Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1996
         (783 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC053990-1|AAH53990.1|  455|Homo sapiens PLEKHA8 protein protein.      44   5e-04
BC002838-1|AAH02838.1|  440|Homo sapiens pleckstrin homology dom...    44   5e-04
BC009932-1|AAH09932.1|  209|Homo sapiens glycolipid transfer pro...    34   0.50 
AY372532-1|AAR87373.1|  209|Homo sapiens glycolipid transfer pro...    34   0.50 
AY372531-1|AAR85985.1|  209|Homo sapiens glycolipid transfer pro...    34   0.50 
AY372530-1|AAR85984.1|  209|Homo sapiens glycolipid transfer pro...    34   0.50 
AF209704-1|AAF33210.1|  209|Homo sapiens glycolipid transfer pro...    34   0.50 

>BC053990-1|AAH53990.1|  455|Homo sapiens PLEKHA8 protein protein.
          Length = 455

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
 Frame = +3

Query: 219 LGSCNGFGLPC*RLG-TAFAPVKFDMQGNIDRIKKNY--KFDENSCLLMLMLEEINNGKA 389
           L SC        +LG T FAPVK D+ GNI ++ + Y    +E + L  ++L E+    A
Sbjct: 336 LASCYAVVPVLDKLGPTVFAPVKMDLVGNIKKVNQKYITNKEEFTTLQKIVLHEVEADVA 395

Query: 390 PV----TEGVLWLNRALLFFE 440
            V    TE +LWL R L F +
Sbjct: 396 QVRNSATEALLWLKRGLKFLK 416


>BC002838-1|AAH02838.1|  440|Homo sapiens pleckstrin homology domain
           containing, family A (phosphoinositide binding speci
           protein.
          Length = 440

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
 Frame = +3

Query: 219 LGSCNGFGLPC*RLG-TAFAPVKFDMQGNIDRIKKNY--KFDENSCLLMLMLEEINNGKA 389
           L SC        +LG T FAPVK D+ GNI ++ + Y    +E + L  ++L E+    A
Sbjct: 336 LASCYAVVPVLDKLGPTVFAPVKMDLVGNIKKVNQKYITNKEEFTTLQKIVLHEVEADVA 395

Query: 390 PV----TEGVLWLNRALLFFE 440
            V    TE +LWL R L F +
Sbjct: 396 QVRNSATEALLWLKRGLKFLK 416


>BC009932-1|AAH09932.1|  209|Homo sapiens glycolipid transfer
           protein protein.
          Length = 209

 Score = 34.3 bits (75), Expect = 0.50
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +2

Query: 509 KAYEGSVKKYHSWVTQQLFIFICKMSPTFAQMIKS 613
           KAYE ++KKYH W+ Q++F      +P  +  +K+
Sbjct: 130 KAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKA 164



 Score = 31.5 bits (68), Expect = 3.5
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
 Frame = +3

Query: 270 FAPVKFDMQGNIDRIKKNYKFDENSCLLMLMLEEINN-------GKAPVTEGVLWLNRAL 428
           F P+K D+ GNI +IK  Y  +      +  + E+          K   T  ++WL R L
Sbjct: 42  FTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGL 101

Query: 429 LFFELVFVDILENLQAKKEINM 494
            F ++    I +  + +   N+
Sbjct: 102 RFIQVFLQSICDGERDENHPNL 123


>AY372532-1|AAR87373.1|  209|Homo sapiens glycolipid transfer
           protein protein.
          Length = 209

 Score = 34.3 bits (75), Expect = 0.50
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +2

Query: 509 KAYEGSVKKYHSWVTQQLFIFICKMSPTFAQMIKS 613
           KAYE ++KKYH W+ Q++F      +P  +  +K+
Sbjct: 130 KAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKA 164



 Score = 31.5 bits (68), Expect = 3.5
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
 Frame = +3

Query: 270 FAPVKFDMQGNIDRIKKNYKFDENSCLLMLMLEEINN-------GKAPVTEGVLWLNRAL 428
           F P+K D+ GNI +IK  Y  +      +  + E+          K   T  ++WL R L
Sbjct: 42  FTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGL 101

Query: 429 LFFELVFVDILENLQAKKEINM 494
            F ++    I +  + +   N+
Sbjct: 102 RFIQVFLQSICDGERDENHPNL 123


>AY372531-1|AAR85985.1|  209|Homo sapiens glycolipid transfer
           protein protein.
          Length = 209

 Score = 34.3 bits (75), Expect = 0.50
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +2

Query: 509 KAYEGSVKKYHSWVTQQLFIFICKMSPTFAQMIKS 613
           KAYE ++KKYH W+ Q++F      +P  +  +K+
Sbjct: 130 KAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKA 164



 Score = 31.5 bits (68), Expect = 3.5
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
 Frame = +3

Query: 270 FAPVKFDMQGNIDRIKKNYKFDENSCLLMLMLEEINN-------GKAPVTEGVLWLNRAL 428
           F P+K D+ GNI +IK  Y  +      +  + E+          K   T  ++WL R L
Sbjct: 42  FTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGL 101

Query: 429 LFFELVFVDILENLQAKKEINM 494
            F ++    I +  + +   N+
Sbjct: 102 RFIQVFLQSICDGERDENHPNL 123


>AY372530-1|AAR85984.1|  209|Homo sapiens glycolipid transfer
           protein protein.
          Length = 209

 Score = 34.3 bits (75), Expect = 0.50
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +2

Query: 509 KAYEGSVKKYHSWVTQQLFIFICKMSPTFAQMIKS 613
           KAYE ++KKYH W+ Q++F      +P  +  +K+
Sbjct: 130 KAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKA 164



 Score = 31.5 bits (68), Expect = 3.5
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
 Frame = +3

Query: 270 FAPVKFDMQGNIDRIKKNYKFDENSCLLMLMLEEINN-------GKAPVTEGVLWLNRAL 428
           F P+K D+ GNI +IK  Y  +      +  + E+          K   T  ++WL R L
Sbjct: 42  FTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGL 101

Query: 429 LFFELVFVDILENLQAKKEINM 494
            F ++    I +  + +   N+
Sbjct: 102 RFIQVFLQSICDGERDENHPNL 123


>AF209704-1|AAF33210.1|  209|Homo sapiens glycolipid transfer
           protein protein.
          Length = 209

 Score = 34.3 bits (75), Expect = 0.50
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +2

Query: 509 KAYEGSVKKYHSWVTQQLFIFICKMSPTFAQMIKS 613
           KAYE ++KKYH W+ Q++F      +P  +  +K+
Sbjct: 130 KAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKA 164



 Score = 31.5 bits (68), Expect = 3.5
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
 Frame = +3

Query: 270 FAPVKFDMQGNIDRIKKNYKFDENSCLLMLMLEEINN-------GKAPVTEGVLWLNRAL 428
           F P+K D+ GNI +IK  Y  +      +  + E+          K   T  ++WL R L
Sbjct: 42  FTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLALMWLKRGL 101

Query: 429 LFFELVFVDILENLQAKKEINM 494
            F ++    I +  + +   N+
Sbjct: 102 RFIQVFLQSICDGERDENHPNL 123


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,055,398
Number of Sequences: 237096
Number of extensions: 1874472
Number of successful extensions: 4632
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4619
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)