Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1994
         (625 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   3.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.8  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   8.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.4  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +1

Query: 373 FICYCRFTFH*LMSLNINMH 432
           ++ +C F FH ++ +N+ +H
Sbjct: 667 WLFHCHFLFHIVIGMNLIIH 686


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -2

Query: 249 FQPFFCPRFLRYRERFYAVIVNRAMTPPF*FTGF 148
           F   FC     Y+     +++N+ +TP F F  F
Sbjct: 70  FGYLFCASLSFYKAFKIGILLNQLITPLFFFHSF 103


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 180 PG*RLLRRTFRDIVETWGRKKVG 248
           P   +L R FR I  TW   +VG
Sbjct: 51  PAQGILGRDFRAIHFTWASARVG 73


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 180 PG*RLLRRTFRDIVETWGRKKVG 248
           P   +L R FR I  TW   +VG
Sbjct: 51  PAQGILGRDFRAIHFTWASARVG 73


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 180 PG*RLLRRTFRDIVETWGRKKVG 248
           P   +L R FR I  TW   +VG
Sbjct: 51  PAQGILGRDFRAIHFTWASARVG 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,023
Number of Sequences: 336
Number of extensions: 2769
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)