Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1993
         (729 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M58342-1|AAA63197.1|  550|Homo sapiens iduronate 2-sulfatase pro...    80   7e-15
L13329-1|AAA16877.1|  550|Homo sapiens iduronate-2-sulfatase pro...    80   7e-15
AF011889-1|AAC77828.1|  550|Homo sapiens iduronate 2-sulfatase p...    80   7e-15
DQ424904-1|ABD83669.1|  527|Homo sapiens NADPH oxidase 1 variant...    33   1.0  
AF233450-1|AAK82958.1| 2341|Homo sapiens pecanex-like protein 1 ...    30   9.8  
AB018348-1|BAA34525.1| 1327|Homo sapiens KIAA0805 protein protein.     30   9.8  

>M58342-1|AAA63197.1|  550|Homo sapiens iduronate 2-sulfatase
           protein.
          Length = 550

 Score = 80.2 bits (189), Expect = 7e-15
 Identities = 46/90 (51%), Positives = 55/90 (61%), Gaps = 9/90 (10%)
 Frame = +2

Query: 20  QLCFEGKSLVPF-----IENN----SNGLEAFAISQCPRPSVYPQKNSDKPRLKDITIMG 172
           +LC EGK+L+       +E +     N  E  A SQ PRPS  PQ NSDKP LKDI IMG
Sbjct: 430 ELCREGKNLLKHFRFRDLEEDPYLPGNPRELIAYSQYPRPSDIPQWNSDKPSLKDIKIMG 489

Query: 173 YSIRTKRYRYTEWISFNNTLFTKNWNNIMA 262
           YSIRT  YRYT W+ FN   F  N+++I A
Sbjct: 490 YSIRTIDYRYTVWVGFNPDEFLANFSDIHA 519


>L13329-1|AAA16877.1|  550|Homo sapiens iduronate-2-sulfatase
           protein.
          Length = 550

 Score = 80.2 bits (189), Expect = 7e-15
 Identities = 46/90 (51%), Positives = 55/90 (61%), Gaps = 9/90 (10%)
 Frame = +2

Query: 20  QLCFEGKSLVPF-----IENN----SNGLEAFAISQCPRPSVYPQKNSDKPRLKDITIMG 172
           +LC EGK+L+       +E +     N  E  A SQ PRPS  PQ NSDKP LKDI IMG
Sbjct: 430 ELCREGKNLLKHFRFRDLEEDPYLPGNPRELIAYSQYPRPSDIPQWNSDKPSLKDIKIMG 489

Query: 173 YSIRTKRYRYTEWISFNNTLFTKNWNNIMA 262
           YSIRT  YRYT W+ FN   F  N+++I A
Sbjct: 490 YSIRTIDYRYTVWVGFNPDEFLANFSDIHA 519


>AF011889-1|AAC77828.1|  550|Homo sapiens iduronate 2-sulfatase
           protein.
          Length = 550

 Score = 80.2 bits (189), Expect = 7e-15
 Identities = 46/90 (51%), Positives = 55/90 (61%), Gaps = 9/90 (10%)
 Frame = +2

Query: 20  QLCFEGKSLVPF-----IENN----SNGLEAFAISQCPRPSVYPQKNSDKPRLKDITIMG 172
           +LC EGK+L+       +E +     N  E  A SQ PRPS  PQ NSDKP LKDI IMG
Sbjct: 430 ELCREGKNLLKHFRFRDLEEDPYLPGNPRELIAYSQYPRPSDIPQWNSDKPSLKDIKIMG 489

Query: 173 YSIRTKRYRYTEWISFNNTLFTKNWNNIMA 262
           YSIRT  YRYT W+ FN   F  N+++I A
Sbjct: 490 YSIRTIDYRYTVWVGFNPDEFLANFSDIHA 519


>DQ424904-1|ABD83669.1|  527|Homo sapiens NADPH oxidase 1 variant
           NOH-1L protein.
          Length = 527

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = -3

Query: 649 NWVIIF*KKSIYLVIWL--NIYIMV*YL*KYCFSDCLYY*EDNIFFCSLT 506
           NWV+      ++LV+WL  N+++ V    KY  +D  YY    + FCS T
Sbjct: 3   NWVVNHWFSVLFLVVWLGLNVFLFVDAFLKYEKADKYYYTRKILGFCSRT 52


>AF233450-1|AAK82958.1| 2341|Homo sapiens pecanex-like protein 1
            protein.
          Length = 2341

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -1

Query: 141  LSEFFCGYTLGRGH*LIAKASSPLLLFSMKGTKLFPSKQ 25
            L   FCG  +   + L  ++S P +LFS+  +K+FP  +
Sbjct: 1197 LFSIFCGLLVAVSYHLSRQSSDPSVLFSLVQSKIFPKTE 1235


>AB018348-1|BAA34525.1| 1327|Homo sapiens KIAA0805 protein protein.
          Length = 1327

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -1

Query: 141 LSEFFCGYTLGRGH*LIAKASSPLLLFSMKGTKLFPSKQ 25
           L   FCG  +   + L  ++S P +LFS+  +K+FP  +
Sbjct: 255 LFSIFCGLLVAVSYHLSRQSSDPSVLFSLVQSKIFPKTE 293


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,330,775
Number of Sequences: 237096
Number of extensions: 1851730
Number of successful extensions: 3279
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3278
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)