Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0023
         (600 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    25   0.75 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    25   0.75 
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    25   0.75 
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   4.0  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    22   4.0  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   5.3  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +1

Query: 97  WIIYYLHHTL-SEHG*IITLFPWT 165
           W  YY++HTL +E    +TL  WT
Sbjct: 172 WDYYYIYHTLVAEQSYGLTLPSWT 195


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +1

Query: 97  WIIYYLHHTL-SEHG*IITLFPWT 165
           W  YY++HTL +E    +TL  WT
Sbjct: 187 WDYYYIYHTLVAEQSYGLTLPSWT 210


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +1

Query: 97  WIIYYLHHTL-SEHG*IITLFPWT 165
           W  YY++HTL +E    +TL  WT
Sbjct: 75  WDYYYIYHTLVAEQSYGLTLPSWT 98


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 286 KLSLFYCDIPPGIKILSD 233
           K  L  C  P G+K+LSD
Sbjct: 56  KSPLLSCACPDGLKLLSD 73


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 286 KLSLFYCDIPPGIKILSD 233
           K  L  C  P G+K+LSD
Sbjct: 56  KSPLLSCACPDGLKLLSD 73


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -3

Query: 379 INFKVPKLKPNMNLAMIM 326
           +NF +P+L+ N+N+ + M
Sbjct: 312 VNFALPELQHNLNILVDM 329


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,967
Number of Sequences: 438
Number of extensions: 3000
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)