAQILVTGIKVVDLLAPYAKGGKI 178
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = +1
Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEMI 708
GKT LIMELINNV +AHG YS AG GER + NDLY EMI
Sbjct: 187 GKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI 227
Score = 60.1 bits (139), Expect = 6e-08
Identities = 31/48 (64%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +1
Query: 133 GKVVAVIGAXVDVQFEDN-LPPILNALEVQNRSPRLVLEVTQHLGXNT 273
G+V VIGA VDV FE+ LP ILNALE N RLVLEV QHLG N+
Sbjct: 36 GRVTQVIGAVVDVAFEEGQLPQILNALETDNNGNRLVLEVAQHLGENS 83
>UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondrial
precursor; n=1793; root|Rep: ATP synthase subunit
beta-3, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 559
Score = 93.1 bits (221), Expect = 7e-18
Identities = 49/95 (51%), Positives = 57/95 (60%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
VRTIAMDGTE LVRG+ VL +G+PI P TL I+NV G PID RG I T+ IH
Sbjct: 136 VRTIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIH 195
Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
++P +VD E IKV D L PY GG I
Sbjct: 196 RDAPALVDLATGQEILATGIKVVDLLAPYQRGGKI 230
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/53 (62%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
Frame = +1
Query: 121 GKGQ-GKVVAVIGAXVDVQFEDN--LPPILNALEVQNRSPRLVLEVTQHLGXN 270
GKG G+V VIGA VDV+FED LPPI+ +LEVQ+ RLVLEV+ HLG N
Sbjct: 82 GKGAIGRVCQVIGAIVDVRFEDQEGLPPIMTSLEVQDHPTRLVLEVSHHLGQN 134
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +1
Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEMI 708
GKT LIMELINNV +AHG +S AG GER + NDLY EMI
Sbjct: 239 GKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMI 279
>UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=14; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 511
Score = 92.7 bits (220), Expect = 9e-18
Identities = 50/95 (52%), Positives = 55/95 (57%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
VRTIAMDGTE LVRG+ VL +G PI P TL IINV G PID RGPI + IH
Sbjct: 92 VRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIH 151
Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
A+ P + E IKV D L PYA GG I
Sbjct: 152 ADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKI 186
Score = 64.5 bits (150), Expect = 3e-09
Identities = 39/72 (54%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Frame = +1
Query: 76 QSMPLTSRDYAAKSAGKGQ-----GKVVAVIGAXVDVQFEDN-LPPILNALEVQNRSPRL 237
QS PL S + A Q GKV AVIGA VDV FE + LP ILNALE++ +L
Sbjct: 20 QSAPLLSTSWKRCMASAAQSTPITGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKL 79
Query: 238 VLEVTQHLGXNT 273
VLEV QHLG NT
Sbjct: 80 VLEVAQHLGENT 91
Score = 52.0 bits (119), Expect = 2e-05
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +1
Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEM 705
GKT I ELINN+ +AHG +S G GER + NDLY EM
Sbjct: 195 GKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREM 234
>UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellular
organisms|Rep: ATP synthase subunit beta - Zymomonas
mobilis
Length = 484
Score = 84.6 bits (200), Expect = 2e-15
Identities = 43/95 (45%), Positives = 56/95 (58%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
VRTI+MD T+ LVRGQ V+ +GS I P TL I+NV G P+D RGPI + +T IH
Sbjct: 58 VRTISMDTTDGLVRGQEVVDTGSEIRVPVGPETLGRIMNVVGRPVDERGPIGSKQTMPIH 117
Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
A++P + IKV D L PY+ GG +
Sbjct: 118 ADAPPFTEQSTDTAILTTGIKVIDLLAPYSKGGKV 152
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/55 (52%), Positives = 37/55 (67%)
Frame = +1
Query: 106 AAKSAGKGQGKVVAVIGAXVDVQFEDNLPPILNALEVQNRSPRLVLEVTQHLGXN 270
A S+ K G++ VIG VDV FE+ LPP+L ALE +N+ +VLEV QHLG N
Sbjct: 2 ATASSKKNIGRISQVIGPVVDVLFEEKLPPLLTALETKNQDATVVLEVAQHLGEN 56
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/41 (56%), Positives = 28/41 (68%)
Frame = +1
Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEMI 708
GKT LI ELINN+ + HG +S AG GER + NDLY E +
Sbjct: 161 GKTVLIQELINNIAKGHGGFSVFAGVGERTREGNDLYHEFL 201
>UniRef50_Q5MCG5 Cluster: Mitochondrial ATP synthase beta subunit;
n=1; Mesenchytraeus solifugus|Rep: Mitochondrial ATP
synthase beta subunit - Mesenchytraeus solifugus
(glacier ice worm)
Length = 136
Score = 82.2 bits (194), Expect = 1e-14
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +1
Query: 130 QGKVVAVIGAXVDVQFEDNLPPILNALEVQNRSPRLVLEVTQHLGXNT 273
+G+V+AVIGA VDVQF+D LPPILNALEV NR PRL+LEV QHLG NT
Sbjct: 59 KGRVIAVIGAVVDVQFDDELPPILNALEVANRKPRLILEVAQHLGENT 106
Score = 40.3 bits (90), Expect = 0.049
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXP 358
VRTIAMDGTE LVRGQ +GSPI P
Sbjct: 107 VRTIAMDGTEGLVRGQVCTDTGSPITIP 134
>UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellular
organisms|Rep: ATP synthase subunit beta - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 487
Score = 77.8 bits (183), Expect = 3e-13
Identities = 44/95 (46%), Positives = 51/95 (53%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
VR IAMD T+ LVRG V +G I P TL I+NV G PID RGPI ++ IH
Sbjct: 64 VRCIAMDTTDGLVRGTEVRDTGKQIMVPVGPATLGRILNVVGEPIDERGPISSELRFPIH 123
Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
+P + A E V IKV D L PY GG I
Sbjct: 124 RPAPSFEEQAAASEILVTGIKVVDLLCPYLKGGKI 158
Score = 53.2 bits (122), Expect = 7e-06
Identities = 29/53 (54%), Positives = 34/53 (64%)
Frame = +1
Query: 106 AAKSAGKGQGKVVAVIGAXVDVQFEDNLPPILNALEVQNRSPRLVLEVTQHLG 264
+A +A G+V V G VDVQFE +LP ILNAL VQN LVLEV Q +G
Sbjct: 8 SAGAANNVVGRVTQVRGPVVDVQFEGDLPFILNALHVQNGDHTLVLEVAQEIG 60
Score = 52.8 bits (121), Expect = 9e-06
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +1
Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEM 705
GKT +I ELINN+ +AHG S AG GER + NDLY EM
Sbjct: 167 GKTVIIQELINNIAKAHGGVSVFAGVGERTREGNDLYFEM 206
>UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellular
organisms|Rep: ATP synthase subunit beta -
Fervidobacterium islandicum
Length = 472
Score = 66.9 bits (156), Expect = 5e-10
Identities = 36/95 (37%), Positives = 49/95 (51%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
VRT+AMD T+ LVRG V +G PI P L + NV G PID +G + + IH
Sbjct: 57 VRTVAMDSTDGLVRGLEVENTGEPIKAPVGRGVLGRMFNVIGEPIDEQGELKDIEYWPIH 116
Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
+P + + + E +KV D L P+ GG I
Sbjct: 117 RPAPSMTEQKTEIEILETGLKVIDLLAPFPKGGKI 151
Score = 46.4 bits (105), Expect = 8e-04
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1
Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEM 705
GKT L+ME+I N+ H +S AG GER + NDLY EM
Sbjct: 160 GKTVLVMEMIRNIAIEHHGFSIFAGVGERTREGNDLYLEM 199
Score = 41.9 bits (94), Expect = 0.016
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Frame = +1
Query: 124 KGQGKVVAVIGAXVDVQF-EDNLPPILNALEVQN--RSPRLVLEVTQHLGXN 270
K GK+V +IG VDV+F E +LP I +AL V N +L+LEV Q +G N
Sbjct: 4 KSVGKIVRIIGPVVDVKFQEGDLPDIYDALVVINPQTGKKLILEVEQLIGDN 55
>UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5;
Bacteroides|Rep: ATP synthase subunit beta - Bacteroides
fragilis
Length = 505
Score = 64.9 bits (151), Expect = 2e-09
Identities = 36/95 (37%), Positives = 45/95 (47%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
VRT+AMD T+ L RG V +G PI P ++NV G ID + D +IH
Sbjct: 59 VRTVAMDSTDGLQRGMKVFPTGGPITMPVGEQIKGRLMNVVGDSIDGMKELNRDGAYSIH 118
Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
+ P D E IKV D L PY+ GG I
Sbjct: 119 RDPPKFEDLTTVQEVLFTGIKVIDLLEPYSKGGKI 153
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = +1
Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEMI 708
GKT LIMELINN+ + H +S AG GER + NDL EMI
Sbjct: 162 GKTVLIMELINNIAKKHNGFSVFAGVGERTREGNDLLREMI 202
Score = 39.5 bits (88), Expect = 0.086
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Frame = +1
Query: 133 GKVVAVIGAXVDVQFEDN-----LPPILNALEV-QNRSPRLVLEVTQHLGXNT 273
G + VIG VDV FE LP I +ALE+ ++ +L++EV QH+G NT
Sbjct: 6 GHISQVIGPVVDVYFEGTESDLILPSIHDALEIKRHNGKKLIVEVQQHIGENT 58
>UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4;
Bacteroidetes|Rep: ATP synthase F1, beta subunit -
Microscilla marina ATCC 23134
Length = 505
Score = 62.9 bits (146), Expect = 8e-09
Identities = 38/95 (40%), Positives = 44/95 (46%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
VRTIAM+GTE L RG V PI P + NV G ID TD+ +IH
Sbjct: 56 VRTIAMEGTEGLQRGMDVTDKEGPISMPTGDGIKGRLFNVVGEAIDGIENPKTDRRVSIH 115
Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
+P + E IKV D L PYA GG I
Sbjct: 116 RAAPTFDQLTTETEVLFTGIKVIDLLEPYAKGGKI 150
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +1
Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEMI 708
GKT LI ELINN+ +A+ S AG GER + NDL EMI
Sbjct: 159 GKTVLIQELINNIAKAYAGVSVFAGVGERTREGNDLLREMI 199
Score = 46.4 bits (105), Expect = 8e-04
Identities = 27/51 (52%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Frame = +1
Query: 133 GKVVAVIGAXVDVQFED---NLPPILNALEVQNRSPRLV-LEVTQHLGXNT 273
GK+ VIG VDV F D +LP ILNALEV + ++V LE QHLG +T
Sbjct: 5 GKITQVIGPVVDVSFTDEKSHLPKILNALEVTKENGQVVILECQQHLGEDT 55
>UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12;
Candidatus Carsonella ruddii|Rep: ATP synthase beta
subunit - Carsonella ruddii
Length = 139
Score = 57.2 bits (132), Expect = 4e-07
Identities = 33/89 (37%), Positives = 42/89 (47%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
VR IA T L R VL +G PI P TL I+N+ G PID +G I + K IH
Sbjct: 49 VRVIAFGDTNGLKRNMIVLDTGKPILTPVGDCTLGRILNILGNPIDNKGNIFSSKKVPIH 108
Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPY 541
P D ++ IK+ D L P+
Sbjct: 109 KLPPKFSDQIFNNDILETGIKIIDLLCPF 137
>UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP
synthase; n=8; cellular organisms|Rep: Beta subunit of
membrane-bound ATP synthase - Buchnera aphidicola
Length = 147
Score = 55.2 bits (127), Expect = 2e-06
Identities = 26/45 (57%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 133 GKVVAVIGAXVDVQFEDN-LPPILNALEVQNRSPRLVLEVTQHLG 264
GK++ +IGA VDV+F N +P I NALEVQN+ +L+LEV Q LG
Sbjct: 4 GKIIQIIGAVVDVEFNQNSVPKIYNALEVQNKYHKLILEVQQQLG 48
Score = 47.6 bits (108), Expect = 3e-04
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTA--- 445
VRTIAM ++ L RG V G I P TL I+NV G ID +G + + +
Sbjct: 52 VRTIAMGSSDGLKRGLIVNDLGHYIKVPVGEPTLGRILNVLGETIDNKGLLKSKRNTNIE 111
Query: 446 --AIHAESPXVVDXXAQHETXVXVIKVXDXLXPYA 544
IH P +D + E IKV D + P++
Sbjct: 112 YWEIHRSPPNYIDQSSSKEILETGIKVIDLICPFS 146
>UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3;
Gammaproteobacteria|Rep: ATP synthase beta chain -
Pseudomonas aeruginosa C3719
Length = 154
Score = 55.2 bits (127), Expect = 2e-06
Identities = 31/74 (41%), Positives = 40/74 (54%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
VR+IAM TE L RG V +G+ I P TL I++V G PID GPI ++ IH
Sbjct: 50 VRSIAMGSTEGLKRGLNVDSTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEERWGIH 109
Query: 455 AESPXVVDXXAQHE 496
E+P D +E
Sbjct: 110 REAPSYADQAGGNE 123
Score = 37.5 bits (83), Expect = 0.35
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 133 GKVVAVIGAXVDVQF-EDNLPPILNALEVQNRSPRLVLEVTQHLG 264
G++V +IGA +DV+F D +P I AL+VQ LEV Q LG
Sbjct: 4 GRIVQIIGAVIDVEFPRDAVPSIYEALKVQ--GVETTLEVQQQLG 46
>UniRef50_A6DUD8 Cluster: F0F1 ATP synthase subunit beta; n=1;
Lentisphaera araneosa HTCC2155|Rep: F0F1 ATP synthase
subunit beta - Lentisphaera araneosa HTCC2155
Length = 161
Score = 51.2 bits (117), Expect = 3e-05
Identities = 30/82 (36%), Positives = 40/82 (48%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
VRTIA+D TE L RG V +G+ + P L +N+ G PID + + + IH
Sbjct: 60 VRTIALDSTEGLHRGAVVTDTGAGLKVPVGDEVLGRAMNLLGDPIDNKPVVESSDEWEIH 119
Query: 455 AESPXVVDXXAQHETXVXVIKV 520
E+P D E V IKV
Sbjct: 120 REAPAFADQDTGTEVLVTGIKV 141
Score = 43.2 bits (97), Expect = 0.007
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Frame = +1
Query: 133 GKVVAVIGAXVDVQFE-DNLPPILNALEVQNRS-----PRLVLEVTQHLG 264
GKV+ ++GA +DV+F +P I NAL+V N S LVLEV QHLG
Sbjct: 7 GKVLQIMGAVIDVEFSGGTIPGIFNALKVTNPSINDQEGNLVLEVAQHLG 56
>UniRef50_Q9RQ76 Cluster: Beta subunit of membrane-bound ATP
synthase; n=16; Gammaproteobacteria|Rep: Beta subunit of
membrane-bound ATP synthase - Buchnera aphidicola
Length = 147
Score = 50.8 bits (116), Expect = 4e-05
Identities = 24/45 (53%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +1
Query: 133 GKVVAVIGAXVDVQFEDN-LPPILNALEVQNRSPRLVLEVTQHLG 264
GK+V +IGA +DV+F N +P I NAL VQNR+ +++LEV Q G
Sbjct: 4 GKIVQIIGAVIDVEFPYNSVPKIYNALSVQNRNQKIILEVQQQPG 48
Score = 49.6 bits (113), Expect = 8e-05
Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTD-----K 439
VRTIAM ++ L RG VL G I P TL I+NV G PID +GP+ +
Sbjct: 52 VRTIAMGASDGLSRGLSVLDLGHGIKVPVGISTLGRIVNVLGCPIDMKGPLNNKDGSKIE 111
Query: 440 TAAIHAESPXVVDXXAQHETXVXVIKVXDXLXPYA 544
IH +P + IKV D + P++
Sbjct: 112 HREIHRSAPGYEEQLNSCTILETGIKVIDLICPFS 146
>UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27;
Bacteria|Rep: ATP synthase F1, beta subunit -
Burkholderia mallei (Pseudomonas mallei)
Length = 534
Score = 47.6 bits (108), Expect = 3e-04
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTD-KTAAI 451
VR +A+ T L RG V +G PI P L +++V G P D + D + I
Sbjct: 86 VRALALGPTGGLRRGAAVRATGGPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPI 145
Query: 452 HAESPXVVDXXAQHETXVXVIKVXDXLXPYAXGG 553
H +P + + + + IKV D L P A GG
Sbjct: 146 HRGAPLLAEQKSANALFATGIKVIDLLAPLAQGG 179
Score = 33.9 bits (74), Expect = 4.3
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +1
Query: 124 KGQGKVVAVIGAXVDVQFEDNLPPILN---ALEVQNRSPRLVLEVTQHL 261
+G G+VVAV GA VDV F+ P LN + V +P ++ EV HL
Sbjct: 34 EGAGRVVAVRGAVVDVAFDGGALPALNEALTIPVDGAAP-ILAEVHAHL 81
>UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2;
Amphidinium|Rep: ATP synthase subunit beta - Amphidinium
operculatum (Dinoflagellate)
Length = 548
Score = 46.8 bits (106), Expect = 6e-04
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = +1
Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEM 705
GKT LIMELI N+ +H S +G GER + NDLY EM
Sbjct: 236 GKTVLIMELIRNLAYSHNGLSLFSGIGERSREANDLYVEM 275
>UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1;
Azotobacter vinelandii AvOP|Rep: ATP synthase F1, beta
subunit - Azotobacter vinelandii AvOP
Length = 473
Score = 46.4 bits (105), Expect = 8e-04
Identities = 31/94 (32%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTD-KTAAI 451
VR IA+ T L RG G P+ P L +++V G D P+P D I
Sbjct: 56 VRAIALAATSGLPRGVMARTLGGPLRVPVGEAVLGRLLDVGGVVGDKGPPLPDDVPRRPI 115
Query: 452 HAESPXVVDXXAQHETXVXVIKVXDXLXPYAXGG 553
H P + A E IKV D L P GG
Sbjct: 116 HRSPPPLAAQAATSEPFATGIKVIDLLTPLVQGG 149
Score = 34.7 bits (76), Expect = 2.5
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 118 AGKGQGKVVAVIGAXVDVQFEDNLPPILNALEV-QNRSPRLVLEVTQHL 261
A + +G V AV GA +DV F LPPI +AL + ++ L+ EV HL
Sbjct: 3 AAQLEGLVSAVRGAVIDVTFPAGLPPIGDALAILRDDGEPLLAEVQAHL 51
Score = 32.7 bits (71), Expect = 9.9
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEM 705
GKT L+MELI+ + + + S AG GER + +++ +M
Sbjct: 160 GKTVLVMELIHAMVERYRGISVFAGVGERSREGHEMLLDM 199
>UniRef50_Q1NYL2 Cluster: ATP synthase beta chain; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: ATP
synthase beta chain - Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)
Length = 129
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Frame = +1
Query: 112 KSAGKGQGKVVAVIGAXVDVQFED--NLPPILNALEVQN-RSPRLVLEVTQHLGXNTCSD 282
K K +GK++ +IG +DV FE+ +LP I ++LEV N + +++LEV QH+G C+
Sbjct: 4 KMINKVKGKIIQIIGPVIDVLFENVSSLPMIYDSLEVFNPKGNQIILEVQQHIG--ECTV 61
Query: 283 HC 288
C
Sbjct: 62 RC 63
Score = 42.3 bits (95), Expect = 0.012
Identities = 24/64 (37%), Positives = 30/64 (46%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
VR I+MD T+ L RGQ V G+ I P + NV G ID G + K +IH
Sbjct: 61 VRCISMDITDGLKRGQDVFSLGTTISMPIGEEINGRVFNVVGNTIDGLGDLNNSKRISIH 120
Query: 455 AESP 466
P
Sbjct: 121 RNPP 124
>UniRef50_A6PZL5 Cluster: ATP synthase subunit alpha; n=4;
Leuconostocaceae|Rep: ATP synthase subunit alpha -
Leuconostoc durionis
Length = 297
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/94 (27%), Positives = 41/94 (43%)
Frame = +2
Query: 269 THVRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAA 448
+ V I + +E + G V +G + P + ++N G PID G + T KT
Sbjct: 32 SEVGIIVLGSSEGIREGDTVKRTGHVMEVPVGEELIGRVVNALGQPIDGLGDLNTTKTRP 91
Query: 449 IHAESPXVVDXXAQHETXVXVIKVXDXLXPYAXG 550
+ A++P V+ + E IK D L P G
Sbjct: 92 VEAKAPGVMARKSVSEPLQTGIKAIDALVPIGRG 125
>UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47;
Bacteria|Rep: ATP synthase subunit alpha - Mycobacterium
leprae
Length = 558
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/93 (26%), Positives = 40/93 (43%)
Frame = +2
Query: 272 HVRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAI 451
+V + + E + GQ V +G + P + ++N G PID RG I + A+
Sbjct: 73 NVGAVILGDFENIKEGQKVKRTGDVLSVPVGEAFMGRVVNPLGQPIDGRGDIEAEARRAL 132
Query: 452 HAESPXVVDXXAQHETXVXVIKVXDXLXPYAXG 550
++P VV + E IK D + P G
Sbjct: 133 ELQAPSVVQRQSVKEPLQTGIKAIDAMTPIGRG 165
>UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellular
organisms|Rep: ATP synthase subunit alpha - Rhodococcus
sp. (strain RHA1)
Length = 547
Score = 44.0 bits (99), Expect = 0.004
Identities = 25/94 (26%), Positives = 41/94 (43%)
Frame = +2
Query: 269 THVRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAA 448
T + + + E + GQ V +G + P L +IN G PID G I +++T A
Sbjct: 72 TEIGAVILGDYENIQEGQEVKRTGDVLSVPVGDAFLGRVINPLGQPIDGLGEIESNETRA 131
Query: 449 IHAESPXVVDXXAQHETXVXVIKVXDXLXPYAXG 550
+ ++ V++ E IK D + P G
Sbjct: 132 LELQAASVLERQPVEEPLQTGIKAIDAMTPIGRG 165
>UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1;
Paramecium tetraurelia|Rep: ATP synthase subunit alpha -
Paramecium tetraurelia
Length = 612
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/93 (22%), Positives = 39/93 (41%)
Frame = +2
Query: 272 HVRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAI 451
+V + + + G V +G+ + P L + + G PID GP+ T+ +
Sbjct: 93 NVGIVVLGNDREIQEGDIVKRTGAIVDVPIGMEMLGRVFDALGNPIDGHGPVKTNTRRRV 152
Query: 452 HAESPXVVDXXAQHETXVXVIKVXDXLXPYAXG 550
++P ++ + HE +K D L P G
Sbjct: 153 ELKAPGIIPRKSVHEPMQTGLKAVDCLVPIGRG 185
>UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3;
Legionella pneumophila|Rep: ATP synthase F1, beta chain
- Legionella pneumophila (strain Corby)
Length = 474
Score = 42.7 bits (96), Expect = 0.009
Identities = 26/93 (27%), Positives = 38/93 (40%)
Frame = +2
Query: 272 HVRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAI 451
HVR I + L RG V G+ + P L ++N+ G P+D P+ T + +
Sbjct: 70 HVRAITLHRASGLQRGLIVYDQGTSLRIPVSKECLGRLLNIFGEPLDGAPPLETHEYRDV 129
Query: 452 HAESPXVVDXXAQHETXVXVIKVXDXLXPYAXG 550
A + Q IKV D L P+ G
Sbjct: 130 LANFAPLEMTSTQETILETGIKVIDLLCPFVRG 162
Score = 37.5 bits (83), Expect = 0.35
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +1
Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEM 705
GKT L+MEL++ + Q H S AG GER + ++L+ EM
Sbjct: 174 GKTVLLMELMHAIIQLHQGTSVFAGVGERIREGHELWHEM 213
>UniRef50_Q35058 Cluster: AtpA intron2 ORF; n=8; Embryophyta|Rep:
AtpA intron2 ORF - Marchantia polymorpha (Liverwort)
Length = 1259
Score = 40.7 bits (91), Expect = 0.037
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +2
Query: 284 IAMDGTECLVR-GQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIHAE 460
I + G++ ++ G V +GS + P L +++ G PID +G + + + +
Sbjct: 74 IVIFGSDTAIKEGDIVKRTGSIVDVPVGKGMLGRVVDALGVPIDGKGALSAVERRRVEVK 133
Query: 461 SPXVVDXXAQHETXVXVIKVXDXLXPYAXG 550
+P ++ + HE +K D L P G
Sbjct: 134 APGIIARKSVHEPMQTGLKAVDSLVPIGRG 163
>UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2;
Firmicutes|Rep: ATP synthase subunit alpha -
Ruminococcus albus
Length = 523
Score = 38.7 bits (86), Expect = 0.15
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +2
Query: 296 GTECLVR-GQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIHAESPXV 472
GTE +R G V +G + P L ++N G PID +G I T++T + + + +
Sbjct: 77 GTEEGIREGSNVKRTGRIVSVPVGEAMLGRVVNALGAPIDGKGAILTNETRPVESPAFGI 136
Query: 473 VDXXAQHETXVXVIKVXDXLXPYAXG 550
+ + + IK D + P G
Sbjct: 137 ITRKSVNRPLQTGIKAIDSMIPVGRG 162
>UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100;
cellular organisms|Rep: ATP synthase subunit alpha 1 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 511
Score = 37.9 bits (84), Expect = 0.26
Identities = 23/86 (26%), Positives = 37/86 (43%)
Frame = +2
Query: 293 DGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIHAESPXV 472
DG + + G VL + S + P L +++ G PID RGP+ + ++P +
Sbjct: 79 DG-DSIREGDTVLRTKSVVEVPVGKGLLGRVVDGLGNPIDGRGPLTDVEYRRAEVKAPGI 137
Query: 473 VDXXAQHETXVXVIKVXDXLXPYAXG 550
+ + E IK D L P G
Sbjct: 138 MPRQSVSEPMQTGIKAIDALVPIGRG 163
>UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n=1;
Opitutaceae bacterium TAV2|Rep: Flagellar protein export
ATPase FliI - Opitutaceae bacterium TAV2
Length = 461
Score = 36.3 bits (80), Expect = 0.81
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +2
Query: 365 AXTLXXIINVXGXPIDXRGPIPTDKTAAIHAESPXVVDXXAQHETXVXVIKVXDXLXPYA 544
A L +++ G P D GP+PT + A+H+ P + E ++ D P
Sbjct: 114 AQLLGRVLDALGRPFDGAGPVPTRRVDAVHSRPPHPLRRQRIREALPTGVRALDAFTPLG 173
Query: 545 XG 550
G
Sbjct: 174 RG 175
>UniRef50_Q603U2 Cluster: ATP synthase subunit alpha 2; n=6;
Proteobacteria|Rep: ATP synthase subunit alpha 2 -
Methylococcus capsulatus
Length = 503
Score = 35.5 bits (78), Expect = 1.4
Identities = 19/92 (20%), Positives = 36/92 (39%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
+ + + +E L G P +G + P L +I+ G P+D P+ T +
Sbjct: 80 IGAVLLHQSENLTAGTPARLAGRTLDVPVGETLLGRVIDPIGNPLDGGRPLETRNRRPLD 139
Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXG 550
+ SP ++ + ++ D L P G
Sbjct: 140 SPSPPIIARDFVQQPLYTGTRLVDTLVPIGKG 171
>UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasma
mobile|Rep: ATP synthase beta chain - Mycoplasma mobile
Length = 784
Score = 33.5 bits (73), Expect = 5.7
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXE 702
GKT ++ ELIN + H S AG GER + ++L+ E
Sbjct: 457 GKTVIVQELINAFIKFHDGVSVFAGIGERIREGHELWKE 495
>UniRef50_A7DHD2 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 945
Score = 33.1 bits (72), Expect = 7.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 708 NHLXV*IISVRXTLSXSSNPRVTTMGLANIVDQFHNQXSFA 586
+HL V I+++ L+ + RV + L ++VDQ H+Q A
Sbjct: 374 DHLVVEIVTLAGALADAGEDRVARVNLGDVVDQLHDQHGLA 414
>UniRef50_Q2LAJ4 Cluster: Auxin response factor 3; n=2; core
eudicotyledons|Rep: Auxin response factor 3 - Solanum
lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 747
Score = 33.1 bits (72), Expect = 7.5
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 271 CXHPNVGLPQVRGGEIDFAPQGHLESEAGYLRIA-HLPQH 155
C P + LP+ +G + + PQGHLE + Y IA +LP H
Sbjct: 60 CAGPLISLPK-KGSAVVYLPQGHLEHLSEYPSIACNLPPH 98
>UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasma
pulmonis|Rep: ATP SYNTHASE BETA CHAIN - Mycoplasma
pulmonis
Length = 698
Score = 32.7 bits (71), Expect = 9.9
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXE 702
GKT ++ ELIN + H S +G GER + ++L+ E
Sbjct: 369 GKTVVVQELINTFIKHHDGVSVFSGIGERIREGHELWEE 407
>UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=10; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Thermoanaerobacter tengcongensis
Length = 437
Score = 32.7 bits (71), Expect = 9.9
Identities = 19/81 (23%), Positives = 33/81 (40%)
Frame = +2
Query: 317 GQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIHAESPXVVDXXAQHE 496
G V+ +G + L +++ G PID +GP+ +K+ ++ P ++ E
Sbjct: 82 GSKVIATGQTLKVNVGKSLLGRVLDGLGNPIDGKGPLKYEKSIPVNNTPPDPLERKRIRE 141
Query: 497 TXVXVIKVXDXLXPYAXGGXI 559
IK D L G I
Sbjct: 142 VMPLGIKAIDGLLTCGKGQRI 162
>UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1;
Symbiobacterium thermophilum|Rep: Flagellar-specific ATP
synthase - Symbiobacterium thermophilum
Length = 436
Score = 32.7 bits (71), Expect = 9.9
Identities = 22/87 (25%), Positives = 34/87 (39%)
Frame = +2
Query: 299 TECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIHAESPXVVD 478
T+ L G V+ +G P+ P L +I+ G PID +GP+ I +P +
Sbjct: 72 TDGLRPGWDVIATGGPLQAPVGMGLLGRVIDGLGNPIDDKGPLMGCGFRPILGPAPDPLA 131
Query: 479 XXAQHETXVXVIKVXDXLXPYAXGGXI 559
H ++ D L G I
Sbjct: 132 RQRIHRPLSLGVRALDALITVGMGQRI 158
>UniRef50_Q2IVE8 Cluster: Peptidase S15; n=1; Rhodopseudomonas
palustris HaA2|Rep: Peptidase S15 - Rhodopseudomonas
palustris (strain HaA2)
Length = 560
Score = 32.7 bits (71), Expect = 9.9
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -2
Query: 341 SQSIVRVAHGLSIQYRPWQWSEHVXSP---KCWVTSSTRRGDRFCTSRAFRIGGR 186
S + V + G++ RP+ + P + W+ SST D F T R FR GR
Sbjct: 376 SSTFVAMGDGVTFLTRPFDQATEFTGPVTARLWIASSTPDADIFATLRLFRPDGR 430
>UniRef50_A7QPQ9 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 737
Score = 32.7 bits (71), Expect = 9.9
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 271 CXHPNVGLPQVRGGEIDFAPQGHLESEAGYLRIAH-LPQH 155
C P + LP+ +G + + PQGHLE + Y +A+ LP H
Sbjct: 51 CAGPLISLPK-KGSLVVYFPQGHLEQLSDYPAVAYDLPPH 89
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,027,156
Number of Sequences: 1657284
Number of extensions: 9092836
Number of successful extensions: 17891
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 17528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17880
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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