Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1990
(654 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 27 0.16
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 26 0.37
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 26 0.37
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 26 0.37
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 26 0.37
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 24 1.5
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 2.6
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 2.6
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 2.6
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 2.6
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 7.9
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 27.1 bits (57), Expect = 0.16
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 231 RLMYYHVFYSDCVPVNVLRALFTYLGNIVP 320
+L YY++ Y + +PV V + Y GN +P
Sbjct: 99 KLQYYNINYIEQIPVPVPIPVPVYYGNFLP 128
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 25.8 bits (54), Expect = 0.37
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 231 RLMYYHVFYSDCVPVNVLRALFTYLGNIVP 320
+L YY++ Y + +PV V + Y GN P
Sbjct: 99 KLQYYNINYIEQIPVPVPVPVPVYYGNFPP 128
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 25.8 bits (54), Expect = 0.37
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 231 RLMYYHVFYSDCVPVNVLRALFTYLGNIVP 320
+L YY++ Y + +PV V + Y GN P
Sbjct: 99 KLQYYNINYIEQIPVPVPVPVPVYYGNFPP 128
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 25.8 bits (54), Expect = 0.37
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 231 RLMYYHVFYSDCVPVNVLRALFTYLGNIVP 320
+L YY++ Y + +PV V + Y GN P
Sbjct: 99 KLQYYNINYIEQIPVPVPVPVPVYYGNFPP 128
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 25.8 bits (54), Expect = 0.37
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 231 RLMYYHVFYSDCVPVNVLRALFTYLGNIVP 320
+L YY++ Y + +PV V + Y GN P
Sbjct: 332 KLQYYNINYIEQIPVPVPVPVPVYYGNFPP 361
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 423 PNEPRTGT*PSTMQSNSILSW 361
PN+P +TMQ N +SW
Sbjct: 226 PNQPSAQCEATTMQENDKMSW 246
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 231 RLMYYHVFYSDCVPVNVLRALFTYLGNIVP 320
+L YY++ Y + +PV V + Y GN P
Sbjct: 320 KLQYYNINYIEQIPVPV--PIPIYCGNFPP 347
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 231 RLMYYHVFYSDCVPVNVLRALFTYLGNIVP 320
+L YY++ Y + +PV V + Y GN P
Sbjct: 331 KLQYYNINYIEQIPVPV--PIPIYCGNFPP 358
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 231 RLMYYHVFYSDCVPVNVLRALFTYLGNIVP 320
+L YY++ Y + +PV V + Y GN P
Sbjct: 331 KLQYYNINYIEQIPVPV--PIPIYCGNFPP 358
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 231 RLMYYHVFYSDCVPVNVLRALFTYLGNIVP 320
+L YY++ Y + +PV V + Y GN P
Sbjct: 320 KLQYYNINYIEQIPVPV--PIPIYCGNFPP 347
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 7.9
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 219 CLLVRLMYYHVFYSDCVPVNVLRALFTYLGNIVP 320
C R +YY++ Y + +P+ V Y GN P
Sbjct: 101 CNNYRKLYYNINYIEQIPIPVP----IYCGNFPP 130
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,902
Number of Sequences: 438
Number of extensions: 3149
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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