Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0011
(750 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 31 0.23
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 30 0.40
SPAC17A2.06c |vps8||WD repeat protein Vps8|Schizosaccharomyces p... 28 1.2
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 1.2
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 28 1.6
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 27 2.2
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 27 2.2
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 27 2.2
SPAC1399.03 |fur4||uracil permease|Schizosaccharomyces pombe|chr... 27 2.9
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 3.8
SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual 26 5.0
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 26 5.0
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 5.0
SPAC589.06c |||pho88 family protein|Schizosaccharomyces pombe|ch... 26 5.0
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 26 5.0
SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm type|Schizos... 26 5.0
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 26 5.0
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 26 6.6
SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|c... 25 8.7
SPAC17H9.05 |ebp2||rRNA processing protein Ebp2|Schizosaccharomy... 25 8.7
SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase ... 25 8.7
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 8.7
SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces pom... 25 8.7
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 25 8.7
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 30.7 bits (66), Expect = 0.23
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Frame = +2
Query: 5 PLXTESEIVKTDAPTITEVHQKESDKKP----DDTQPSKISFSTQD--SINSDIYS---S 157
PL +S+ V T P++ + + P + T PS+++ T+D S+++ +S +
Sbjct: 347 PLMQKSKSVPTSIPSVVPANISSPNPNPTLAPNPTGPSRVTSGTEDLLSLDATPFSPTLA 406
Query: 158 NESTVTNGLPTAPSVTTTKAPIIEEEDTSLFDHNPAFPPIP 280
+ T +N + T AP L +H P FP P
Sbjct: 407 PQHTSSNATKHSAPPVTKSAPFPVVSPLQL-NHTPGFPTSP 446
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 29.9 bits (64), Expect = 0.40
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 140 SDIYSSNESTVTNGLPT-APSVTTTKAPIIEEEDTSLFDHNPAFPPIPDDLAVLSNHGDE 316
S + S N ST T+G + + + A +D+SL + N PP+P ++ E
Sbjct: 206 SRLNSFNSSTSTSGSSSNVAAEVSNDASQPSNQDSSL-NSNIVKPPLPPSNVQSNSSSSE 264
Query: 317 IVPEPSAE 340
VP+P+AE
Sbjct: 265 NVPKPNAE 272
>SPAC17A2.06c |vps8||WD repeat protein Vps8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1272
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +2
Query: 80 KKPDDTQPSKISFSTQDSINSDIYSSNESTVTNGLPTAPSVTTTKAPIIEEE 235
K DDT+ + ++DS+NS + + ++ T G+ TA + + P ++E
Sbjct: 13 KNGDDTRTLRALSFSKDSVNSSSFDNEAASTTLGISTA--IHASNRPFRQDE 62
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 28.3 bits (60), Expect = 1.2
Identities = 37/203 (18%), Positives = 65/203 (32%), Gaps = 3/203 (1%)
Frame = +2
Query: 5 PLXTESEIVKTDAPT--ITEVHQKESDKKPDDTQPSKISFSTQDSINSDIYSSNESTVTN 178
PL + + T A + +T V+ + S S S + ++ + S+N +T T+
Sbjct: 342 PLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTS 401
Query: 179 GLPTAPSVTTTKA-PIIEEEDTSLFDHNPAFPPIPDDLAVLSNHGDEIVPEPSAEGDHMT 355
TAPS T+ P T L N + S + S +
Sbjct: 402 VSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLSSVNSTTATSASSTPLSSVN 461
Query: 356 VHDTVXXXXXXXXXXXXXXXXXXXXDIILTTEKPSVTSIETSTTAKQESTTVVEQLKESP 535
+ + S TS ++ STT +P
Sbjct: 462 STTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAP 521
Query: 536 MLNLRSAIPTEILNAPSLVPADT 604
N S +PT +++ L A++
Sbjct: 522 SYNTSSVLPTSSVSSTPLSSANS 544
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 27.9 bits (59), Expect = 1.6
Identities = 24/90 (26%), Positives = 37/90 (41%)
Frame = +2
Query: 38 DAPTITEVHQKESDKKPDDTQPSKISFSTQDSINSDIYSSNESTVTNGLPTAPSVTTTKA 217
D+PT + + S K + S S + DS+N+ S +T+ PT S T++
Sbjct: 51 DSPTSSHIDPSVSAKLDSQRKLSLKSGNMWDSLNAP------SELTSKNPTVSSTTSSAN 104
Query: 218 PIIEEEDTSLFDHNPAFPPIPDDLAVLSNH 307
P I S F NP P +S +
Sbjct: 105 PAIVSNGGSPFYKNPVVANNPSSTFDMSTN 134
>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 413
Score = 27.5 bits (58), Expect = 2.2
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +2
Query: 86 PDDTQPSKISFSTQDSINSDIYSSNESTVTNGLPTAPSVTTTKAPIIEEEDTSLFDHNPA 265
P T S S+ DS+++ SSN S T + + S + T P + L N A
Sbjct: 155 PSTTDSSSTDVSSSDSVSTSASSSNASN-TVSVTSPASSSATPLPNQPSQQQFLVSKNDA 213
Query: 266 F 268
F
Sbjct: 214 F 214
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 27.5 bits (58), Expect = 2.2
Identities = 30/138 (21%), Positives = 48/138 (34%), Gaps = 3/138 (2%)
Frame = +2
Query: 188 TAPSVTTTKAPIIEEEDTSLFDHNPAFPPIPDDLAVLSNHGDEIVPEPSAEGDHMTVHDT 367
T P V TT P +E T + + P +A ++ +E P E + +T
Sbjct: 167 TTPMVETTTIPTVETMTTPMVEAMTILP-----MAAMTTPMEETTTTPMEETTTTPMVET 221
Query: 368 VXXXXXXXXXXXXXXXXXXXXDIILTT---EKPSVTSIETSTTAKQESTTVVEQLKESPM 538
+ I TT E ++ET+T TT VE+ +PM
Sbjct: 222 MITPMVEAMTTPTEVVGRSMVSTIRTTTPMEAMITPTVETTTLPTAAMTTPVEETTTTPM 281
Query: 539 LNLRSAIPTEILNAPSLV 592
+ PT + +V
Sbjct: 282 VE-TMITPTVVTTTTPMV 298
Score = 26.6 bits (56), Expect = 3.8
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +2
Query: 449 EKPSVTSIETSTTAKQESTTV---VEQLKESPMLNLRSAIPTEILNAP 583
E ++ ++ET+TT E+TT+ VE +PM+ + E + P
Sbjct: 97 ETTTIPTVETTTTPMVETTTITPMVETTTITPMVEAMITLMEETMTTP 144
Score = 25.8 bits (54), Expect = 6.6
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +2
Query: 440 LTTEKPSVTSIETSTTAKQESTTVVEQLKE----SPMLNLRSAIPTEILNAP 583
+TT + I T TT +E TT+ ++E +PM+ + +P + P
Sbjct: 43 ITTMTIPMEEITTMTTPMEEITTITTPMEETTTITPMVETTTILPMAAMTTP 94
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/55 (23%), Positives = 30/55 (54%)
Frame = +2
Query: 440 LTTEKPSVTSIETSTTAKQESTTVVEQLKESPMLNLRSAIPTEILNAPSLVPADT 604
+TT + I T TT +E+TT+ ++ + +L + +A+ T ++ ++ +T
Sbjct: 53 ITTMTTPMEEITTITTPMEETTTITPMVETTTILPM-AAMTTPMVETTTIPTVET 106
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = -1
Query: 366 VSCTVMWSPSADGSGTISSPWLLKTAKSSGIGGNAGLXXXXXXXXXSMIGALVVVTDGAV 187
+S +W P G G I W L+ SSG+G N + L+ + DG
Sbjct: 2202 LSLNNVWFPVIFGLGLICPRWCLEFWSSSGLGINLPWAGKASALLTKSVWLLLALWDGIQ 2261
Query: 186 G 184
G
Sbjct: 2262 G 2262
>SPAC1399.03 |fur4||uracil permease|Schizosaccharomyces pombe|chr
1|||Manual
Length = 581
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 50 ITEVHQKESDKKPDDTQPSKISFSTQDSINSDIYSSNESTVTNGLPTAPSV 202
+TE +K + P++ ++ +++DSI+ D S +GLPT V
Sbjct: 516 VTECGEKMLSEVPEEADDYLLTLASEDSIDKD---STSEIYIDGLPTEKEV 563
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.6 bits (56), Expect = 3.8
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +2
Query: 449 EKPSVTSIETSTTAKQESTTVVEQLKESPMLNLRSAIPTEILNAPSLVPADTGEPLDDGI 628
E+ S I+TS E+ + +E+ K P+ PT +P T LDD
Sbjct: 538 EERSFEQIKTSIHIAPENISAIEESKSVPL-------PTSFATT---IPGSTSAALDDQQ 587
Query: 629 TTDVP 643
TT+ P
Sbjct: 588 TTEAP 592
>SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +2
Query: 137 NSDIYSSNESTVTNGLPTAPSVTTTKAPIIEEEDTSLFDHNPAFPPIP 280
N + YS ++ ++ + P+ S + ++++ S+ HN PPIP
Sbjct: 105 NDNNYSISDLSIKSPPPSLTSDWIVDSYASDQDNPSVHTHNRTTPPIP 152
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 26.2 bits (55), Expect = 5.0
Identities = 17/77 (22%), Positives = 37/77 (48%)
Frame = +2
Query: 14 TESEIVKTDAPTITEVHQKESDKKPDDTQPSKISFSTQDSINSDIYSSNESTVTNGLPTA 193
+ESE D+ + + E D D + S+ S++DS ++ S ++S+ ++ +
Sbjct: 261 SESESSSKDSDSSSNSSDSEDDSSSDSSD-SESESSSEDSDSTSSSSDSDSSSSSEDGNS 319
Query: 194 PSVTTTKAPIIEEEDTS 244
+ TTT + + T+
Sbjct: 320 NTDTTTSGEVSAQSSTN 336
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 5.0
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = +2
Query: 14 TESEIVKTDAPTITEVHQKESDKKPDDTQPSKISFSTQDSINSDIYSSNESTVTNGLPTA 193
+ESE +++ EV +K +KK ++ S S S+ DS +S+ S+ S+ + ++
Sbjct: 175 SESESSSSESEEEEEVVEKTEEKKEGSSESSSDSESSSDS-SSESGDSDSSSDSESESSS 233
Query: 194 PSVTTTKAPIIEEE 235
KA EE
Sbjct: 234 EDEKKRKAEPASEE 247
>SPAC589.06c |||pho88 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 202
Score = 26.2 bits (55), Expect = 5.0
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 32 KTDAPTITEVHQKESDK 82
K+D PTITE+++ E++K
Sbjct: 184 KSDGPTITELNENETEK 200
>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1279
Score = 26.2 bits (55), Expect = 5.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 642 GTSVVMPSSNGSPVSAGTRDGALSISVGI 556
G SV++P NG R AL+IS GI
Sbjct: 435 GCSVILPPINGDSDVVSVRGPALNISEGI 463
>SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 26.2 bits (55), Expect = 5.0
Identities = 7/30 (23%), Positives = 17/30 (56%)
Frame = +2
Query: 275 IPDDLAVLSNHGDEIVPEPSAEGDHMTVHD 364
+PD + + N + +P P+ +G H++ +
Sbjct: 444 VPDQMHIPENGNSDTMPVPNTQGKHLSAEE 473
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 26.2 bits (55), Expect = 5.0
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +2
Query: 74 SDKKPDDTQPSKISFSTQDSINSDIYSSNESTVTNGLPTAPSVTTTKAPIIEEEDTSLFD 253
S +KP K+S S ++ + +++++ GL ++P T AP E SL
Sbjct: 302 SPRKPPKPPLRKVSTQRSSSPIENLATKSDASLVTGLQSSP--YTHIAPASE---MSLIP 356
Query: 254 HNPAFPPIP 280
P PP P
Sbjct: 357 EKPRLPPRP 365
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 25.8 bits (54), Expect = 6.6
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 77 DKKPDDTQPSKISFSTQDSINSDIYSSNES 166
D+ P++++P K +T + N D+Y+ E+
Sbjct: 247 DESPEESEPEKELKATFNQQNQDLYNQTEA 276
>SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|chr
2|||Manual
Length = 279
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 371 ERCRAQSCGRPLQMARVRFHLRGCSRL 291
E + +CG P R R H R C +L
Sbjct: 29 ESAQCNNCGGPFTWFRRRHHCRWCGKL 55
>SPAC17H9.05 |ebp2||rRNA processing protein Ebp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 333
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 152 SSNESTVTNGLPTAPSVTTTKAPIIEEEDTS 244
S+ ST L + T K+PIIE DT+
Sbjct: 28 SNESSTSVEALNEKEMINTIKSPIIETADTA 58
>SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase
Its3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 742
Score = 25.4 bits (53), Expect = 8.7
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +2
Query: 182 LPTAPSVTTTKAPIIEEEDTSLFDHNPAFPPIPDDLAVLSNHGDEIV 322
L T P + I E + SLF N FP P + S+ D ++
Sbjct: 61 LHTNPKIEVRSETHIYEPNDSLFKENQDFPSNPTAHSPSSSSNDSVI 107
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.4 bits (53), Expect = 8.7
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 101 PSKISFSTQDSINSDIYSS-NESTVTNGLPTAPSVTTTKAPIIEEEDTSLFDHNPAFPPI 277
PS+IS T+DSI+ D + + ST LP P + K + D PA P I
Sbjct: 708 PSRISEVTEDSIDEDKQNEVDPSTSARALP-PPGLRFGKVDTLASLAHDDLDDLPAVPRI 766
>SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1325
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +2
Query: 452 KPSVTSIETSTTAKQESTTVVEQLKESPMLNLRSAIPTEILNAPSLVP 595
K SV ++ + T+ + +SP+ N + PT N PS P
Sbjct: 812 KASVANMSALNKSTNNETSDSKPSLKSPLFNFSADAPTFTFNKPSETP 859
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 80 KKPDDTQPSKISFSTQDSINSDIYSSNESTVTNGLPTAPSVTTTKA 217
K P+ P+K+SF + +I+ + + + S LP +P+ +TK+
Sbjct: 196 KDPNSLSPTKLSFLSTSNIDPEDLTEDNSI----LPVSPTRDSTKS 237
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,563,554
Number of Sequences: 5004
Number of extensions: 48601
Number of successful extensions: 238
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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