Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0001
         (400 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    84   2e-18
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   1.8  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   4.1  
Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein...    22   7.2  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      22   9.5  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 84.2 bits (199), Expect = 2e-18
 Identities = 34/56 (60%), Positives = 49/56 (87%)
 Frame = +1

Query: 205 ESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQF 372
           +S S +N++K+KF++ LDVQQF+P+EI+VK  +N V+VEGKHEEKQD+HG++SR F
Sbjct: 3   DSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHF 58


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 259 VQQFTPDEITVKASNNTVVVEGKHEEK 339
           ++++ P+E TV  SN   +V+G+   K
Sbjct: 68  IEKYCPEEYTVDPSNTFQLVQGRELTK 94


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -1

Query: 109 SSDPCRSAGPVVWRGARYAPSHPTNRETSLV 17
           S+DP R++GP  W     +   P++   +++
Sbjct: 213 SADPSRNSGPSSWMSGAGSVGGPSSAAAAML 243


>Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein
           protein.
          Length = 192

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 166 SYFRPWRASLARQESSSTINLTKEK 240
           S+FR WR  +   +  +TI   KE+
Sbjct: 84  SFFRAWRNCIDEGKGLATIESEKEQ 108


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 316 RQPCCST 296
           RQPCCST
Sbjct: 171 RQPCCST 177


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,790
Number of Sequences: 2352
Number of extensions: 6183
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)