Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0014
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.4  
DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.        25   1.9  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       25   3.3  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    25   3.3  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   4.4  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   4.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   4.4  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    24   5.8  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +2

Query: 290  HYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDK 397
            H  P     TGP P  P H+  QP    AA P Q +
Sbjct: 907  HRGPGAAAATGPPP--PTHRLEQPPQVVAAAPTQQQ 940


>DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.
          Length = 447

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = +2

Query: 2   PFHPQXDYCSPHARLVSSKAQDKNSSHPGLPKGEPNF 112
           P H     CSP     + KA D   S   L KGE  F
Sbjct: 22  PHHGTNGQCSPGDEKKAEKATDLEQSRSRLYKGESIF 58


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 74  SSHPGLPKGEPNFAPYNYPPYRAYEKIKD 160
           ++HP    G P F  Y    ++AY+  +D
Sbjct: 396 ANHPNATCGRPEFGDYCITDFQAYDTDED 424


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
 Frame = +2

Query: 188 VSEKNTVI------VKHDAKQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGP 325
           VS +N +I      + H   ++ L  N+   S  + DP+   LPS+  ++ P
Sbjct: 240 VSRRNRIIPSLEHWIPHCGARLILNSNYTRKSSSKKDPTSGVLPSQLLKSVP 291


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = +2

Query: 320 GPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQPQPKPQ 436
           GP P  PPH      PH   LP      +   Q QP PQ
Sbjct: 85  GPMPAQPPHH--HQHPHHHQLP-HHPHHQHHPQQQPSPQ 120



 Score = 23.4 bits (48), Expect = 7.6
 Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
 Frame = +2

Query: 233 IHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPS-PHAPPHQTLQPAPHTA 376
           +H++Q       P     PH+     +   P  PH   H   QP+P T+
Sbjct: 74  LHIKQEPLGSDGPMPAQPPHHHQHPHHHQLPHHPHHQHHPQQQPSPQTS 122


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = +2

Query: 320 GPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQPQPKPQ 436
           GP P  PPH      PH   LP      +   Q QP PQ
Sbjct: 85  GPMPAQPPHH--HQHPHHHQLP-HHPHHQHHPQQQPSPQ 120



 Score = 23.4 bits (48), Expect = 7.6
 Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
 Frame = +2

Query: 233 IHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPS-PHAPPHQTLQPAPHTA 376
           +H++Q       P     PH+     +   P  PH   H   QP+P T+
Sbjct: 74  LHIKQEPLGSDGPMPAQPPHHHQHPHHHQLPHHPHHQHHPQQQPSPQTS 122


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 17/65 (26%), Positives = 20/65 (30%), Gaps = 3/65 (4%)
 Frame = +2

Query: 260 PSKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSGRR--LY-QPQPK 430
           P  P   P P   P  +  +G  P         P P     P     G R   Y +P   
Sbjct: 268 PPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAPGGPPQGMRPNFYNRPMGD 327

Query: 431 PQLQR 445
           PQ  R
Sbjct: 328 PQTSR 332


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
 Frame = +2

Query: 260 PSKPRNDPSPHY---LPSRTYRTGPSPHAP 340
           PS P ++PSP Y   + SR  +  PS   P
Sbjct: 436 PSYPHSEPSPDYAMLIGSRVIQRTPSSSPP 465


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,005
Number of Sequences: 2352
Number of extensions: 14647
Number of successful extensions: 39
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)