Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0021
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...    25   2.5  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    25   3.3  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    24   5.8  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    24   5.8  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    24   5.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   7.6  

>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 422 YGEGSRRARRCHREHGL 472
           YG+GSR  R C   HG+
Sbjct: 14  YGQGSRFWRACSNNHGM 30


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +2

Query: 83  IDNGRGFRHRLS--V*RRIIKTRC*GFLMRHRFGARGTSNRKAR 208
           I   R  R +L+  V RR  + +  G L R+R+GA+    R AR
Sbjct: 50  ISTKRQIREQLARTVHRRATRAKSIGLLRRYRYGAKRYVARAAR 93


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +3

Query: 84  LITGAASGIGLAYSEELLKQGAKVSLCD 167
           ++ G  SG GLA +++ ++ GAKV++ D
Sbjct: 41  VVIGGGSG-GLACAKQAVQLGAKVAVLD 67


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +3

Query: 84  LITGAASGIGLAYSEELLKQGAKVSLCD 167
           ++ G  SG GLA +++ ++ GAKV++ D
Sbjct: 17  VVIGGGSG-GLACAKQAVQLGAKVAVLD 43


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +3

Query: 84  LITGAASGIGLAYSEELLKQGAKVSLCD 167
           ++ G  SG GLA +++ ++ GAKV++ D
Sbjct: 14  VVIGGGSG-GLACAKQAVQLGAKVAVLD 40


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 428  EGSRRARRCHREHGLYSICETSSV 499
            +G+R A   H  H L+  C  SSV
Sbjct: 1862 DGTRSAIHMHAAHSLFPSCLCSSV 1885


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 788,065
Number of Sequences: 2352
Number of extensions: 16004
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)