Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1989
         (795 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2445|AAF55498.1|  130|Drosophila melanogaster CG7215-PA...    65   1e-10
BT024445-1|ABC86507.1|   84|Drosophila melanogaster IP01714p pro...    34   0.19 
AE014134-2997|AAF53724.1|   84|Drosophila melanogaster CG10679-P...    34   0.19 

>AE014297-2445|AAF55498.1|  130|Drosophila melanogaster CG7215-PA,
           isoform A protein.
          Length = 130

 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
 Frame = +1

Query: 253 VQGGECLIDIYPSMLISELKRHVARKLHIPVEQQKXXXXXXXXXDDHTIQMYPNIKEGTK 432
           ++G +C I++ P+  I E+K  +  +L I    QK         ++ TI  YPNIKEGTK
Sbjct: 8   LKGKDCTIEVAPTSTILEVKHQIEAELQISATNQKLLLLGRPLNNEQTIASYPNIKEGTK 67

Query: 433 LNLVVKKP---ESLYDASFKHYKRQGMSARMLQILQTNF 540
           LNLVV KP   +S+     KHY  + ++ RM      +F
Sbjct: 68  LNLVVIKPCLRDSILRGFRKHYS-EPLAERMTNEFMADF 105


>BT024445-1|ABC86507.1|   84|Drosophila melanogaster IP01714p
           protein.
          Length = 84

 Score = 34.3 bits (75), Expect = 0.19
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +1

Query: 259 GGECLIDIYPSMLISELKRHVARKLHIPVEQQKXXXXXXXXXDDHTIQMYPNIKEGTKLN 438
           G E  IDI P+  +  +K  V  K  IP +QQ+         DD T   Y  ++ G+ L+
Sbjct: 10  GKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADY-KVQGGSVLH 68

Query: 439 LVV 447
           LV+
Sbjct: 69  LVL 71


>AE014134-2997|AAF53724.1|   84|Drosophila melanogaster CG10679-PA
           protein.
          Length = 84

 Score = 34.3 bits (75), Expect = 0.19
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +1

Query: 259 GGECLIDIYPSMLISELKRHVARKLHIPVEQQKXXXXXXXXXDDHTIQMYPNIKEGTKLN 438
           G E  IDI P+  +  +K  V  K  IP +QQ+         DD T   Y  ++ G+ L+
Sbjct: 10  GKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADY-KVQGGSVLH 68

Query: 439 LVV 447
           LV+
Sbjct: 69  LVL 71


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,722,931
Number of Sequences: 53049
Number of extensions: 596318
Number of successful extensions: 1376
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)