Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0002
(754 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 489 e-138
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 483 e-137
SB_56| Best HMM Match : Actin (HMM E-Value=0) 482 e-136
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 478 e-135
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 380 e-106
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 253 1e-67
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 229 2e-60
SB_54| Best HMM Match : Actin (HMM E-Value=0) 225 3e-59
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 205 3e-53
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 172 2e-43
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 106 2e-23
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 81 7e-16
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 71 8e-13
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 58 6e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.082
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.11
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 33 0.33
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 32 0.57
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.76
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.76
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.76
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 1.0
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 1.0
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 1.3
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 31 1.3
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 31 1.3
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 1.3
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 1.8
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 1.8
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.8
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.8
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 1.8
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.8
SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94) 30 2.3
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 30 2.3
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 30 2.3
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 2.3
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 29 3.1
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 29 4.1
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 4.1
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 4.1
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 29 5.4
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 5.4
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 29 5.4
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 29 5.4
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 5.4
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 28 7.1
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 28 7.1
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 7.1
SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21) 28 7.1
SB_36012| Best HMM Match : DUF755 (HMM E-Value=0.064) 28 7.1
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 28 7.1
SB_41475| Best HMM Match : HSA (HMM E-Value=7.5) 28 9.4
SB_30534| Best HMM Match : EGF (HMM E-Value=0.12) 28 9.4
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 28 9.4
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 28 9.4
SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12) 28 9.4
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 9.4
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 28 9.4
SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4) 28 9.4
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 489 bits (1205), Expect = e-138
Identities = 229/235 (97%), Positives = 234/235 (99%)
Frame = +2
Query: 47 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 226
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 227 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 406
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 407 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 586
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 587 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 751
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASSS 235
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 483 bits (1191), Expect = e-137
Identities = 227/235 (96%), Positives = 233/235 (99%)
Frame = +2
Query: 47 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 226
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 227 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 406
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 407 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 586
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180
Query: 587 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 751
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMETAASSS 235
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 482 bits (1189), Expect = e-136
Identities = 227/233 (97%), Positives = 232/233 (99%)
Frame = +2
Query: 53 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 232
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 233 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 412
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 413 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 592
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 593 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 751
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSS
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSS 234
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 478 bits (1179), Expect = e-135
Identities = 225/233 (96%), Positives = 232/233 (99%)
Frame = +2
Query: 53 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 232
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 233 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 412
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 413 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 592
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 593 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 751
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVALDFEQEMATAA+SS
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATAAASS 234
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 380 bits (936), Expect = e-106
Identities = 191/235 (81%), Positives = 199/235 (84%)
Frame = +2
Query: 47 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 226
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 227 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 406
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 407 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 586
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DS G + H +
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS------------GDGVSHTV---- 164
Query: 587 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 751
I ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSS
Sbjct: 165 -----------PIYEERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSS 208
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 253 bits (619), Expect = 1e-67
Identities = 118/232 (50%), Positives = 161/232 (69%), Gaps = 3/232 (1%)
Frame = +2
Query: 65 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 238
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 239 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 415
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 416 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 595
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AG
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAG 186
Query: 596 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 751
RD+T YL+K++ RGY+F TA+ E VR +KEKLCYV + EQE A ++
Sbjct: 187 RDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYVGYNIEQEQKLALETT 238
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 229 bits (560), Expect = 2e-60
Identities = 110/120 (91%), Positives = 116/120 (96%)
Frame = +2
Query: 392 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 571
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 572 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 751
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSS
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSS 197
Score = 183 bits (445), Expect = 2e-46
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +2
Query: 53 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 232
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 233 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 319
RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 225 bits (550), Expect = 3e-59
Identities = 100/150 (66%), Positives = 126/150 (84%)
Frame = +2
Query: 299 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 478
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 479 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 658
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 659 AEREIVRDIKEKLCYVALDFEQEMATAASS 748
AE++I+RD+KE LCY A+D+E+E+ A +S
Sbjct: 2249 AEQQIIRDLKETLCYCAMDYERELKEAETS 2278
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 71 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 172
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 205 bits (500), Expect = 3e-53
Identities = 96/106 (90%), Positives = 102/106 (96%)
Frame = +2
Query: 413 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 592
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 593 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 730
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 172 bits (419), Expect = 2e-43
Identities = 74/116 (63%), Positives = 101/116 (87%)
Frame = +2
Query: 347 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 526
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 527 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 694
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 106 bits (254), Expect = 2e-23
Identities = 47/126 (37%), Positives = 80/126 (63%)
Frame = +2
Query: 257 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 436
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 437 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 616
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 617 MKILTE 634
++ E
Sbjct: 123 RQMFEE 128
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 81.4 bits (192), Expect = 7e-16
Identities = 40/92 (43%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = +2
Query: 458 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 634
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 635 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 730
RG++FT+++ +IV DIKEK+CY++ D +E+
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKDHLKEV 858
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +2
Query: 41 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 211
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 212 GDEAQSKRGILTL 250
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 71.3 bits (167), Expect = 8e-13
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Frame = +2
Query: 425 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 601
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AGRD
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 602 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 733
+T ++ ++L ER E + IKE+ Y+ D +E A
Sbjct: 98 ITFFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFA 141
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 56 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 172
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 58.4 bits (135), Expect = 6e-09
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 8/182 (4%)
Frame = +2
Query: 59 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 238
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 239 ILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 412
L Y P + G + NWD ++IW +TF E + M +
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDE 323
Query: 413 IMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 574
I+FE +N A+ A LS Y S +V+D+G +H VP++ G + A+
Sbjct: 324 ILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAV 383
Query: 575 LR 580
R
Sbjct: 384 RR 385
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +2
Query: 185 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 364
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.43
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 494 TGIVLDSGDGVSHTVPI 544
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 169 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 53
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 302 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 481
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 482 SGRTTGIV 505
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 35.1 bits (77), Expect = 0.062
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +3
Query: 438 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 575
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 417 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW--TPATVSPTPCPSTKDTHSPTPSC 578
CS+HS +P C PSK C + V+PP + T ++ P C ++ P C
Sbjct: 1521 CSEHSCKPEC--PSKCCMK----VLPPTTLGQNTANSLCPVYCLTSCKPDCPIKCC 1570
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 438 PPCTSPSKPCSRCTRPVVPPVSC 506
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 34.7 bits (76), Expect = 0.082
Identities = 29/77 (37%), Positives = 34/77 (44%)
Frame = +1
Query: 448 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDP 627
RR S A R RS R R+ RRR RR R+P H S SRSR R P
Sbjct: 211 RRSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSR-SRSPRRRH 269
Query: 628 HRARLLVHYHRRAGNRS 678
R+R H R+ + S
Sbjct: 270 SRSRSPTHRRHRSRSHS 286
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 438 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTKDTHSPTPS 575
P TSP + P +R P+ PP C + V PTP S+K + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 426 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 539
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 441 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 539
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 33.5 bits (73), Expect = 0.19
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 426 HSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 575
HST ++PS P + CT P P P + TP+T S PST T S TPS
Sbjct: 63 HSTPSAPSTPSTPSTPCT-PSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +3
Query: 423 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSP--TPS 575
K+ R ++PS PC+ T P P P + TP+T S TPC PST T S TPS
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPS 55
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +3
Query: 447 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSPTP 572
++PS PC+ T P P P + TP+T S TPC PST T S TP
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TP 416
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 420 SKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 575
S ST +PS P + CT P P P + TP+T S TPC + + TPS
Sbjct: 22 STPSTPSTPRTPSTPSTPCT-PSTPSTPSTPITPSTPS-TPCTHSTPSAPSTPS 73
Score = 27.9 bits (59), Expect = 9.4
Identities = 28/91 (30%), Positives = 34/91 (37%), Gaps = 4/91 (4%)
Frame = +3
Query: 315 PSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVVP 494
PST S S P ++ S + + PCT S P + T P P
Sbjct: 18 PSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTH-STPSAPST-PSTP 75
Query: 495 PVSCW--TPATVSPTPCPSTKDTHS--PTPS 575
C TP+T S PST T S TPS
Sbjct: 76 STPCTPSTPSTPSTPSTPSTPSTPSAPSTPS 106
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Frame = +3
Query: 441 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTKDTHSP 566
P T PC + CT+ +P +TP T TPC PST+ +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +3
Query: 417 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 539
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +3
Query: 441 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 539
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +3
Query: 438 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 575
P SP+ P P P + TP T +PT TK T + TP+
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 432 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 575
T P T+P++ T P + TP +PTP T T +PT S
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 438 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTKDTHSPTPS 575
P +P+KP P + TP T SPT P +T +PTP+
Sbjct: 31 PTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPT 77
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +3
Query: 429 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 569
+T P T K + T + P TP PTP T T +PT
Sbjct: 72 ATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = +3
Query: 432 TRP-PCTSPS--KPCSRCTRPVVPPVSCWTPATVSP-TPCPS--TKDTHSPT 569
T+P P T+P+ KP P P + TP +P TP P+ T H+PT
Sbjct: 92 TKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPT 143
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +3
Query: 432 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP-TPS 575
T+P T+P+ T P S P +PTP T T +P TP+
Sbjct: 37 TKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPT 85
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +3
Query: 429 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPCPSTKDTHSPTPS 575
ST P T+P+ T P + TP +P TP P+T PTP+
Sbjct: 46 STAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPA 97
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 438 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 533
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/88 (23%), Positives = 30/88 (34%)
Frame = +3
Query: 312 IPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 491
+PS M C PP S + T T+P+ P + T P
Sbjct: 86 LPSWMPCNCPPDEDDSKGGAAGAEEKEEGEGGGDTPTTAPTTA-ATTPTTPTTAPTTPTT 144
Query: 492 PPVSCWTPATVSPTPCPSTKDTHSPTPS 575
P + TP T + TP +P P+
Sbjct: 145 PTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 31.9 bits (69), Expect = 0.57
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 435 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHS 563
+PP T+PSK T P+ P++ TP T T +TK T S
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.76
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 248 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 400
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.76
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 144 GNTARGASSPAKPALHIPEPLSTT 73
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.76
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 389 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 505
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.76
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 292 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 116
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251
Query: 115 CETGLAHT 92
CET L T
Sbjct: 252 CETQLVPT 259
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 31.5 bits (68), Expect = 0.76
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -2
Query: 594 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNM 415
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 414 IWVIFSLLALGLR 376
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -2
Query: 594 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 457
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -2
Query: 594 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 457
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.76
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 144 GNTARGASSPAKPALHIPEPLSTT 73
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 292 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 116
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309
Query: 115 CETGLAHT 92
CET L T
Sbjct: 310 CETQLVLT 317
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 292 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 116
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129
Query: 115 CETGLAHT 92
CET L T
Sbjct: 130 CETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 292 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 116
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163
Query: 115 CETGLAHT 92
CET L T
Sbjct: 164 CETQLVLT 171
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 292 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 116
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446
Query: 115 CETGLAHT 92
CET L T
Sbjct: 447 CETQLVLT 454
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 292 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 116
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287
Query: 115 CETGLAHT 92
CET L T
Sbjct: 288 CETQLVLT 295
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 426 HSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTP 572
H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 30.7 bits (66), Expect = 1.3
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -2
Query: 534 VWE--TPSPESSTIPVVRPD-------AYSESTAWMATYMAGVLNVSNMIWVIFSLLALG 382
VWE T P + T+P + D Y S +W+ VL N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 381 LRGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS 217
L A + T C T +L + ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 447 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTK 551
+SP KP T+PVVP P+ + P P PS+K
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 292 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 116
V+PV S D + S +C ++LSH + H M D +HG RS S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211
Query: 115 CETGLAHT 92
CET L T
Sbjct: 212 CETQLVLT 219
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 319 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 152
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 210 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 268
Query: 151 DRGEHGARSIISCETGLAHT 92
+HG R +SCET L T
Sbjct: 269 SIFQHGFRQALSCETQLVLT 288
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 144 GNTARGASSPAKPALHIPEPLSTT 73
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 373 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 465
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 426 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 575
H RPP S P +R T P P + PAT +PT +T + TP+
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 429 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 575
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 137 TTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +3
Query: 429 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPT-PCPSTKD-THSPTPSCVWT*P 593
+T P T+P+KP + T P + PAT +PT P +T T +PT S T P
Sbjct: 123 TTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPP 182
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 429 STRPPC-TSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 575
+T PP T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 52 TTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 429 STRPPCTSPSKPCSRC---TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 575
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 109 TTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 160
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 319 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 152
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 151 DRGEHGARSIISCETGLAHT 92
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 319 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 152
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1609 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1667
Query: 151 DRGEHGARSIISCETGLAHT 92
+HG R +SCET L T
Sbjct: 1668 SIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 319 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 152
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 637 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 695
Query: 151 DRGEHGARSIISCETGLAHT 92
+HG R +SCET L T
Sbjct: 696 SIFQHGFRQALSCETQLVLT 715
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.8
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 453 PSKPCSRCTRPVVPP 497
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/83 (27%), Positives = 29/83 (34%)
Frame = +1
Query: 370 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 549
G G + PDH + R P L V R+ + GL +R PH
Sbjct: 320 GPDHTHGVSKRTAPDHPLGLSK----RTAPDHTLGVSKRTAPDHPHGLSKRTAPHHPLGL 375
Query: 550 RIRTPPRHPASGLSRSRPHRLPH 618
T P HP R+ P PH
Sbjct: 376 SKSTAPDHPHGVSKRTAPDH-PH 397
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +1
Query: 382 PQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRT 561
P G + PDH + ++H P L + R+ + G+ +R PH T
Sbjct: 192 PHGVSKRTAPDHPHGV--SKHTA--PDHTLGLSKRTGPDHTHGVSKRTAPHHPLGLSKHT 247
Query: 562 PPRHPASGLSR 594
P HP GLS+
Sbjct: 248 APDHP-HGLSK 257
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 319 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 152
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1047 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1105
Query: 151 DRGEHGARSIISCETGLAHT 92
+HG R +SCET L T
Sbjct: 1106 SIFQHGFRQALSCETQLVLT 1125
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 319 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 152
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 151 DRGEHGARSIISCETGLAHT 92
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94)
Length = 592
Score = 29.9 bits (64), Expect = 2.3
Identities = 30/103 (29%), Positives = 37/103 (35%)
Frame = +1
Query: 430 QHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHR 609
Q RRHP R R+ + G+R R P +RR RT R + R R H
Sbjct: 356 QRGERERRHPPGVAICRYRTRQVSQRGVRERRNPPGVAIRRYRT--RQVSQRGERERRHH 413
Query: 610 LPHEDPHRARLLVHYHRRAGNRS*HQGEAVLRRS*LRAGNGHR 738
P R R R R H G A+ R + G R
Sbjct: 414 -PGVAICRYRTRQVSQRGKRERRHHPGVAICRYRTRQTGESTR 455
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 438 PPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTKDTHSPTP 572
PP T P+ P S P VP + P V+P P + PTP
Sbjct: 332 PPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTP 377
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = -1
Query: 232 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 68
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 67 GNFFVAHLELVK 32
G V L+ K
Sbjct: 521 GQVDVLLLDFQK 532
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +3
Query: 441 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 539
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 441 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 545
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 226 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 92
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 412 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIR 558
DH + I+ V RH L R R+ H +R L+ + H+A LR ++
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREVQ 322
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 474 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 575
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +3
Query: 423 KHSTRPPCTSPSKPCSRCTRPVVPPVSC----WTPAT-VSPTPCPSTKDTHSPTP 572
KH + P PS P S ++P + P T + PTP P T +PTP
Sbjct: 205 KHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 292 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 116
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262
Query: 115 CETGLAHT 92
CET L T
Sbjct: 263 CETQLVLT 270
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 292 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 116
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 2 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60
Query: 115 CETGLAHT 92
CET L T
Sbjct: 61 CETQLVLT 68
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 28.7 bits (61), Expect = 5.4
Identities = 26/77 (33%), Positives = 38/77 (49%)
Frame = +1
Query: 448 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDP 627
RR+ SR+ + R RS +R R+ R R R+ R+ S SRSR + P P
Sbjct: 147 RRYRSRSDS-RPRSRYRGRSRSRSRDRYRERRPRKSRSKSLD-RSRRSRSRSYSRPSPSP 204
Query: 628 HRARLLVHYHRRAGNRS 678
+R+R RR+ +RS
Sbjct: 205 YRSRRSRSRTRRSRSRS 221
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 377 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 505
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 435 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 572
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +3
Query: 447 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 584
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 477 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 581
T VVPP+ P V P+P + + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +1
Query: 376 PQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRI 555
PQ G EDD D+V+ ++ +RH + +V+ S RA RR R +R
Sbjct: 647 PQVDGANDEDDTDNVQLESRSQGQQRHSNSKSSVQSSSELVKRARTTRRLGVSRVKIRVS 706
Query: 556 RTPPRHPASGLSRSR 600
+T + P+ +R++
Sbjct: 707 QTHSQ-PSQATARTQ 720
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +3
Query: 453 PSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PV 596
PS P S PV V T T +PT C T + P+C+ PV
Sbjct: 85 PSSPVSPLPSPVPAVAATPSQTYCTSTPTSCTPTTTCYLQVPTCILIPPV 134
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 423 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 575
K TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 428 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +1
Query: 427 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRC---LPHRAHLRRIRT-PPRHPASGLSR 594
I H++ RH S+ L R R HR + RR + H ++L R R P ++ +
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRPRNWVPPFNSTAMIF 1647
Query: 595 SRPH 606
+PH
Sbjct: 1648 GKPH 1651
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 450 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 572
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -2
Query: 528 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 355
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 354 G 352
G
Sbjct: 147 G 147
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 474 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P 593
CT P ++ P T + T P TK P PS + T P
Sbjct: 150 CTGTPEPTITSKPPVTETTTTKPETKPPKPPAPSTIPTPP 189
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 406 DPDHV-RNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRH 573
DP HV R +RHVRR PS + VR ++ +RR L R H+R RH
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDSRH--VRRNTLDSR-HVRCNTLDSRH 277
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 144 GNTARGASSPAKPALHIPEPLSTT 73
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 144 GNTARGASSPAKPALHIPEPLSTT 73
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 529 PHRAHLRRIRTPPR-HPASGLSRSRPHRLPHEDPH 630
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21)
Length = 226
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +3
Query: 417 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS--CWTPATVSPTPCPSTKDTHSPT 569
C +H T K C C + PP+ T T +PT P TK T +PT
Sbjct: 167 CRRHKTYMNIYC-RKSCGFCGKAPHPPIQEPPVTKTTTAPTEPPVTKTTTAPT 218
>SB_36012| Best HMM Match : DUF755 (HMM E-Value=0.064)
Length = 265
Score = 28.3 bits (60), Expect = 7.1
Identities = 23/89 (25%), Positives = 32/89 (35%), Gaps = 3/89 (3%)
Frame = +1
Query: 370 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 549
G P ED D + ++ R S + R+++ + R R H R
Sbjct: 82 GGPSRHNNASEDSFDSGEEEKRNKNSARKMSPINGHKSSRKSRHKSDKKERASRKRRHSR 141
Query: 550 RIRTPPRHPASGLS--RSRPHRL-PHEDP 627
P RHP+ S R R RL H P
Sbjct: 142 SESPPVRHPSGSQSGDRQRERRLHKHSSP 170
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 28.3 bits (60), Expect = 7.1
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 6/101 (5%)
Frame = -1
Query: 724 LLEVKSDVAQLLLDVTNDFPLGGGSERVAALGEDLHEVVCEVATG*VQTQDGVGECVS-- 551
++ V V ++L V + G G + + + +D V + A G V GVG+
Sbjct: 16 VVSVMMVVLVMMLMVRDSDDGGVGDDAIGRVSDD--GGVGDDADGRVSDDGGVGDDADGR 73
Query: 550 FVDGHGVGDTVAGVQHDTGG----TTGRVQREHGLDGDVHG 440
D GVGD G D GG GRV + G+ D G
Sbjct: 74 VSDDGGVGDDADGRVSDDGGVGDNAEGRVSDDGGVGDDAIG 114
>SB_41475| Best HMM Match : HSA (HMM E-Value=7.5)
Length = 195
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/76 (25%), Positives = 25/76 (32%)
Frame = +1
Query: 415 HVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSR 594
H + R H R RVR H YR HR H R+ + +
Sbjct: 119 HEYRVHRVHEYRVH--RVHEYRVRRVHEYRVHRVHEYRVHRVHEYRVHRVHEYRVHRVHE 176
Query: 595 SRPHRLPHEDPHRARL 642
R HR+ HR +
Sbjct: 177 YRVHRVHEYRVHRVHV 192
>SB_30534| Best HMM Match : EGF (HMM E-Value=0.12)
Length = 521
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 420 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTK 551
S+ ST+ P T KP + RP+ P + P + P P T+
Sbjct: 252 SQVSTKQPATERPKPRTEKPRPITQPPTTQRPRPKTRRPEPRTE 295
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 423 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 578
KH T PP S + P P+S TP+ SP S+ +HS +C
Sbjct: 2062 KHHT-PPSAHSYGTSSYDSSPQKLPISYLTPSPESPKDWSSSPSSHSDWSNC 2112
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 438 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 536
PP +P+ P T P VPP + P T P P
Sbjct: 227 PPTKAPTDPPVPPTNPPVPPTNPPAPPTNPPKP 259
>SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12)
Length = 575
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +3
Query: 438 PPCTSPSKPCSRCTRPVVPPVSCWTP-ATVSPTPCPSTKDTHSPT 569
PP T+P P P + T AT PT P+T T PT
Sbjct: 1 PPVTTPVPTTESTAVPTTAPTTEQTTVATTIPTTIPTTVPTTEPT 45
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +3
Query: 459 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 578
K C R VPPVS +P PC P +C
Sbjct: 637 KAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 417 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPAT-VSPTPCPSTKDTHSPTPS 575
C+ T P +P+ + T P + +TP T +PTP + +++PTPS
Sbjct: 40 CTTSYTPTPSYTPTPSYTPTTS--YTPTTSYTPTTSYTPTPSYTPTTSYTPTPS 91
>SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4)
Length = 781
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 441 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 587
P +P+ P S+ T PP+ TP + TP P+ + + P T
Sbjct: 19 PAPTPTTPTSQATTASGPPII--TPIPLKETPTPALESAPAAMPDATDT 65
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,399,216
Number of Sequences: 59808
Number of extensions: 707318
Number of successful extensions: 3062
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 2431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2986
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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