Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1994
         (625 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0475 + 9724676-9724936,9725518-9726216,9726273-9726596,972...    29   3.0  
03_06_0643 + 35248597-35250585,35250663-35250773,35250867-352509...    28   6.9  

>09_02_0475 +
           9724676-9724936,9725518-9726216,9726273-9726596,
           9726900-9727847
          Length = 743

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -1

Query: 208 KVLRSNRQPGDDSAILIYGILGLLKSTLLSFHYQEKEQG 92
           K L S   P D S + I G+ GL K++L    +++KE+G
Sbjct: 130 KDLLSQSNPDDLSILPIVGLPGLGKTSLARLVFEDKEEG 168


>03_06_0643 +
           35248597-35250585,35250663-35250773,35250867-35250971,
           35252215-35252304
          Length = 764

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 13/47 (27%), Positives = 27/47 (57%)
 Frame = +3

Query: 441 LLENSYTSSANASLDFMNIASFIVPK*NLIEVHSTLHTFRVYCRIPN 581
           LL+N Y    +  L+ ++ +  +V K  + E  S L+TF+++ ++ N
Sbjct: 409 LLQNKYKMEEDDDLESLSRSRVLVSKFPMEEQLSRLYTFKMFTKLQN 455


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,326,324
Number of Sequences: 37544
Number of extensions: 229548
Number of successful extensions: 359
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)