Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1994
         (625 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   2.4  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   3.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   3.2  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              21   7.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.4  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -1

Query: 166 ILIYGILGLLKSTLLSFHYQEKEQGVFFSNAYI 68
           ILI G+  ++       HY  +E  +   N+Y+
Sbjct: 780 ILINGVWMIIDPAKAMHHYPTREDNLLVCNSYV 812


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 181 GDDSAILIYGILGLLKSTLLSFHYQ 107
           GD   + +YG L LL   +L F Y+
Sbjct: 369 GDSVNVQLYGQLDLLVRKVLGFGYE 393


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 181 GDDSAILIYGILGLLKSTLLSFHYQ 107
           GD   + +YG L LL   +L F Y+
Sbjct: 369 GDSVNVQLYGQLDLLVRKVLGFGYE 393


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 422 LICTNTIVRKFVHFKRKC 475
           L C + + RKF+H   +C
Sbjct: 115 LTCEDDVHRKFLHVNDEC 132


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 559 LKVCNVLWTSIKFYFG 512
           L VCN LW  I+  +G
Sbjct: 52  LPVCNGLWRWIRLTYG 67


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 559 LKVCNVLWTSIKFYFG 512
           L VCN LW  I+  +G
Sbjct: 90  LPVCNGLWRWIRLTYG 105


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 58  LNLKCRHLKRTP 93
           LN KC  L+RTP
Sbjct: 351 LNTKCNTLERTP 362


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,274
Number of Sequences: 438
Number of extensions: 2955
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)