Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0032
(550 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M16696-1|AAA51764.1| 189|Homo sapiens APOD protein. 68 2e-11
J02611-1|AAB59517.1| 189|Homo sapiens APOD protein. 68 2e-11
CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein. 68 2e-11
CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein. 68 2e-11
BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein. 68 2e-11
BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein. 68 2e-11
BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein. 68 2e-11
BC105119-1|AAI05120.1| 142|Homo sapiens cystatin 8 (cystatin-re... 31 2.7
BC105113-1|AAI05114.1| 142|Homo sapiens cystatin 8, precursor p... 31 2.7
BC069496-1|AAH69496.1| 142|Homo sapiens cystatin 8 (cystatin-re... 31 2.7
AL109954-3|CAB64234.1| 142|Homo sapiens cystatin 8 (cystatin-re... 31 2.7
AL109954-2|CAM28236.1| 134|Homo sapiens cystatin 8 (cystatin-re... 31 2.7
AF059244-1|AAC14707.1| 142|Homo sapiens cystatin-related epidid... 31 2.7
>M16696-1|AAA51764.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 68.1 bits (159), Expect = 2e-11
Identities = 52/147 (35%), Positives = 61/147 (41%), Gaps = 2/147 (1%)
Frame = +2
Query: 8 LLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGD 184
L AA + H G CP NF++ Y G WYEI K P E NG+C A Y L E
Sbjct: 14 LFGAAEGQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENG 72
Query: 185 VVKVKNVHI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVXILATXXXXXX 361
+KV N + DG IEG A + + AKL V KF ILAT
Sbjct: 73 KIKVLNQELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYA 129
Query: 362 XXXXXXXXXEKKSHQVFXWILXRNKKL 442
+ H F WIL RN L
Sbjct: 130 LVYSCTCIIQ-LFHVDFAWILARNPNL 155
>J02611-1|AAB59517.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 68.1 bits (159), Expect = 2e-11
Identities = 52/147 (35%), Positives = 61/147 (41%), Gaps = 2/147 (1%)
Frame = +2
Query: 8 LLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGD 184
L AA + H G CP NF++ Y G WYEI K P E NG+C A Y L E
Sbjct: 14 LFGAAEGQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENG 72
Query: 185 VVKVKNVHI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVXILATXXXXXX 361
+KV N + DG IEG A + + AKL V KF ILAT
Sbjct: 73 KIKVLNQELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYA 129
Query: 362 XXXXXXXXXEKKSHQVFXWILXRNKKL 442
+ H F WIL RN L
Sbjct: 130 LVYSCTCIIQ-LFHVDFAWILARNPNL 155
>CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 68.1 bits (159), Expect = 2e-11
Identities = 52/147 (35%), Positives = 61/147 (41%), Gaps = 2/147 (1%)
Frame = +2
Query: 8 LLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGD 184
L AA + H G CP NF++ Y G WYEI K P E NG+C A Y L E
Sbjct: 14 LFGAAEGQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENG 72
Query: 185 VVKVKNVHI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVXILATXXXXXX 361
+KV N + DG IEG A + + AKL V KF ILAT
Sbjct: 73 KIKVLNQELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYA 129
Query: 362 XXXXXXXXXEKKSHQVFXWILXRNKKL 442
+ H F WIL RN L
Sbjct: 130 LVYSCTCIIQ-LFHVDFAWILARNPNL 155
>CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 68.1 bits (159), Expect = 2e-11
Identities = 52/147 (35%), Positives = 61/147 (41%), Gaps = 2/147 (1%)
Frame = +2
Query: 8 LLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGD 184
L AA + H G CP NF++ Y G WYEI K P E NG+C A Y L E
Sbjct: 14 LFGAAEGQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENG 72
Query: 185 VVKVKNVHI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVXILATXXXXXX 361
+KV N + DG IEG A + + AKL V KF ILAT
Sbjct: 73 KIKVLNQELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYA 129
Query: 362 XXXXXXXXXEKKSHQVFXWILXRNKKL 442
+ H F WIL RN L
Sbjct: 130 LVYSCTCIIQ-LFHVDFAWILARNPNL 155
>BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 68.1 bits (159), Expect = 2e-11
Identities = 52/147 (35%), Positives = 61/147 (41%), Gaps = 2/147 (1%)
Frame = +2
Query: 8 LLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGD 184
L AA + H G CP NF++ Y G WYEI K P E NG+C A Y L E
Sbjct: 14 LFGAAEGQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENG 72
Query: 185 VVKVKNVHI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVXILATXXXXXX 361
+KV N + DG IEG A + + AKL V KF ILAT
Sbjct: 73 KIKVLNQELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYA 129
Query: 362 XXXXXXXXXEKKSHQVFXWILXRNKKL 442
+ H F WIL RN L
Sbjct: 130 LVYSCTCIIQ-LFHVDFAWILARNPNL 155
>BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 68.1 bits (159), Expect = 2e-11
Identities = 52/147 (35%), Positives = 61/147 (41%), Gaps = 2/147 (1%)
Frame = +2
Query: 8 LLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGD 184
L AA + H G CP NF++ Y G WYEI K P E NG+C A Y L E
Sbjct: 14 LFGAAEGQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENG 72
Query: 185 VVKVKNVHI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVXILATXXXXXX 361
+KV N + DG IEG A + + AKL V KF ILAT
Sbjct: 73 KIKVLNQELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYA 129
Query: 362 XXXXXXXXXEKKSHQVFXWILXRNKKL 442
+ H F WIL RN L
Sbjct: 130 LVYSCTCIIQ-LFHVDFAWILARNPNL 155
>BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 68.1 bits (159), Expect = 2e-11
Identities = 52/147 (35%), Positives = 61/147 (41%), Gaps = 2/147 (1%)
Frame = +2
Query: 8 LLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESEKNGKCSSAEYKL-EGD 184
L AA + H G CP NF++ Y G WYEI K P E NG+C A Y L E
Sbjct: 14 LFGAAEGQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFE-NGRCIQANYSLMENG 72
Query: 185 VVKVKNVHI-IDGVKKYIEGTAKLTDDANKAAKLTVTFKFGEISRDGSVXILATXXXXXX 361
+KV N + DG IEG A + + AKL V KF ILAT
Sbjct: 73 KIKVLNQELRADGTVNQIEGEATPV-NLTEPAKLEV--KFSWFMPSAPYWILATDYENYA 129
Query: 362 XXXXXXXXXEKKSHQVFXWILXRNKKL 442
+ H F WIL RN L
Sbjct: 130 LVYSCTCIIQ-LFHVDFAWILARNPNL 155
>BC105119-1|AAI05120.1| 142|Homo sapiens cystatin 8
(cystatin-related epididymal specific) protein.
Length = 142
Score = 31.1 bits (67), Expect = 2.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 2 LTLLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESE 139
L L+A + G +LKPVN N Q +W+ + ++ ESE
Sbjct: 16 LALVARKDPKKNETGVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>BC105113-1|AAI05114.1| 142|Homo sapiens cystatin 8, precursor
protein.
Length = 142
Score = 31.1 bits (67), Expect = 2.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 2 LTLLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESE 139
L L+A + G +LKPVN N Q +W+ + ++ ESE
Sbjct: 16 LALVARKDPKKNETGVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>BC069496-1|AAH69496.1| 142|Homo sapiens cystatin 8
(cystatin-related epididymal specific) protein.
Length = 142
Score = 31.1 bits (67), Expect = 2.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 2 LTLLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESE 139
L L+A + G +LKPVN N Q +W+ + ++ ESE
Sbjct: 16 LALVARKDPKKNETGVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>AL109954-3|CAB64234.1| 142|Homo sapiens cystatin 8
(cystatin-related epididymal specific) protein.
Length = 142
Score = 31.1 bits (67), Expect = 2.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 2 LTLLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESE 139
L L+A + G +LKPVN N Q +W+ + ++ ESE
Sbjct: 16 LALVARKDPKKNETGVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>AL109954-2|CAM28236.1| 134|Homo sapiens cystatin 8
(cystatin-related epididymal specific) protein.
Length = 134
Score = 31.1 bits (67), Expect = 2.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 2 LTLLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESE 139
L L+A + G +LKPVN N Q +W+ + ++ ESE
Sbjct: 16 LALVARKDPKKNETGVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
>AF059244-1|AAC14707.1| 142|Homo sapiens cystatin-related
epididymal spermatogenic protein protein.
Length = 142
Score = 31.1 bits (67), Expect = 2.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 2 LTLLAAATAEVIHEGTCPELKPVNNFNLTAYQGIWYEISKFPNESE 139
L L+A + G +LKPVN N Q +W+ + ++ ESE
Sbjct: 16 LALVARKDPKKNETGVLRKLKPVNASNANVKQCLWFAMQEYNKESE 61
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,267,295
Number of Sequences: 237096
Number of extensions: 994184
Number of successful extensions: 1683
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1683
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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