Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0020
         (800 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23646-9|AAM48529.1|  379|Caenorhabditis elegans Hypothetical pr...    28   6.8  
L23646-8|AAM48530.1|  411|Caenorhabditis elegans Hypothetical pr...    28   6.8  
L23646-7|AAA28038.3|  471|Caenorhabditis elegans Hypothetical pr...    28   6.8  
L23646-6|AAU87821.1|  469|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z99281-26|CAE18029.1|  377|Caenorhabditis elegans Hypothetical p...    28   8.9  

>L23646-9|AAM48529.1|  379|Caenorhabditis elegans Hypothetical
           protein F44E2.7b protein.
          Length = 379

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +1

Query: 532 ESGEDDGQYXPPQGEDDGLYRPEVXDRELLSGAHSLNIAASGNRLXEERKK 684
           E GE   Q   P+GE     R E   RE+ S +    + A   ++ EE KK
Sbjct: 120 EVGESSEQLAKPEGEKRKRRRTESRWREIESDSDKPEVTALVKKILEESKK 170


>L23646-8|AAM48530.1|  411|Caenorhabditis elegans Hypothetical
           protein F44E2.7c protein.
          Length = 411

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +1

Query: 532 ESGEDDGQYXPPQGEDDGLYRPEVXDRELLSGAHSLNIAASGNRLXEERKK 684
           E GE   Q   P+GE     R E   RE+ S +    + A   ++ EE KK
Sbjct: 152 EVGESSEQLAKPEGEKRKRRRTESRWREIESDSDKPEVTALVKKILEESKK 202


>L23646-7|AAA28038.3|  471|Caenorhabditis elegans Hypothetical
           protein F44E2.7a protein.
          Length = 471

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +1

Query: 532 ESGEDDGQYXPPQGEDDGLYRPEVXDRELLSGAHSLNIAASGNRLXEERKK 684
           E GE   Q   P+GE     R E   RE+ S +    + A   ++ EE KK
Sbjct: 212 EVGESSEQLAKPEGEKRKRRRTESRWREIESDSDKPEVTALVKKILEESKK 262


>L23646-6|AAU87821.1|  469|Caenorhabditis elegans Hypothetical
           protein F44E2.7d protein.
          Length = 469

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +1

Query: 532 ESGEDDGQYXPPQGEDDGLYRPEVXDRELLSGAHSLNIAASGNRLXEERKK 684
           E GE   Q   P+GE     R E   RE+ S +    + A   ++ EE KK
Sbjct: 210 EVGESSEQLAKPEGEKRKRRRTESRWREIESDSDKPEVTALVKKILEESKK 260


>Z99281-26|CAE18029.1|  377|Caenorhabditis elegans Hypothetical
           protein Y57G11C.46 protein.
          Length = 377

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 664 ICYHWLQYSKNALQTEAL 611
           ICYHW  +SKN + T  +
Sbjct: 182 ICYHWSDFSKNRVCTHCI 199


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.316    0.133    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,052,627
Number of Sequences: 27780
Number of extensions: 235429
Number of successful extensions: 532
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)