Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0017
(800 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 107 4e-25
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 107 4e-25
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 107 4e-25
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 107 4e-25
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 32 0.024
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 31 0.041
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 27 0.51
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 27 0.51
U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase... 26 1.6
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 24 4.8
AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein hom... 24 4.8
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 24 4.8
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 107 bits (257), Expect = 4e-25
Identities = 46/117 (39%), Positives = 73/117 (62%)
Frame = +1
Query: 7 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDXEAXY 186
+LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +D EA Y
Sbjct: 45 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALY 104
Query: 187 DICRRNLDIERPTYTNLNRLIGQIVSSITXSLRXDGAXNVDLTEFQTNLVPYPRXHF 357
DIC R L + P+Y +LN L+ +S +T LR G N DL + N+VP+PR HF
Sbjct: 105 DICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHF 161
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 107 bits (257), Expect = 4e-25
Identities = 46/117 (39%), Positives = 73/117 (62%)
Frame = +1
Query: 7 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDXEAXY 186
+LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +D EA Y
Sbjct: 45 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALY 104
Query: 187 DICRRNLDIERPTYTNLNRLIGQIVSSITXSLRXDGAXNVDLTEFQTNLVPYPRXHF 357
DIC R L + P+Y +LN L+ +S +T LR G N DL + N+VP+PR HF
Sbjct: 105 DICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHF 161
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 107 bits (257), Expect = 4e-25
Identities = 46/117 (39%), Positives = 73/117 (62%)
Frame = +1
Query: 7 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDXEAXY 186
+LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +D EA Y
Sbjct: 45 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALY 104
Query: 187 DICRRNLDIERPTYTNLNRLIGQIVSSITXSLRXDGAXNVDLTEFQTNLVPYPRXHF 357
DIC R L + P+Y +LN L+ +S +T LR G N DL + N+VP+PR HF
Sbjct: 105 DICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHF 161
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 107 bits (257), Expect = 4e-25
Identities = 46/117 (39%), Positives = 73/117 (62%)
Frame = +1
Query: 7 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDXEAXY 186
+LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +D EA Y
Sbjct: 45 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALY 104
Query: 187 DICRRNLDIERPTYTNLNRLIGQIVSSITXSLRXDGAXNVDLTEFQTNLVPYPRXHF 357
DIC R L + P+Y +LN L+ +S +T LR G N DL + N+VP+PR HF
Sbjct: 105 DICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHF 161
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 31.9 bits (69), Expect = 0.024
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 7/100 (7%)
Frame = +3
Query: 363 WSRTRQSSLPXRPTMNSFPSPXSQTHASSPPTXW*NATPVMAST----WLAVCCTVVTSY 530
WS + T+ + P+ + THA + T W + P +T W+ T T
Sbjct: 174 WSDQPRPPTTTTTTVWTDPTATTTTHAPTTTTTWSDLPPPPPTTTTTVWIDPTATTTTHV 233
Query: 531 PXM*TRPS-XPSKPSVLSNSSTGVQPVSRSVS--TTSHPP 641
P T S P P + ++ P + + + TT++PP
Sbjct: 234 PPTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPP 273
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 31.1 bits (67), Expect = 0.041
Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 7/104 (6%)
Frame = +3
Query: 363 WSRTRQSSLPXRPTMNSFPSPXSQTHASSPPTXW*NATPVMAST----WLAVCCTVVTSY 530
WS T+ + P+ + THA + T W + P +T W+ T T
Sbjct: 174 WSDQPPPPTTTTTTVWTDPTATTTTHAPTTTTTWSDLPPPPPTTTTTVWIDPTATTTTHA 233
Query: 531 PXM*TRPS-XPSKPSVLSNSSTGVQPVSRSVS--TTSHPPWCPE 653
P T S P P + ++ P + + + TT++PP E
Sbjct: 234 PTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTSE 277
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 27.5 bits (58), Expect = 0.51
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 384 SLPXRPTMNSFPSPXSQTHASSPPTXW*NATPVMASTWLAVCCTVVTS 527
+L R + S PSP H+S PT T MA+ CT TS
Sbjct: 2 ALEDRCSPQSAPSPPHHHHSSQSPTS--TTTVTMATASPVPACTTTTS 47
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 27.5 bits (58), Expect = 0.51
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 384 SLPXRPTMNSFPSPXSQTHASSPPTXW*NATPVMASTWLAVCCTVVTS 527
+L R + S PSP H+S PT T MA+ CT TS
Sbjct: 2 ALEDRCSPQSAPSPPHHHHSSQSPTS--TTTVTMATASPVPACTTTTS 47
>U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase
protein.
Length = 260
Score = 25.8 bits (54), Expect = 1.6
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = -1
Query: 737 WSRRAPSFGXWRWCWTTCRRHVEPWPSRLRAPRW 636
W +P W+T +RHV+ P+R W
Sbjct: 188 WPALSPDLNPIENLWSTLKRHVKNQPARSADDLW 221
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 24.2 bits (50), Expect = 4.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 691 QHADXTLNLGQVASGH 644
+H D T +L QV SGH
Sbjct: 971 KHGDMTFHLAQVLSGH 986
>AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein
homolog protein.
Length = 394
Score = 24.2 bits (50), Expect = 4.8
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -2
Query: 748 GRTCGQGEPQVSAXGGGVGQHADXTLNLGQVASGHH 641
G + G G GGG G L+LGQ + HH
Sbjct: 88 GPSPGAGGTGSGGSGGGSGGIGSGALHLGQNPNLHH 123
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 24.2 bits (50), Expect = 4.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 691 QHADXTLNLGQVASGH 644
+H D T +L QV SGH
Sbjct: 983 KHGDVTFHLSQVLSGH 998
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,474
Number of Sequences: 2352
Number of extensions: 15894
Number of successful extensions: 41
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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