Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0014
(750 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 31 0.007
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 31 0.007
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 29 0.052
AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein. 25 0.85
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 22 4.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 8.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 8.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 8.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 8.0
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 31.5 bits (68), Expect = 0.007
Identities = 35/120 (29%), Positives = 47/120 (39%), Gaps = 17/120 (14%)
Frame = +2
Query: 80 HPGLPKGEPNFAPYNYPPYRAYEKI-------KDPHLPAPP-----PLVSEKNTVIVK-- 217
H G P +P A PPY+ K + P P P P++S + + +
Sbjct: 129 HNGDPLSQPPPAHMGIPPYQLDSKTAGSMGLTRPPMYPFPAGQYPYPILSPEMSQVAASW 188
Query: 218 HDAKQIHLEQNHQYPSK-PRNDP-SPHYLPSRTYRTGPSPHAPPHQTLQP-APHTAALPA 388
H L + S P P S LPS YR P+ PPH L P PH ++ PA
Sbjct: 189 HTPSMYPLSPGAGFRSPYPSALPISTSSLPSDFYRFSPTGLIPPHPGLSPHPPHLSSHPA 248
Score = 25.4 bits (53), Expect = 0.49
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +2
Query: 167 LPAPPPLVSEKNTVIVKHDAKQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSPH 334
LP+P V+ + + Q L + + K P PH+ P R G +PH
Sbjct: 701 LPSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPPPPHPHHQPPRN-PVGTNPH 755
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 31.5 bits (68), Expect = 0.007
Identities = 35/120 (29%), Positives = 47/120 (39%), Gaps = 17/120 (14%)
Frame = +2
Query: 80 HPGLPKGEPNFAPYNYPPYRAYEKI-------KDPHLPAPP-----PLVSEKNTVIVK-- 217
H G P +P A PPY+ K + P P P P++S + + +
Sbjct: 21 HNGDPLSQPPPAHMGIPPYQLDSKTAGSMGLTRPPMYPFPAGQYPYPILSPEMSQVAASW 80
Query: 218 HDAKQIHLEQNHQYPSK-PRNDP-SPHYLPSRTYRTGPSPHAPPHQTLQP-APHTAALPA 388
H L + S P P S LPS YR P+ PPH L P PH ++ PA
Sbjct: 81 HTPSMYPLSPGAGFRSPYPSALPISTSSLPSDFYRFSPTGLIPPHPGLSPHPPHLSSHPA 140
Score = 25.4 bits (53), Expect = 0.49
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +2
Query: 167 LPAPPPLVSEKNTVIVKHDAKQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSPH 334
LP+P V+ + + Q L + + K P PH+ P R G +PH
Sbjct: 593 LPSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPPPPHPHHQPPRN-PVGTNPH 647
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 28.7 bits (61), Expect = 0.052
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2
Query: 188 VSEKNTVIVKHDA--KQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQP 361
+++ N + H A + + L + PS R+ P S + T P+P PP + L P
Sbjct: 52 LAQNNQLFTHHKAPIRPVALPPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTP 111
Query: 362 A 364
+
Sbjct: 112 S 112
>AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein.
Length = 257
Score = 24.6 bits (51), Expect = 0.85
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 299 PSRTYRTGPSPHAPPHQTLQPAPHTA 376
PS T +P PPH T Q P+ A
Sbjct: 135 PSTTDDLSTNPTPPPHYTYQIIPYEA 160
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +3
Query: 435 SCNGHRPTTQLLLQ*NRRFXVLHLHIFTENLV 530
SC+ H ++L+ Q N + ++ L +FT + +
Sbjct: 215 SCDLHHRLSKLIKQLNATYGLILLLMFTSHFI 246
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 86 GLPKGEPNFAPYNYPPYRAYE 148
GL G+P F PPY +E
Sbjct: 428 GLRNGDPCFFHDTIPPYLFFE 448
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 86 GLPKGEPNFAPYNYPPYRAYE 148
GL G+P F PPY +E
Sbjct: 428 GLRNGDPCFFHDTIPPYLFFE 448
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 86 GLPKGEPNFAPYNYPPYRAYE 148
GL G+P F PPY +E
Sbjct: 428 GLRNGDPCFFHDTIPPYLFFE 448
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 86 GLPKGEPNFAPYNYPPYRAYE 148
GL G+P F PPY +E
Sbjct: 428 GLRNGDPCFFHDTIPPYLFFE 448
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,294
Number of Sequences: 336
Number of extensions: 3410
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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