Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0019
(800 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58766-1|AAC50786.1| 321|Homo sapiens FX protein. 256 5e-68
BC093061-1|AAH93061.1| 321|Homo sapiens TSTA3 protein protein. 256 5e-68
BC001941-1|AAH01941.1| 321|Homo sapiens tissue specific transpl... 256 5e-68
BC019670-1|AAH19670.1| 383|Homo sapiens HSPC105 protein protein. 38 0.056
BC033675-1|AAH33675.1| 350|Homo sapiens TDP-glucose 4,6-dehydra... 33 1.2
BC005284-1|AAH05284.1| 316|Homo sapiens Unknown (protein for IM... 33 1.2
AY544125-1|AAT11156.1| 350|Homo sapiens growth-inhibiting prote... 33 1.2
AL359708-1|CAI12411.1| 350|Homo sapiens TDP-glucose 4,6-dehydra... 33 1.2
AL139318-1|CAI12084.1| 350|Homo sapiens TDP-glucose 4,6-dehydra... 33 1.2
AJ006068-1|CAA06840.1| 350|Homo sapiens dTDP-D-glucose 4,6-dehy... 33 1.2
AF048686-1|AAD50061.1| 350|Homo sapiens dTDP-glucose 4,6-dehydr... 33 1.2
>U58766-1|AAC50786.1| 321|Homo sapiens FX protein.
Length = 321
Score = 256 bits (628), Expect = 5e-68
Identities = 111/167 (66%), Positives = 133/167 (79%)
Frame = +2
Query: 194 ETWIFSGSKDGDLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSIND 373
E W+F SKD DL D QT ALF K +PTHVIHLAAMVGGLF N+ +NLDF+R+N+ +ND
Sbjct: 36 EDWVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMND 95
Query: 374 NILQACHKYNVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNR 553
N+L + + +KVVSCLSTCIFPDKTTYPIDETM+HNGPPH+SNFGYSYAKRMIDV NR
Sbjct: 96 NVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNR 155
Query: 554 GYNESYGCMFTSVIPCNVFGPHDNFSLKSSHVIPALIRRMDDAMQKG 694
Y + YGC FT+VIP NVFGPHDNF+++ HV+P LI ++ A G
Sbjct: 156 AYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSG 202
Score = 41.9 bits (94), Expect = 0.003
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +1
Query: 715 WGSGKPLRQFIYSLXLGELFIW 780
WG+G P RQFIYSL L +LFIW
Sbjct: 208 WGTGNPRRQFIYSLDLAQLFIW 229
>BC093061-1|AAH93061.1| 321|Homo sapiens TSTA3 protein protein.
Length = 321
Score = 256 bits (628), Expect = 5e-68
Identities = 111/167 (66%), Positives = 133/167 (79%)
Frame = +2
Query: 194 ETWIFSGSKDGDLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSIND 373
E W+F SKD DL D QT ALF K +PTHVIHLAAMVGGLF N+ +NLDF+R+N+ +ND
Sbjct: 36 EDWVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMND 95
Query: 374 NILQACHKYNVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNR 553
N+L + + +KVVSCLSTCIFPDKTTYPIDETM+HNGPPH+SNFGYSYAKRMIDV NR
Sbjct: 96 NVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNR 155
Query: 554 GYNESYGCMFTSVIPCNVFGPHDNFSLKSSHVIPALIRRMDDAMQKG 694
Y + YGC FT+VIP NVFGPHDNF+++ HV+P LI ++ A G
Sbjct: 156 AYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSG 202
Score = 41.9 bits (94), Expect = 0.003
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +1
Query: 715 WGSGKPLRQFIYSLXLGELFIW 780
WG+G P RQFIYSL L +LFIW
Sbjct: 208 WGTGNPRRQFIYSLDLAQLFIW 229
>BC001941-1|AAH01941.1| 321|Homo sapiens tissue specific
transplantation antigen P35B protein.
Length = 321
Score = 256 bits (628), Expect = 5e-68
Identities = 111/167 (66%), Positives = 133/167 (79%)
Frame = +2
Query: 194 ETWIFSGSKDGDLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSIND 373
E W+F SKD DL D QT ALF K +PTHVIHLAAMVGGLF N+ +NLDF+R+N+ +ND
Sbjct: 36 EDWVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMND 95
Query: 374 NILQACHKYNVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNR 553
N+L + + +KVVSCLSTCIFPDKTTYPIDETM+HNGPPH+SNFGYSYAKRMIDV NR
Sbjct: 96 NVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNR 155
Query: 554 GYNESYGCMFTSVIPCNVFGPHDNFSLKSSHVIPALIRRMDDAMQKG 694
Y + YGC FT+VIP NVFGPHDNF+++ HV+P LI ++ A G
Sbjct: 156 AYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSG 202
Score = 41.9 bits (94), Expect = 0.003
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +1
Query: 715 WGSGKPLRQFIYSLXLGELFIW 780
WG+G P RQFIYSL L +LFIW
Sbjct: 208 WGTGNPRRQFIYSLDLAQLFIW 229
>BC019670-1|AAH19670.1| 383|Homo sapiens HSPC105 protein protein.
Length = 383
Score = 37.5 bits (83), Expect = 0.056
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 7/138 (5%)
Frame = +2
Query: 224 GDLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRE-NMSINDNILQACHKY 400
GD+R + E F T V H+A+ G+ N + +E N+ DNILQ C +
Sbjct: 56 GDIRHLSDVEKAFQDADVTCVFHIASY--GMSGREQLNRNLIKEVNVRGTDNILQVCQRR 113
Query: 401 NVKKVV-SCLSTCIFPDKTTYPIDETM----VHNGPPHSSNFGYSYAKRMIDVLNRGYNE 565
V ++V + IF + DE++ +H P H S +++++ +
Sbjct: 114 RVPRLVYTSTFNVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEQKVLEANATPLDR 173
Query: 566 SYGCMFTSVI-PCNVFGP 616
G + T + P ++GP
Sbjct: 174 GDGVLRTCALRPAGIYGP 191
>BC033675-1|AAH33675.1| 350|Homo sapiens TDP-glucose
4,6-dehydratase protein.
Length = 350
Score = 33.1 bits (72), Expect = 1.2
Identities = 30/132 (22%), Positives = 52/132 (39%)
Frame = +2
Query: 224 GDLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKYN 403
GD+ D + LF K V+H AA + + +F N+ ++ A H+
Sbjct: 75 GDICDSHFVKLLFETEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYGTHVLVSAAHEAR 133
Query: 404 VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYNESYGCMF 583
V+K + + ++ DE+ P +N Y+ +K + + Y E Y
Sbjct: 134 VEKFIYVSTDEVYGGSLDKEFDES----SPKQPTN-PYASSKAAAECFVQSYWEQYKFPV 188
Query: 584 TSVIPCNVFGPH 619
NV+GPH
Sbjct: 189 VITRSSNVYGPH 200
>BC005284-1|AAH05284.1| 316|Homo sapiens Unknown (protein for
IMAGE:3510977) protein.
Length = 316
Score = 33.1 bits (72), Expect = 1.2
Identities = 30/132 (22%), Positives = 52/132 (39%)
Frame = +2
Query: 224 GDLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKYN 403
GD+ D + LF K V+H AA + + +F N+ ++ A H+
Sbjct: 75 GDICDSHFVKLLFETEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYGTHVLVSAAHEAR 133
Query: 404 VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYNESYGCMF 583
V+K + + ++ DE+ P +N Y+ +K + + Y E Y
Sbjct: 134 VEKFIYVSTDEVYGGSLDKEFDES----SPKQPTN-PYASSKAAAECFVQSYWEQYKFPV 188
Query: 584 TSVIPCNVFGPH 619
NV+GPH
Sbjct: 189 VITRSSNVYGPH 200
>AY544125-1|AAT11156.1| 350|Homo sapiens growth-inhibiting protein
21 protein.
Length = 350
Score = 33.1 bits (72), Expect = 1.2
Identities = 30/132 (22%), Positives = 52/132 (39%)
Frame = +2
Query: 224 GDLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKYN 403
GD+ D + LF K V+H AA + + +F N+ ++ A H+
Sbjct: 75 GDICDSHFVKLLFETEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYGTHVLVSAAHEAR 133
Query: 404 VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYNESYGCMF 583
V+K + + ++ DE+ P +N Y+ +K + + Y E Y
Sbjct: 134 VEKFIYVSTDEVYGGSLDKEFDES----SPKQPTN-PYASSKAAAECFVQSYWEQYKFPV 188
Query: 584 TSVIPCNVFGPH 619
NV+GPH
Sbjct: 189 VITRSSNVYGPH 200
>AL359708-1|CAI12411.1| 350|Homo sapiens TDP-glucose
4,6-dehydratase protein.
Length = 350
Score = 33.1 bits (72), Expect = 1.2
Identities = 30/132 (22%), Positives = 52/132 (39%)
Frame = +2
Query: 224 GDLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKYN 403
GD+ D + LF K V+H AA + + +F N+ ++ A H+
Sbjct: 75 GDICDSHFVKLLFETEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYGTHVLVSAAHEAR 133
Query: 404 VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYNESYGCMF 583
V+K + + ++ DE+ P +N Y+ +K + + Y E Y
Sbjct: 134 VEKFIYVSTDEVYGGSLDKEFDES----SPKQPTN-PYASSKAAAECFVQSYWEQYKFPV 188
Query: 584 TSVIPCNVFGPH 619
NV+GPH
Sbjct: 189 VITRSSNVYGPH 200
>AL139318-1|CAI12084.1| 350|Homo sapiens TDP-glucose
4,6-dehydratase protein.
Length = 350
Score = 33.1 bits (72), Expect = 1.2
Identities = 30/132 (22%), Positives = 52/132 (39%)
Frame = +2
Query: 224 GDLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKYN 403
GD+ D + LF K V+H AA + + +F N+ ++ A H+
Sbjct: 75 GDICDSHFVKLLFETEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYGTHVLVSAAHEAR 133
Query: 404 VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYNESYGCMF 583
V+K + + ++ DE+ P +N Y+ +K + + Y E Y
Sbjct: 134 VEKFIYVSTDEVYGGSLDKEFDES----SPKQPTN-PYASSKAAAECFVQSYWEQYKFPV 188
Query: 584 TSVIPCNVFGPH 619
NV+GPH
Sbjct: 189 VITRSSNVYGPH 200
>AJ006068-1|CAA06840.1| 350|Homo sapiens dTDP-D-glucose
4,6-dehydratase protein.
Length = 350
Score = 33.1 bits (72), Expect = 1.2
Identities = 30/132 (22%), Positives = 52/132 (39%)
Frame = +2
Query: 224 GDLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKYN 403
GD+ D + LF K V+H AA + + +F N+ ++ A H+
Sbjct: 75 GDICDSHFVKLLFETEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYGTHVLVSAAHEAR 133
Query: 404 VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYNESYGCMF 583
V+K + + ++ DE+ P +N Y+ +K + + Y E Y
Sbjct: 134 VEKFIYVSTDEVYGGSLDKEFDES----SPKQPTN-PYASSKAAAECFVQSYWEQYKFPV 188
Query: 584 TSVIPCNVFGPH 619
NV+GPH
Sbjct: 189 VITRSSNVYGPH 200
>AF048686-1|AAD50061.1| 350|Homo sapiens dTDP-glucose
4,6-dehydratase like protein protein.
Length = 350
Score = 33.1 bits (72), Expect = 1.2
Identities = 30/132 (22%), Positives = 52/132 (39%)
Frame = +2
Query: 224 GDLRDKTQTEALFAKHKPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNILQACHKYN 403
GD+ D + LF K V+H AA + + +F N+ ++ A H+
Sbjct: 75 GDICDSHFVKLLFETEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYGTHVLVSAAHEAR 133
Query: 404 VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHSSNFGYSYAKRMIDVLNRGYNESYGCMF 583
V+K + + ++ DE+ P +N Y+ +K + + Y E Y
Sbjct: 134 VEKFIYVSTDEVYGGSLDKEFDES----SPKQPTN-PYASSKAAAECFVQSYWEQYKFPV 188
Query: 584 TSVIPCNVFGPH 619
NV+GPH
Sbjct: 189 VITRSSNVYGPH 200
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,488,513
Number of Sequences: 237096
Number of extensions: 2537459
Number of successful extensions: 4073
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4073
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -