Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1999X
(605 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-12|CAJ30227.1| 558|Caenorhabditis elegans Hypothetical p... 144 4e-35
Z81068-4|CAE54896.1| 531|Caenorhabditis elegans Hypothetical pr... 144 4e-35
Z81068-3|CAB02983.1| 600|Caenorhabditis elegans Hypothetical pr... 144 4e-35
Z81068-2|CAB02984.1| 562|Caenorhabditis elegans Hypothetical pr... 144 4e-35
Z69385-1|CAA93424.2| 515|Caenorhabditis elegans Hypothetical pr... 142 2e-34
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 31 0.64
Z92793-1|CAB07229.1| 681|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z72503-10|CAA96601.1| 681|Caenorhabditis elegans Hypothetical p... 29 2.6
Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68882-3|CAA93106.2| 568|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 29 3.4
AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical... 29 3.4
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 29 3.4
Z92793-2|CAD56589.1| 684|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z72503-11|CAD56560.1| 684|Caenorhabditis elegans Hypothetical p... 28 4.5
Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z49126-1|CAA88938.2| 605|Caenorhabditis elegans Hypothetical pr... 28 5.9
>Z81068-12|CAJ30227.1| 558|Caenorhabditis elegans Hypothetical
protein F25H5.3d protein.
Length = 558
Score = 144 bits (349), Expect = 4e-35
Identities = 68/92 (73%), Positives = 79/92 (85%), Gaps = 1/92 (1%)
Frame = +2
Query: 236 GYRDPSKKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGAD 415
G P++KVFLAQK +I++CNR GKPVICATQMLESMV KPRPTRAE SDVANA+LDGAD
Sbjct: 325 GIEIPAEKVFLAQKMLISKCNRAGKPVICATQMLESMVHKPRPTRAEGSDVANAVLDGAD 384
Query: 416 CVMLSGDTAKGDYPVECVHTM-AICKEAEAVI 508
CVMLSG+TAKG+YPV+ + M ICKEAEA +
Sbjct: 385 CVMLSGETAKGEYPVDALKIMHYICKEAEAAV 416
Score = 125 bits (302), Expect = 2e-29
Identities = 61/82 (74%), Positives = 69/82 (84%)
Frame = +3
Query: 3 AVSEKDKSDLLFGVEQGVDMIFASFIRNGAALHEIRGILGEKGKNIKIISKIENHQGMVN 182
AVSEKD DL FGVEQGVD+IFASFIRN + IR +LGEKGK IKII+KIEN +G+ N
Sbjct: 247 AVSEKDCKDLQFGVEQGVDIIFASFIRNAEGIRTIRKVLGEKGKKIKIIAKIENQEGVDN 306
Query: 183 LDEIIAESDGIMVARGDLGIEI 248
DEII+ESDG+MVARGDLGIEI
Sbjct: 307 ADEIISESDGVMVARGDLGIEI 328
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 511 HRQLFNDLVSEVKPPIDPAHSGAIAAVEAA 600
HR+LF++L+ + P D +H+ AIAA AA
Sbjct: 418 HRRLFDELLQNTQKPTDMSHTIAIAATSAA 447
>Z81068-4|CAE54896.1| 531|Caenorhabditis elegans Hypothetical
protein F25H5.3c protein.
Length = 531
Score = 144 bits (349), Expect = 4e-35
Identities = 68/92 (73%), Positives = 79/92 (85%), Gaps = 1/92 (1%)
Frame = +2
Query: 236 GYRDPSKKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGAD 415
G P++KVFLAQK +I++CNR GKPVICATQMLESMV KPRPTRAE SDVANA+LDGAD
Sbjct: 298 GIEIPAEKVFLAQKMLISKCNRAGKPVICATQMLESMVHKPRPTRAEGSDVANAVLDGAD 357
Query: 416 CVMLSGDTAKGDYPVECVHTM-AICKEAEAVI 508
CVMLSG+TAKG+YPV+ + M ICKEAEA +
Sbjct: 358 CVMLSGETAKGEYPVDALKIMHYICKEAEAAV 389
Score = 125 bits (302), Expect = 2e-29
Identities = 61/82 (74%), Positives = 69/82 (84%)
Frame = +3
Query: 3 AVSEKDKSDLLFGVEQGVDMIFASFIRNGAALHEIRGILGEKGKNIKIISKIENHQGMVN 182
AVSEKD DL FGVEQGVD+IFASFIRN + IR +LGEKGK IKII+KIEN +G+ N
Sbjct: 220 AVSEKDCKDLQFGVEQGVDIIFASFIRNAEGIRTIRKVLGEKGKKIKIIAKIENQEGVDN 279
Query: 183 LDEIIAESDGIMVARGDLGIEI 248
DEII+ESDG+MVARGDLGIEI
Sbjct: 280 ADEIISESDGVMVARGDLGIEI 301
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 511 HRQLFNDLVSEVKPPIDPAHSGAIAAVEAA 600
HR+LF++L+ + P D +H+ AIAA AA
Sbjct: 391 HRRLFDELLQNTQKPTDMSHTIAIAATSAA 420
>Z81068-3|CAB02983.1| 600|Caenorhabditis elegans Hypothetical
protein F25H5.3b protein.
Length = 600
Score = 144 bits (349), Expect = 4e-35
Identities = 68/92 (73%), Positives = 79/92 (85%), Gaps = 1/92 (1%)
Frame = +2
Query: 236 GYRDPSKKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGAD 415
G P++KVFLAQK +I++CNR GKPVICATQMLESMV KPRPTRAE SDVANA+LDGAD
Sbjct: 367 GIEIPAEKVFLAQKMLISKCNRAGKPVICATQMLESMVHKPRPTRAEGSDVANAVLDGAD 426
Query: 416 CVMLSGDTAKGDYPVECVHTM-AICKEAEAVI 508
CVMLSG+TAKG+YPV+ + M ICKEAEA +
Sbjct: 427 CVMLSGETAKGEYPVDALKIMHYICKEAEAAV 458
Score = 125 bits (302), Expect = 2e-29
Identities = 61/82 (74%), Positives = 69/82 (84%)
Frame = +3
Query: 3 AVSEKDKSDLLFGVEQGVDMIFASFIRNGAALHEIRGILGEKGKNIKIISKIENHQGMVN 182
AVSEKD DL FGVEQGVD+IFASFIRN + IR +LGEKGK IKII+KIEN +G+ N
Sbjct: 289 AVSEKDCKDLQFGVEQGVDIIFASFIRNAEGIRTIRKVLGEKGKKIKIIAKIENQEGVDN 348
Query: 183 LDEIIAESDGIMVARGDLGIEI 248
DEII+ESDG+MVARGDLGIEI
Sbjct: 349 ADEIISESDGVMVARGDLGIEI 370
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 511 HRQLFNDLVSEVKPPIDPAHSGAIAAVEAA 600
HR+LF++L+ + P D +H+ AIAA AA
Sbjct: 460 HRRLFDELLQNTQKPTDMSHTIAIAATSAA 489
>Z81068-2|CAB02984.1| 562|Caenorhabditis elegans Hypothetical
protein F25H5.3a protein.
Length = 562
Score = 144 bits (349), Expect = 4e-35
Identities = 68/92 (73%), Positives = 79/92 (85%), Gaps = 1/92 (1%)
Frame = +2
Query: 236 GYRDPSKKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGAD 415
G P++KVFLAQK +I++CNR GKPVICATQMLESMV KPRPTRAE SDVANA+LDGAD
Sbjct: 329 GIEIPAEKVFLAQKMLISKCNRAGKPVICATQMLESMVHKPRPTRAEGSDVANAVLDGAD 388
Query: 416 CVMLSGDTAKGDYPVECVHTM-AICKEAEAVI 508
CVMLSG+TAKG+YPV+ + M ICKEAEA +
Sbjct: 389 CVMLSGETAKGEYPVDALKIMHYICKEAEAAV 420
Score = 125 bits (302), Expect = 2e-29
Identities = 61/82 (74%), Positives = 69/82 (84%)
Frame = +3
Query: 3 AVSEKDKSDLLFGVEQGVDMIFASFIRNGAALHEIRGILGEKGKNIKIISKIENHQGMVN 182
AVSEKD DL FGVEQGVD+IFASFIRN + IR +LGEKGK IKII+KIEN +G+ N
Sbjct: 251 AVSEKDCKDLQFGVEQGVDIIFASFIRNAEGIRTIRKVLGEKGKKIKIIAKIENQEGVDN 310
Query: 183 LDEIIAESDGIMVARGDLGIEI 248
DEII+ESDG+MVARGDLGIEI
Sbjct: 311 ADEIISESDGVMVARGDLGIEI 332
Score = 33.1 bits (72), Expect = 0.16
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 511 HRQLFNDLVSEVKPPIDPAHSGAIAAVEAA 600
HR+LF++L+ + P D +H+ AIAA AA
Sbjct: 422 HRRLFDELLQNTQKPTDMSHTIAIAATSAA 451
>Z69385-1|CAA93424.2| 515|Caenorhabditis elegans Hypothetical
protein ZK593.1 protein.
Length = 515
Score = 142 bits (343), Expect = 2e-34
Identities = 67/90 (74%), Positives = 76/90 (84%), Gaps = 1/90 (1%)
Frame = +2
Query: 236 GYRDPSKKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILDGAD 415
G P++KVFLAQK +IA+CN GKPVICATQMLESM+ KPRPTRAE SDVANA+LDG D
Sbjct: 282 GIEIPAEKVFLAQKMLIAKCNLAGKPVICATQMLESMITKPRPTRAECSDVANAVLDGVD 341
Query: 416 CVMLSGDTAKGDYPVECVHTM-AICKEAEA 502
CVMLSG+TAKGDYPVE + M ICKEAE+
Sbjct: 342 CVMLSGETAKGDYPVEALAIMHNICKEAES 371
Score = 121 bits (291), Expect = 5e-28
Identities = 58/82 (70%), Positives = 68/82 (82%)
Frame = +3
Query: 3 AVSEKDKSDLLFGVEQGVDMIFASFIRNGAALHEIRGILGEKGKNIKIISKIENHQGMVN 182
AV+ KD DLLFGVEQGVD+IFASFIRN +H+IR +LGEKGK+I II+KIE+ G+ N
Sbjct: 204 AVTSKDIEDLLFGVEQGVDIIFASFIRNADGIHKIRQVLGEKGKHIYIIAKIESEDGVTN 263
Query: 183 LDEIIAESDGIMVARGDLGIEI 248
DEII SDG+MVARGDLGIEI
Sbjct: 264 CDEIIEASDGVMVARGDLGIEI 285
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 31.1 bits (67), Expect = 0.64
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 227 RRSGYRDPSKKVFLAQKTMIARCNRVGKPVICATQMLESMVKKPRPTRAEISDVANAILD 406
+ SG P ++V K ++ VGK + M + V++ PT+A+ S +LD
Sbjct: 5 KASGTLPPQQQV--VHKVIMVGTGGVGKSALTLQFMYDEFVEEYEPTKAD-SYRKKVVLD 61
Query: 407 GADCVMLSGDTA-KGDY 454
G +C + DTA + DY
Sbjct: 62 GEECSIDILDTAGQEDY 78
>Z92793-1|CAB07229.1| 681|Caenorhabditis elegans Hypothetical
protein C26C6.5a protein.
Length = 681
Score = 29.1 bits (62), Expect = 2.6
Identities = 36/121 (29%), Positives = 50/121 (41%), Gaps = 1/121 (0%)
Frame = -2
Query: 361 TGLLNHGFQHLSRTDHWFSNPIASGDHGLLGEEYLFGGISIPRSPRATMIPSDSAIISSK 182
T LL FQ ++ + F IA G E+Y + P + + T+ S +A +SS
Sbjct: 485 TALLKRAFQKITAQEKEFEKKIAEGQL----EQYAEAKAAAPATSQ-TIPTSSTATVSS- 538
Query: 181 LTIPW*FSILEMILMFLPFSPRMPRISCSAAPLRMNDAKIISTPC-STPKSRSDLSFSET 5
+P PR+P+I S A STP STPKS S S +T
Sbjct: 539 ----------------IPLVPRLPQIPSSTGSSTPTQAVKTSTPIHSTPKSSSS-SAKKT 581
Query: 4 A 2
A
Sbjct: 582 A 582
>Z72503-10|CAA96601.1| 681|Caenorhabditis elegans Hypothetical
protein C26C6.5a protein.
Length = 681
Score = 29.1 bits (62), Expect = 2.6
Identities = 36/121 (29%), Positives = 50/121 (41%), Gaps = 1/121 (0%)
Frame = -2
Query: 361 TGLLNHGFQHLSRTDHWFSNPIASGDHGLLGEEYLFGGISIPRSPRATMIPSDSAIISSK 182
T LL FQ ++ + F IA G E+Y + P + + T+ S +A +SS
Sbjct: 485 TALLKRAFQKITAQEKEFEKKIAEGQL----EQYAEAKAAAPATSQ-TIPTSSTATVSS- 538
Query: 181 LTIPW*FSILEMILMFLPFSPRMPRISCSAAPLRMNDAKIISTPC-STPKSRSDLSFSET 5
+P PR+P+I S A STP STPKS S S +T
Sbjct: 539 ----------------IPLVPRLPQIPSSTGSSTPTQAVKTSTPIHSTPKSSSS-SAKKT 581
Query: 4 A 2
A
Sbjct: 582 A 582
>Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 310 TSDLCDSNAGIHG*EAPSHQSRDL*RGQRHPRRS 411
TSD D N G G ++P H+S R PRR+
Sbjct: 201 TSDRADRNGGARGNDSPLHRSSAARRHSPPPRRA 234
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 310 TSDLCDSNAGIHG*EAPSHQSRDL*RGQRHPRRS 411
TSD D N G G ++P H+S R PRR+
Sbjct: 201 TSDRADRNGGARGNDSPLHRSSAARRHSPPPRRA 234
>Z68882-3|CAA93106.2| 568|Caenorhabditis elegans Hypothetical
protein C47E12.3 protein.
Length = 568
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +3
Query: 21 KSDLLFGVEQGVDMIFASFIRNGAALHEIRGILGEKGKNIKIISKIENHQGMVN---LDE 191
KS +LFG ++ +DM SF R + R +I I +++ G + +D
Sbjct: 295 KSYILFGNQRDLDMYNESFARITTYMRRGRSRCSSLEGDIPIYVNVDSRDGSTSNTWIDS 354
Query: 192 IIAESDGIMVARGDL 236
+ A G++V G++
Sbjct: 355 LQASFAGVLVLAGEV 369
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 318 SVRLKCWNPWLRSPVPPEPRSLTWPTPSSTE 410
SV + C P + P P+P++ T PTP++T+
Sbjct: 144 SVSMTCVRPGV--PTTPDPKATTTPTPTTTK 172
>AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 310 TSDLCDSNAGIHG*EAPSHQSRDL*RGQRHPRRS 411
TSD D N G G ++P H+S R PRR+
Sbjct: 201 TSDRADRNGGARGNDSPLHRSSAARRHSPPPRRA 234
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 310 TSDLCDSNAGIHG*EAPSHQSRDL*RGQRHPRRS 411
TSD D N G G ++P H+S R PRR+
Sbjct: 201 TSDRADRNGGARGNDSPLHRSSAARRHSPPPRRA 234
>Z92793-2|CAD56589.1| 684|Caenorhabditis elegans Hypothetical
protein C26C6.5b protein.
Length = 684
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 133 LPFSPRMPRISCSAAPLRMNDAKIISTPC-STPKSRSDLSFSETA 2
+P PR+P+I S A STP STPKS S S +TA
Sbjct: 542 IPLVPRLPQIPSSTGSSTPTQAVKTSTPIHSTPKSSSS-SAKKTA 585
>Z72503-11|CAD56560.1| 684|Caenorhabditis elegans Hypothetical
protein C26C6.5b protein.
Length = 684
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 133 LPFSPRMPRISCSAAPLRMNDAKIISTPC-STPKSRSDLSFSETA 2
+P PR+P+I S A STP STPKS S S +TA
Sbjct: 542 IPLVPRLPQIPSSTGSSTPTQAVKTSTPIHSTPKSSSS-SAKKTA 585
>Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical
protein F58G1.2 protein.
Length = 445
Score = 27.9 bits (59), Expect = 5.9
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +3
Query: 51 GVDMIFASFIRNGAALHEIRGILGEKGKNIKIISKIENHQGMVNLDEIIAESDGIMV 221
GV + AS +RN +H+ R ILG G+ IK K+ ++ +N + AE D +V
Sbjct: 26 GVGELLAS-LRNPPKIHKERIILGGDGRPIK---KLRENRAALNFIDPSAELDKCIV 78
>Z49126-1|CAA88938.2| 605|Caenorhabditis elegans Hypothetical
protein DH11.1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 238 VSRSLQKGIPRPEDHDRQMQSGWKTSDLCDSN 333
VSR L+K + RPE H + S T D D +
Sbjct: 563 VSRFLEKAMKRPEQHRKDSVSSLDTDDEIDDD 594
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,262,593
Number of Sequences: 27780
Number of extensions: 310670
Number of successful extensions: 1007
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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