Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0006
         (385 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    25   1.3  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   2.9  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   5.1  
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    22   8.9  

>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 120 NQRNMAEKCIVSKTGDRVRPHP 185
           N+R + E+C+    GD +R  P
Sbjct: 512 NRRELFEQCVAPSVGDELRTGP 533


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -2

Query: 162  LSYSLYIFQPCFFGFICVSIVACQPCF 82
            LS+S Y+    FF FI  S    Q CF
Sbjct: 1430 LSFSPYVSSSAFFEFIPFSGKQFQMCF 1456


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 186  RDEDEPGLLSYSLYIFQP 133
            +DE EP    YS +I +P
Sbjct: 1610 QDESEPNTSQYSTFIHEP 1627


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 7/23 (30%), Positives = 10/23 (43%)
 Frame = +2

Query: 32  PILRPTEHTIDTQIKPKKHGWQA 100
           PI  PTE  +   +  K   W +
Sbjct: 270 PIYEPTERVVGNNVDDKVKAWHS 292


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,921
Number of Sequences: 2352
Number of extensions: 6761
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)