Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1999X
(605 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1205 - 9693702-9694517,9694591-9695076,9697014-9697095,969... 123 1e-28
04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908 122 2e-28
03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328 117 8e-27
12_01_0297 - 2244793-2244945,2245337-2245396,2245529-2245628,224... 91 5e-19
11_01_0296 - 2222329-2222481,2222777-2222836,2222965-2223064,222... 91 5e-19
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 87 1e-17
10_08_0999 + 22121029-22121235,22121819-22122082,22122123-221223... 86 2e-17
11_01_0724 + 5981680-5981748,5982301-5982397,5982496-5982593,598... 86 2e-17
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279... 77 1e-14
07_01_0579 + 4299104-4299652,4300845-4300935,4301018-4301211,430... 77 1e-14
10_03_0034 + 7257033-7257045,7257074-7257104,7257880-7258009,725... 31 0.54
03_05_0688 + 26762668-26762893,26763027-26763101,26763865-267640... 30 1.2
03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657 30 1.6
03_05_0690 + 26778567-26778804,26778950-26779024,26779995-267800... 29 2.2
11_02_0037 - 7613632-7613727,7614452-7615507 29 3.8
07_01_1149 + 10789733-10791209,10791326-10791588,10791745-107919... 29 3.8
07_03_1429 + 26501055-26501639,26502252-26502385,26502499-26502880 28 5.0
02_05_0058 + 25478274-25478421,25478963-25479142,25479714-254800... 28 5.0
02_02_0338 + 9105725-9106581,9106950-9107091 28 5.0
05_05_0256 - 23647736-23648947 28 6.6
01_01_0571 - 4233769-4234239,4234340-4234378,4234712-4234839,423... 28 6.6
11_02_0017 + 7404766-7405239 27 8.7
08_02_1004 - 23461798-23462024,23462340-23462415,23463479-234636... 27 8.7
01_01_0136 + 1237623-1237820,1238313-1239001,1239978-1240308,124... 27 8.7
01_01_0049 - 373980-374148,374407-374451,375003-375149,375647-37... 27 8.7
>01_01_1205 -
9693702-9694517,9694591-9695076,9697014-9697095,
9697876-9698051,9698326-9698580
Length = 604
Score = 123 bits (297), Expect = 1e-28
Identities = 59/92 (64%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
Frame = +2
Query: 236 GYRDPSKKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGAD 415
G P +K+F AQK MI +CN GKPV+ ATQMLESM+K PRPTRAE +DVANA+LDG D
Sbjct: 361 GMEIPIEKIFYAQKVMIFKCNIQGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTD 420
Query: 416 CVMLSGDTAKGDYPVECVHTMA-ICKEAEAVI 508
CVMLSG+TA G YP V TMA IC +AE+ +
Sbjct: 421 CVMLSGETAAGAYPELAVRTMAKICLQAESCV 452
Score = 94.7 bits (225), Expect = 5e-20
Identities = 43/82 (52%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Frame = +3
Query: 6 VSEKDKSDLL-FGVEQGVDMIFASFIRNGAALHEIRGILGEKGKNIKIISKIENHQGMVN 182
++EKDK D+L +GV +DMI SF+R G+ L E+R +LG+ K+I ++SK+EN +G+ N
Sbjct: 283 LTEKDKEDILKWGVPNKIDMIALSFVRKGSDLVEVRKVLGKHAKSIMLMSKVENQEGVAN 342
Query: 183 LDEIIAESDGIMVARGDLGIEI 248
D+I+A+SD MVARGDLG+EI
Sbjct: 343 FDDILAQSDAFMVARGDLGMEI 364
>04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908
Length = 511
Score = 122 bits (295), Expect = 2e-28
Identities = 59/90 (65%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = +2
Query: 236 GYRDPSKKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGAD 415
G P +K+FLAQK MI +CN GKPV+ ATQMLESM+K PRPTRAE +DVANA+LDG D
Sbjct: 269 GMEIPVEKIFLAQKMMIYKCNLAGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTD 328
Query: 416 CVMLSGDTAKGDYPVECVHTMA-ICKEAEA 502
CVMLSG++A G YP V MA IC EAE+
Sbjct: 329 CVMLSGESAAGAYPEVAVKIMARICVEAES 358
Score = 95.5 bits (227), Expect = 3e-20
Identities = 44/82 (53%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
Frame = +3
Query: 6 VSEKDKSDLL-FGVEQGVDMIFASFIRNGAALHEIRGILGEKGKNIKIISKIENHQGMVN 182
++EKDK D+L +GV +DMI SF+R G+ L +R +LG+ K IK++SK+EN +G+VN
Sbjct: 191 LTEKDKEDILGWGVPNDIDMIALSFVRKGSDLVTVRQLLGQHAKRIKLMSKVENQEGVVN 250
Query: 183 LDEIIAESDGIMVARGDLGIEI 248
DEI+ E+D MVARGDLG+EI
Sbjct: 251 FDEILRETDAFMVARGDLGMEI 272
>03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328
Length = 448
Score = 117 bits (281), Expect = 8e-27
Identities = 57/89 (64%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Frame = +2
Query: 236 GYRDPSKKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGAD 415
G P +K+F AQK MI +CN GKPV+ ATQMLESM+K P PTRAE +DVANA+LDG D
Sbjct: 252 GMEIPIEKIFYAQKVMIHKCNIHGKPVVTATQMLESMIKSPCPTRAEATDVANAVLDGTD 311
Query: 416 CVMLSGDTAKGDYPVECVHTMA-ICKEAE 499
CVM SG+TA G YP V TMA IC AE
Sbjct: 312 CVMFSGETAAGAYPELAVQTMANICSRAE 340
Score = 94.7 bits (225), Expect = 5e-20
Identities = 45/82 (54%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
Frame = +3
Query: 6 VSEKDKSDLL-FGVEQGVDMIFASFIRNGAALHEIRGILGEKGKNIKIISKIENHQGMVN 182
++EKDK D+L +GV +DMI SF+R G+ L +R +LGE K+I ++SK+EN +G+ N
Sbjct: 174 LTEKDKVDILQWGVPNKIDMIALSFVRKGSDLMLVRSVLGEHAKSILLMSKVENQEGVAN 233
Query: 183 LDEIIAESDGIMVARGDLGIEI 248
+DEIIA SD MVARGDLG+EI
Sbjct: 234 VDEIIANSDAFMVARGDLGMEI 255
>12_01_0297 -
2244793-2244945,2245337-2245396,2245529-2245628,
2245712-2245779,2245922-2246017,2246156-2246244,
2246320-2246464,2246643-2246732,2246816-2246887,
2247052-2247132,2247361-2247492,2247613-2247690,
2247930-2248085,2248227-2248324,2248418-2248499
Length = 499
Score = 91.5 bits (217), Expect = 5e-19
Identities = 43/87 (49%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Frame = +2
Query: 248 PSKKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGADCVML 427
P +KVFL QK+ + +CN GKP + T++++SM RPTRAE +DVANA+LDG+D ++L
Sbjct: 260 PPEKVFLFQKSALHKCNMAGKPAV-VTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILL 318
Query: 428 SGDTAKGDYPVECVHTMA-ICKEAEAV 505
+T +G YPVE + + IC EAE V
Sbjct: 319 GAETLRGLYPVETISIVGKICAEAEKV 345
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/84 (34%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Frame = +3
Query: 6 VSEKDKSDLL-FGVEQGVDMIFASFIRNGAALHEIRGILGEKG--KNIKIISKIENHQGM 176
+S++DK + +G +D + S+ R+ + + R L + G +I +KIEN +G+
Sbjct: 176 LSDEDKEVIRKWGAPNKIDFLSLSYTRHVEDVRQAREFLSKLGDLSQTQIFAKIENVEGL 235
Query: 177 VNLDEIIAESDGIMVARGDLGIEI 248
N DEI+ E+DGI+++RG+LGI++
Sbjct: 236 NNFDEILQEADGIILSRGNLGIDL 259
>11_01_0296 -
2222329-2222481,2222777-2222836,2222965-2223064,
2223152-2223219,2223369-2223464,2223603-2223691,
2223762-2223906,2224100-2224189,2224271-2224342,
2224543-2224623,2224766-2224897,2225026-2225103,
2225280-2225435,2225521-2225618,2225712-2225793
Length = 499
Score = 91.5 bits (217), Expect = 5e-19
Identities = 43/87 (49%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Frame = +2
Query: 248 PSKKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGADCVML 427
P +KVFL QK+ + +CN GKP + T++++SM RPTRAE +DVANA+LDG+D ++L
Sbjct: 260 PPEKVFLFQKSALHKCNMAGKPAV-VTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILL 318
Query: 428 SGDTAKGDYPVECVHTMA-ICKEAEAV 505
+T +G YPVE + + IC EAE V
Sbjct: 319 GAETLRGLYPVETISIVGKICAEAEKV 345
Score = 55.6 bits (128), Expect = 3e-08
Identities = 28/84 (33%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Frame = +3
Query: 6 VSEKDKSDLL-FGVEQGVDMIFASFIRNGAALHEIRGILGEKG--KNIKIISKIENHQGM 176
+S++DK + +G +D + S+ R+ + + R L + G +I +KIEN +G+
Sbjct: 176 LSDEDKEVIRRWGAPNKIDFLSLSYTRHAEDVRQAREFLSKLGDLSQTQIFAKIENVEGL 235
Query: 177 VNLDEIIAESDGIMVARGDLGIEI 248
+ DEI+ E+DGI+++RG+LGI++
Sbjct: 236 NHFDEILQEADGIILSRGNLGIDL 259
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 87.0 bits (206), Expect = 1e-17
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Frame = +2
Query: 248 PSKKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGADCVML 427
P ++V L Q+ +I C +GK VI AT MLESM+ P PTRAE+SD+A A+ +G+D +ML
Sbjct: 384 PIEEVPLLQEEIIRMCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIML 443
Query: 428 SGDTAKGDYPVECVHTM-AICKEAEAVIGTGNSSMTL 535
SG+TA G +P++ V M + EA + G + L
Sbjct: 444 SGETAHGKFPLKAVKVMHTVALRTEATMSGGETPANL 480
Score = 74.9 bits (176), Expect = 4e-14
Identities = 35/82 (42%), Positives = 51/82 (62%)
Frame = +3
Query: 3 AVSEKDKSDLLFGVEQGVDMIFASFIRNGAALHEIRGILGEKGKNIKIISKIENHQGMVN 182
++++KD D+ FGVE VD SF+++ +HE++ L +I +I KIE+ + N
Sbjct: 302 SITDKDWDDIKFGVENQVDYYAVSFVKDAQVVHELKDYLRSSNADIHVIVKIESADSIPN 361
Query: 183 LDEIIAESDGIMVARGDLGIEI 248
L II SDG MVARGDLG E+
Sbjct: 362 LHSIITASDGAMVARGDLGAEL 383
>10_08_0999 +
22121029-22121235,22121819-22122082,22122123-22122324,
22122456-22122590,22122668-22122778,22122871-22122959,
22123237-22123299,22123461-22123636,22123785-22123887,
22124286-22124461,22124625-22124733,22124851-22124943,
22126294-22126435,22126655-22126671
Length = 628
Score = 86.2 bits (204), Expect = 2e-17
Identities = 41/97 (42%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Frame = +2
Query: 248 PSKKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGADCVML 427
P ++V L Q+ ++ C + KPVI AT MLESM+ P PTRAE+SD+A A+ +G+D +ML
Sbjct: 349 PIEEVPLLQEEIVRTCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGSDAIML 408
Query: 428 SGDTAKGDYPVECVHTM-AICKEAEAVIGTGNSSMTL 535
SG+TA G +P++ V M + + E+ + +S +L
Sbjct: 409 SGETAHGKFPLKAVKVMHTVAQRTESSLYNPTTSPSL 445
Score = 82.2 bits (194), Expect = 3e-16
Identities = 38/82 (46%), Positives = 53/82 (64%)
Frame = +3
Query: 3 AVSEKDKSDLLFGVEQGVDMIFASFIRNGAALHEIRGILGEKGKNIKIISKIENHQGMVN 182
+++EKD D+ FGVE GVD SF+++ +HE++ L +I +I KIE+ + N
Sbjct: 267 SITEKDWEDIKFGVENGVDFYAVSFVKDAKVIHELKDYLKSANADIHVIPKIESADSIPN 326
Query: 183 LDEIIAESDGIMVARGDLGIEI 248
L IIA SDG MVARGDLG E+
Sbjct: 327 LQSIIAASDGAMVARGDLGAEL 348
>11_01_0724 +
5981680-5981748,5982301-5982397,5982496-5982593,
5983535-5983690,5983986-5984063,5984135-5984266,
5984856-5984936,5985442-5985510,5985597-5985686,
5986001-5986145,5986218-5986276,5986384-5986479,
5986561-5986628,5986704-5986803,5986910-5986966,
5987179-5987337
Length = 517
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/77 (49%), Positives = 56/77 (72%)
Frame = +2
Query: 248 PSKKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGADCVML 427
P + VF++QKT I +CN GKPVI T++++SM+ RPTRAE +DVANA+LDG D ++L
Sbjct: 287 PPEDVFISQKTAIKKCNLAGKPVII-TRVVDSMIDNLRPTRAEATDVANAVLDGTDGILL 345
Query: 428 SGDTAKGDYPVECVHTM 478
+T +G YPV+ ++
Sbjct: 346 GAETHRGPYPVDAAESV 362
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/83 (36%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Frame = +3
Query: 6 VSEKDKSDL-LFGVEQGVDMIFASFIRNGAALHEIRGILGEKG-KNIKIISKIENHQGMV 179
+S+ DK + +G+ VD+I S R+ + E+R L G ++ +I +K+EN +G+
Sbjct: 204 LSDYDKEVISTWGLHNSVDIISLSHTRSAEDVRELRSFLQSHGLQDTQIYAKVENTEGLD 263
Query: 180 NLDEIIAESDGIMVARGDLGIEI 248
+ DEI+ E+DG++++RGDLGI++
Sbjct: 264 HFDEILQEADGVIISRGDLGIDL 286
>03_05_0640 - 26326832-26327166,26327295-26327529,26327665-26327908,
26328389-26328507,26328860-26329050,26329133-26329220,
26331653-26331715,26331816-26333944,26334084-26334186
Length = 1168
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/86 (41%), Positives = 56/86 (65%)
Frame = +2
Query: 236 GYRDPSKKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGAD 415
G + P +++ Q+ ++ C R+ KPVI A+Q+LESMV+ P PTRAE++DV+ A+ AD
Sbjct: 933 GVQIPLEQIPAIQEAIVDLCRRLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYAD 992
Query: 416 CVMLSGDTAKGDYPVECVHTMAICKE 493
VMLS ++A G YP + + + E
Sbjct: 993 AVMLSAESAIGAYPQKALAVLRAASE 1018
Score = 74.1 bits (174), Expect = 8e-14
Identities = 35/82 (42%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Frame = +3
Query: 6 VSEKDKSDLLFGVEQGVDMIFASFIRNGAALHEIRGILGEKG-KNIKIISKIENHQGMVN 182
+S KD +D+ FG+ +GVD I SF+++ + ++ L K ++IKI +K+E+ + + N
Sbjct: 855 LSAKDWADIEFGIAEGVDCIALSFVKDANDIKYLKTYLSRKSLEHIKIFAKVESLESLKN 914
Query: 183 LDEIIAESDGIMVARGDLGIEI 248
L +II SDG+MVARGDLG++I
Sbjct: 915 LKDIIEASDGVMVARGDLGVQI 936
>07_01_0579 +
4299104-4299652,4300845-4300935,4301018-4301211,
4301501-4301622,4302378-4302856,4303033-4303334
Length = 578
Score = 76.6 bits (180), Expect = 1e-14
Identities = 34/81 (41%), Positives = 56/81 (69%)
Frame = +2
Query: 236 GYRDPSKKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGAD 415
G + P ++V Q+ ++ C ++ KPVI A+Q+LESM++ P PTRAE++DV+ A+ AD
Sbjct: 354 GAQIPLEQVPSVQQKIVKLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRAD 413
Query: 416 CVMLSGDTAKGDYPVECVHTM 478
+MLSG++A G YP + + +
Sbjct: 414 ALMLSGESAMGRYPEKALSVL 434
Score = 74.5 bits (175), Expect = 6e-14
Identities = 34/83 (40%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Frame = +3
Query: 6 VSEKDKSDLLFGVEQGVDMIFASFIRNGAALHEIRGILG--EKGKNIKIISKIENHQGMV 179
+S KD D+ FG+ +GVD I SF+++ ++ ++ + +G +I +I+KIE+ +
Sbjct: 275 ISSKDWLDIDFGISEGVDFIAVSFVKSAEVINHLKSYIAARSRGSDIAVIAKIESIDSLK 334
Query: 180 NLDEIIAESDGIMVARGDLGIEI 248
NL+EII SDG MVARGD+G +I
Sbjct: 335 NLEEIIRASDGAMVARGDMGAQI 357
>10_03_0034 +
7257033-7257045,7257074-7257104,7257880-7258009,
7258423-7258751,7259923-7260026,7260138-7260476,
7261074-7261199,7261366-7261489,7261615-7261723,
7262171-7262251
Length = 461
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 153 KIENHQGMVNLDEIIAESDGIMVARGD 233
+++N +G+ N D+I+A+S MVAR D
Sbjct: 435 RVKNQEGVANFDDILAKSVAFMVARVD 461
>03_05_0688 +
26762668-26762893,26763027-26763101,26763865-26764032,
26764983-26765114,26765538-26765677,26765840-26765908,
26766325-26766435,26766854-26766973,26768223-26768324,
26769608-26769778,26769865-26769944,26770119-26770182
Length = 485
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 395 AILDGADCVMLSGDTAKGDYPVECVHTMAICKEAEA 502
A+LD DC+ L + KG Y C H MA+ + EA
Sbjct: 409 ALLDANDCIKLKPEWTKGHYRKGCAH-MALKEYEEA 443
>03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657
Length = 390
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 563 GSIGGFTSDTRSLKSCLCRLQLQPPCKWPWCEH 465
G++ + DT S + LC + +PP WPW +H
Sbjct: 355 GNVQAASVDTASFGNLLCGVD-EPPPFWPWPDH 386
>03_05_0690 +
26778567-26778804,26778950-26779024,26779995-26780099,
26780869-26781000,26781432-26781571,26782213-26782323,
26782690-26782812,26784166-26784267,26784536-26784546,
26784878-26785103,26785363-26785401,26785413-26785583,
26785674-26785753,26785976-26786039
Length = 538
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 395 AILDGADCVMLSGDTAKGDYPVECVHTMAICKEAEA 502
A+LD DC+ L + KG Y C H MA+ + EA
Sbjct: 462 ALLDANDCIKLKPEWTKGYYRKGCAH-MALKEYEEA 496
>11_02_0037 - 7613632-7613727,7614452-7615507
Length = 383
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 483 FARRLKL*SAQATLQ*PCVRGEAADRSRALGSHRRGGGGH 602
F R+ L AQ L P AA +G+H GGGH
Sbjct: 47 FQERMDLSGAQGELPIPMHASAAASPFAGMGAHGGAGGGH 86
>07_01_1149 +
10789733-10791209,10791326-10791588,10791745-10791954,
10792398-10792475,10792505-10792705,10792768-10792908,
10794749-10795714,10797824-10797919,10798450-10798638,
10798849-10798956
Length = 1242
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 310 FSNPIASGDHGLLGEEYLFGGISIPRS 230
FSN +A DH ++ EE++ G + P++
Sbjct: 635 FSNGMAEADHKIMSEEFVIGVTNFPQA 661
>07_03_1429 + 26501055-26501639,26502252-26502385,26502499-26502880
Length = 366
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -2
Query: 496 SLLANGHGVNTLDRIVALGSIPGEHHAVSSVEDGVGHVR-DLGSGGTGLLNHG 341
S+ G DR VA G++ G +VEDGVG V + G G G++ G
Sbjct: 237 SVFRRKFGTKKFDRGVA-GAVEGGGVGCGAVEDGVGRVAVEDGGVGRGVVEDG 288
>02_05_0058 +
25478274-25478421,25478963-25479142,25479714-25480007,
25480261-25480564,25480672-25480751,25480765-25480934
Length = 391
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 265 EYLFGGISIPRSPRATMIPSDSAIISSKLTI 173
EY FGG+ SP + + P S+I+S T+
Sbjct: 255 EYTFGGLDEEPSPESVIWPGGSSIVSPSGTV 285
>02_02_0338 + 9105725-9106581,9106950-9107091
Length = 332
Score = 28.3 bits (60), Expect = 5.0
Identities = 25/81 (30%), Positives = 34/81 (41%)
Frame = +3
Query: 357 PVPPEPRSLTWPTPSSTELTA*CSPGILPRATILSSVFTPWPFARRLKL*SAQATLQ*PC 536
P P+P+ T P+ TA +P + + P AR LK A Q
Sbjct: 9 PTKPKPKPATAAQPAPAPATARTTPPLKKPPPL-----APPTQARPLKPPPAHQYRQQQ- 62
Query: 537 VRGEAADRSRALGSHRRGGGG 599
+ + A+R R G HR GGGG
Sbjct: 63 -QQQPANRKRQYGRHRGGGGG 82
>05_05_0256 - 23647736-23648947
Length = 403
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +3
Query: 330 KCWNPWLRSPVPPEPRSLTW-PTPSSTELTA*CSPG 434
K W + +P PP+ R L W PSS T C+ G
Sbjct: 34 KSWRAAVAAPAPPQQRPLPWILVPSSGGPTFSCAVG 69
>01_01_0571 - 4233769-4234239,4234340-4234378,4234712-4234839,
4235329-4235470,4235519-4235905,4236045-4236230,
4236382-4236659,4236757-4236883,4237270-4237442,
4237610-4237657,4237734-4237767,4237837-4237965,
4238865-4238960,4239419-4239485,4240030-4240085,
4240522-4240617,4241127-4242222,4243221-4243402
Length = 1244
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 366 VGRGFLTMDSSI*VAQITGFPTRLHLAIMVF 274
+GRG T D + GF T LHL+I VF
Sbjct: 1060 LGRGTSTFDGYAIAYALMGFMTLLHLSIKVF 1090
>11_02_0017 + 7404766-7405239
Length = 157
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = -2
Query: 475 GVNTLDRIVALGSIPGEHHAVSSVEDGVGHVRDLGSGGTGLLNHGFQHLSRTDHWFSNPI 296
G +T +VA SIP + S++DG G GSG GL + G + + +
Sbjct: 12 GGSTASDLVASRSIPDDCETGGSIDDGDG-----GSGSAGLGSGGSVAIGALTAAVTTML 66
Query: 295 ASGDH 281
GDH
Sbjct: 67 DYGDH 71
>08_02_1004 -
23461798-23462024,23462340-23462415,23463479-23463610,
23463927-23464004,23464919-23465320
Length = 304
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 76 NDAKIISTPCSTPKSRSDLSFSE 8
N ++II PCS P + S + FSE
Sbjct: 89 NASRIIQVPCSVPPAPSPIYFSE 111
>01_01_0136 +
1237623-1237820,1238313-1239001,1239978-1240308,
1240614-1241351
Length = 651
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 457 CRVCSHHGHLQGG*SCNRHRQLFNDLVSEVKPPIDPAHSGAIAAV 591
CR C HHG L GG + H + +V+ K P A G + V
Sbjct: 417 CR-CGHHGQLCGGAAVYSHCAELDAIVATAKVPCAHAPYGCSSYV 460
>01_01_0049 -
373980-374148,374407-374451,375003-375149,375647-375768,
375938-376042,376123-376234,376314-376381,376617-376766,
377471-377533,377616-377741,377841-377963,378206-378387,
379398-379488
Length = 500
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = -1
Query: 545 TSDTR--SLKSCLCRLQLQPPCKWPWCEHTRQDSRPWQYPRRAS 420
T D R SL+ C +Q PP WP R W P+ S
Sbjct: 37 TRDRRAVSLRRTCCSMQQAPPPAWPGRAVVEPGRRSWDGPKPIS 80
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,673,146
Number of Sequences: 37544
Number of extensions: 442488
Number of successful extensions: 1793
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1784
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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