Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0034
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X03559-1|CAA27246.1| 539|Homo sapiens protein ( Human mRNA for ... 105 2e-22
M27132-1|AAA51809.1| 529|Homo sapiens ATP synthase beta subunit... 105 2e-22
D00022-1|BAA00016.1| 539|Homo sapiens F1 beta subunit protein. 105 2e-22
DQ403107-1|ABD77240.1| 445|Homo sapiens mitochondrial ATP synth... 105 2e-22
BC016512-1|AAH16512.1| 529|Homo sapiens ATP synthase, H+ transp... 105 2e-22
M19483-1|AAA51808.1| 529|Homo sapiens ATPSB protein. 100 5e-21
X05606-1|CAA29095.1| 312|Homo sapiens beta-subunit (AA 1-312) p... 50 1e-05
>X03559-1|CAA27246.1| 539|Homo sapiens protein ( Human mRNA for
F1-ATPase beta subunit (F-1 beta). ).
Length = 539
Score = 105 bits (251), Expect = 2e-22
Identities = 55/95 (57%), Positives = 62/95 (65%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
VRTIAMDGTE LVRGQ VL SG+PI P TL I+NV G PID RGPI T + A IH
Sbjct: 118 VRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIH 177
Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
AE+P ++ + E V IKV D L PYA GG I
Sbjct: 178 AEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKI 212
Score = 82.6 bits (195), Expect = 1e-15
Identities = 44/80 (55%), Positives = 56/80 (70%), Gaps = 5/80 (6%)
Frame = +1
Query: 49 PFQNVEKSLQSMPLTSRDYAAKS-----AGKGQGKVVAVIGAXVDVQFEDNLPPILNALE 213
P Q + ++++ RDYAA++ AG G++VAVIGA VDVQF++ LPPILNALE
Sbjct: 38 PAQLLLRAVRRRSHPVRDYAAQTSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALE 97
Query: 214 VQNRSPRLVLEVTQHLGXNT 273
VQ R RLVLEV QHLG +T
Sbjct: 98 VQGRETRLVLEVAQHLGEST 117
Score = 60.9 bits (141), Expect = 5e-09
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = +1
Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEMI 708
GKT LIMELINNV +AHG YS AG GER + NDLY EMI
Sbjct: 221 GKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI 261
>M27132-1|AAA51809.1| 529|Homo sapiens ATP synthase beta subunit
precursor protein.
Length = 529
Score = 105 bits (251), Expect = 2e-22
Identities = 55/95 (57%), Positives = 62/95 (65%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
VRTIAMDGTE LVRGQ VL SG+PI P TL I+NV G PID RGPI T + A IH
Sbjct: 108 VRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIH 167
Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
AE+P ++ + E V IKV D L PYA GG I
Sbjct: 168 AEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKI 202
Score = 82.2 bits (194), Expect = 2e-15
Identities = 42/64 (65%), Positives = 49/64 (76%), Gaps = 5/64 (7%)
Frame = +1
Query: 97 RDYAAKS-----AGKGQGKVVAVIGAXVDVQFEDNLPPILNALEVQNRSPRLVLEVTQHL 261
RDYAA++ AG G++VAVIGA VDVQF++ LPPILNALEVQ R RLVLEV QHL
Sbjct: 44 RDYAAQTSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHL 103
Query: 262 GXNT 273
G +T
Sbjct: 104 GEST 107
Score = 60.9 bits (141), Expect = 5e-09
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = +1
Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEMI 708
GKT LIMELINNV +AHG YS AG GER + NDLY EMI
Sbjct: 211 GKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI 251
>D00022-1|BAA00016.1| 539|Homo sapiens F1 beta subunit protein.
Length = 539
Score = 105 bits (251), Expect = 2e-22
Identities = 55/95 (57%), Positives = 62/95 (65%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
VRTIAMDGTE LVRGQ VL SG+PI P TL I+NV G PID RGPI T + A IH
Sbjct: 118 VRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIH 177
Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
AE+P ++ + E V IKV D L PYA GG I
Sbjct: 178 AEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKI 212
Score = 82.6 bits (195), Expect = 1e-15
Identities = 44/80 (55%), Positives = 56/80 (70%), Gaps = 5/80 (6%)
Frame = +1
Query: 49 PFQNVEKSLQSMPLTSRDYAAKS-----AGKGQGKVVAVIGAXVDVQFEDNLPPILNALE 213
P Q + ++++ RDYAA++ AG G++VAVIGA VDVQF++ LPPILNALE
Sbjct: 38 PAQLLLRAVRRRSHPVRDYAAQTSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALE 97
Query: 214 VQNRSPRLVLEVTQHLGXNT 273
VQ R RLVLEV QHLG +T
Sbjct: 98 VQGRETRLVLEVAQHLGEST 117
Score = 60.9 bits (141), Expect = 5e-09
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = +1
Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEMI 708
GKT LIMELINNV +AHG YS AG GER + NDLY EMI
Sbjct: 221 GKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI 261
>DQ403107-1|ABD77240.1| 445|Homo sapiens mitochondrial ATP
synthase, H+ transporting F1 complex beta subunit
protein.
Length = 445
Score = 105 bits (251), Expect = 2e-22
Identities = 55/95 (57%), Positives = 62/95 (65%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
VRTIAMDGTE LVRGQ VL SG+PI P TL I+NV G PID RGPI T + A IH
Sbjct: 44 VRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIH 103
Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
AE+P ++ + E V IKV D L PYA GG I
Sbjct: 104 AEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKI 138
Score = 69.3 bits (162), Expect = 1e-11
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = +1
Query: 145 AVIGAXVDVQFEDNLPPILNALEVQNRSPRLVLEVTQHLGXNT 273
AVIGA VDVQF++ LPPILNALEVQ R RLVLEV QHLG +T
Sbjct: 1 AVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGEST 43
Score = 60.9 bits (141), Expect = 5e-09
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = +1
Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEMI 708
GKT LIMELINNV +AHG YS AG GER + NDLY EMI
Sbjct: 147 GKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI 187
>BC016512-1|AAH16512.1| 529|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, beta polypeptide
protein.
Length = 529
Score = 105 bits (251), Expect = 2e-22
Identities = 55/95 (57%), Positives = 62/95 (65%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
VRTIAMDGTE LVRGQ VL SG+PI P TL I+NV G PID RGPI T + A IH
Sbjct: 108 VRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIH 167
Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
AE+P ++ + E V IKV D L PYA GG I
Sbjct: 168 AEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKI 202
Score = 82.2 bits (194), Expect = 2e-15
Identities = 42/64 (65%), Positives = 49/64 (76%), Gaps = 5/64 (7%)
Frame = +1
Query: 97 RDYAAKS-----AGKGQGKVVAVIGAXVDVQFEDNLPPILNALEVQNRSPRLVLEVTQHL 261
RDYAA++ AG G++VAVIGA VDVQF++ LPPILNALEVQ R RLVLEV QHL
Sbjct: 44 RDYAAQTSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHL 103
Query: 262 GXNT 273
G +T
Sbjct: 104 GEST 107
Score = 60.9 bits (141), Expect = 5e-09
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = +1
Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEMI 708
GKT LIMELINNV +AHG YS AG GER + NDLY EMI
Sbjct: 211 GKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI 251
>M19483-1|AAA51808.1| 529|Homo sapiens ATPSB protein.
Length = 529
Score = 100 bits (240), Expect = 5e-21
Identities = 53/95 (55%), Positives = 60/95 (63%)
Frame = +2
Query: 275 VRTIAMDGTECLVRGQPVLYSGSPIXXPXXAXTLXXIINVXGXPIDXRGPIPTDKTAAIH 454
VRTIAMDGTE LVRGQ VL SG + P TL I+NV G PID RGPI T + A IH
Sbjct: 108 VRTIAMDGTEGLVRGQKVLDSGDQLKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIH 167
Query: 455 AESPXVVDXXAQHETXVXVIKVXDXLXPYAXGGXI 559
AE+P ++ + E V IKV D L PYA GG I
Sbjct: 168 AEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKI 202
Score = 82.2 bits (194), Expect = 2e-15
Identities = 42/64 (65%), Positives = 49/64 (76%), Gaps = 5/64 (7%)
Frame = +1
Query: 97 RDYAAKS-----AGKGQGKVVAVIGAXVDVQFEDNLPPILNALEVQNRSPRLVLEVTQHL 261
RDYAA++ AG G++VAVIGA VDVQF++ LPPILNALEVQ R RLVLEV QHL
Sbjct: 44 RDYAAQTSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHL 103
Query: 262 GXNT 273
G +T
Sbjct: 104 GEST 107
Score = 60.9 bits (141), Expect = 5e-09
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = +1
Query: 586 GKTXLIMELINNVCQAHGXYSGIAGXGERPPDRNDLYXEMI 708
GKT LIMELINNV +AHG YS AG GER + NDLY EMI
Sbjct: 211 GKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI 251
>X05606-1|CAA29095.1| 312|Homo sapiens beta-subunit (AA 1-312)
protein.
Length = 312
Score = 49.6 bits (113), Expect = 1e-05
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = +1
Query: 607 ELINNVCQAHGXYSGIAGXGERPPDRNDLYXEMI 708
ELINNV +AHG YS AG GER + NDLY EMI
Sbjct: 1 ELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI 34
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,778,694
Number of Sequences: 237096
Number of extensions: 1538073
Number of successful extensions: 2493
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2493
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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