Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1993
         (729 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022588-1|AAY55004.1|  502|Drosophila melanogaster IP11930p pro...    79   8e-15
BT022520-1|AAY54936.1|  516|Drosophila melanogaster IP11830p pro...    79   8e-15
BT022452-1|AAY54868.1|  359|Drosophila melanogaster IP11730p pro...    79   8e-15
AE014296-658|AAF47771.1|  512|Drosophila melanogaster CG12014-PA...    79   8e-15

>BT022588-1|AAY55004.1|  502|Drosophila melanogaster IP11930p
           protein.
          Length = 502

 Score = 78.6 bits (185), Expect = 8e-15
 Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
 Frame = +2

Query: 26  CFEGKSLVPFIENNSNGLEAFAISQCPRPSVYPQK--NSDKPRLKDITIMGYSIRTKRYR 199
           C EGKSL   +       E  A+SQ PRP + P K  NSDKP+L++I IMGYS+RT  YR
Sbjct: 383 CGEGKSLYHQLMGLGRADEHVALSQYPRPGMLPTKHPNSDKPKLRNIKIMGYSLRTDIYR 442

Query: 200 YTEWISFNNTLFTKNWNNI 256
           YT W+ F+   F+++W+++
Sbjct: 443 YTMWVRFHAQNFSRDWHDV 461


>BT022520-1|AAY54936.1|  516|Drosophila melanogaster IP11830p
           protein.
          Length = 516

 Score = 78.6 bits (185), Expect = 8e-15
 Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
 Frame = +2

Query: 26  CFEGKSLVPFIENNSNGLEAFAISQCPRPSVYPQK--NSDKPRLKDITIMGYSIRTKRYR 199
           C EGKSL   +       E  A+SQ PRP + P K  NSDKP+L++I IMGYS+RT  YR
Sbjct: 397 CGEGKSLYHQLMGLGRADEHVALSQYPRPGMLPTKHPNSDKPKLRNIKIMGYSLRTDIYR 456

Query: 200 YTEWISFNNTLFTKNWNNI 256
           YT W+ F+   F+++W+++
Sbjct: 457 YTMWVRFHAQNFSRDWHDV 475


>BT022452-1|AAY54868.1|  359|Drosophila melanogaster IP11730p
           protein.
          Length = 359

 Score = 78.6 bits (185), Expect = 8e-15
 Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
 Frame = +2

Query: 26  CFEGKSLVPFIENNSNGLEAFAISQCPRPSVYPQK--NSDKPRLKDITIMGYSIRTKRYR 199
           C EGKSL   +       E  A+SQ PRP + P K  NSDKP+L++I IMGYS+RT  YR
Sbjct: 240 CGEGKSLYHQLMGLGRADEHVALSQYPRPGMLPTKHPNSDKPKLRNIKIMGYSLRTDIYR 299

Query: 200 YTEWISFNNTLFTKNWNNI 256
           YT W+ F+   F+++W+++
Sbjct: 300 YTMWVRFHAQNFSRDWHDV 318


>AE014296-658|AAF47771.1|  512|Drosophila melanogaster CG12014-PA
           protein.
          Length = 512

 Score = 78.6 bits (185), Expect = 8e-15
 Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
 Frame = +2

Query: 26  CFEGKSLVPFIENNSNGLEAFAISQCPRPSVYPQK--NSDKPRLKDITIMGYSIRTKRYR 199
           C EGKSL   +       E  A+SQ PRP + P K  NSDKP+L++I IMGYS+RT  YR
Sbjct: 393 CGEGKSLYHQLMGLGRADEHVALSQYPRPGMLPTKHPNSDKPKLRNIKIMGYSLRTDIYR 452

Query: 200 YTEWISFNNTLFTKNWNNI 256
           YT W+ F+   F+++W+++
Sbjct: 453 YTMWVRFHAQNFSRDWHDV 471


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,684,369
Number of Sequences: 53049
Number of extensions: 552219
Number of successful extensions: 1204
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)