Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1988
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 131 6e-31
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 131 6e-31
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 111 6e-25
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 111 6e-25
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 111 6e-25
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 98 5e-21
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 98 5e-21
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 97 1e-20
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 97 1e-20
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 97 1e-20
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 86 3e-17
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 86 3e-17
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 85 4e-17
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 85 7e-17
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 85 7e-17
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 75 8e-14
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 43 3e-04
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 36 0.033
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z99281-4|CAB16509.1| 571|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z48809-2|CAA88747.1| 406|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical pr... 28 6.7
M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha... 28 6.7
AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeri... 28 6.7
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 28 6.7
AF047657-8|AAK18944.1| 328|Caenorhabditis elegans Hypothetical ... 28 8.8
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 131 bits (316), Expect = 6e-31
Identities = 63/88 (71%), Positives = 75/88 (85%)
Frame = +3
Query: 246 SSQGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEK 425
S G+VTITNDGATIL QMSVIHP AKMLVELS+AQDIEAGDGTT+VVV+AGALLD+A+
Sbjct: 62 SGNGDVTITNDGATILNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQN 121
Query: 426 LLQKGIHPTVISDGFQKALQLALQVVEK 509
LL KGIHPT IS+ FQ A A +++++
Sbjct: 122 LLSKGIHPTTISESFQSAAAEAEKILDE 149
Score = 84.2 bits (199), Expect = 1e-16
Identities = 43/86 (50%), Positives = 65/86 (75%)
Frame = +2
Query: 506 KMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLR 685
+MS+PVDL+N+ L K A TSLNSKVVSQHS +LAP+AV A++ + I S + V+L+
Sbjct: 149 EMSSPVDLSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKI---INSENDSNVNLK 205
Query: 686 DVKVIERIGGTVEDAELIQGLVIPHR 763
+K+I+++G TVE++ELI+G +I +
Sbjct: 206 MIKIIKKMGDTVEESELIEGALIDQK 231
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = +1
Query: 130 YKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQA 249
+KDK KP +R SNI AAKAVADA+RTSLGPRGMDKMIQ+
Sbjct: 23 FKDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQS 62
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 131 bits (316), Expect = 6e-31
Identities = 63/88 (71%), Positives = 75/88 (85%)
Frame = +3
Query: 246 SSQGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEK 425
S G+VTITNDGATIL QMSVIHP AKMLVELS+AQDIEAGDGTT+VVV+AGALLD+A+
Sbjct: 62 SGNGDVTITNDGATILNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQN 121
Query: 426 LLQKGIHPTVISDGFQKALQLALQVVEK 509
LL KGIHPT IS+ FQ A A +++++
Sbjct: 122 LLSKGIHPTTISESFQSAAAEAEKILDE 149
Score = 84.2 bits (199), Expect = 1e-16
Identities = 43/86 (50%), Positives = 65/86 (75%)
Frame = +2
Query: 506 KMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLR 685
+MS+PVDL+N+ L K A TSLNSKVVSQHS +LAP+AV A++ + I S + V+L+
Sbjct: 149 EMSSPVDLSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKI---INSENDSNVNLK 205
Query: 686 DVKVIERIGGTVEDAELIQGLVIPHR 763
+K+I+++G TVE++ELI+G +I +
Sbjct: 206 MIKIIKKMGDTVEESELIEGALIDQK 231
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = +1
Query: 130 YKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQA 249
+KDK KP +R SNI AAKAVADA+RTSLGPRGMDKMIQ+
Sbjct: 23 FKDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQS 62
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 111 bits (267), Expect = 6e-25
Identities = 52/87 (59%), Positives = 69/87 (79%)
Frame = +3
Query: 246 SSQGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEK 425
S G+VTITNDGATI+++M V H AK++VELS++QD E GDGTT VVV+AGALL+ AEK
Sbjct: 64 SPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEK 123
Query: 426 LLQKGIHPTVISDGFQKALQLALQVVE 506
L+ +GIHP I+DGF A + AL+ ++
Sbjct: 124 LIDRGIHPIKIADGFDLACKKALETLD 150
Score = 44.4 bits (100), Expect = 9e-05
Identities = 28/82 (34%), Positives = 48/82 (58%)
Frame = +2
Query: 509 MSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRD 688
+S + N + L++ A TSL SK+V++ A IAV A+ +V + I S V+
Sbjct: 152 ISDKFPVENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVAD-IES---KDVNFEM 207
Query: 689 VKVIERIGGTVEDAELIQGLVI 754
+K+ ++GG +ED L++G+VI
Sbjct: 208 IKMEGKVGGRLEDTILVKGIVI 229
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/26 (69%), Positives = 24/26 (92%)
Frame = +1
Query: 166 SNINAAKAVADAIRTSLGPRGMDKMI 243
S+I AA+AVA+ +RTSLGPRG+DKM+
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKML 62
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 111 bits (267), Expect = 6e-25
Identities = 52/87 (59%), Positives = 69/87 (79%)
Frame = +3
Query: 246 SSQGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEK 425
S G+VTITNDGATI+++M V H AK++VELS++QD E GDGTT VVV+AGALL+ AEK
Sbjct: 64 SPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEK 123
Query: 426 LLQKGIHPTVISDGFQKALQLALQVVE 506
L+ +GIHP I+DGF A + AL+ ++
Sbjct: 124 LIDRGIHPIKIADGFDLACKKALETLD 150
Score = 44.4 bits (100), Expect = 9e-05
Identities = 28/82 (34%), Positives = 48/82 (58%)
Frame = +2
Query: 509 MSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRD 688
+S + N + L++ A TSL SK+V++ A IAV A+ +V + I S V+
Sbjct: 152 ISDKFPVENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVAD-IES---KDVNFEM 207
Query: 689 VKVIERIGGTVEDAELIQGLVI 754
+K+ ++GG +ED L++G+VI
Sbjct: 208 IKMEGKVGGRLEDTILVKGIVI 229
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/26 (69%), Positives = 24/26 (92%)
Frame = +1
Query: 166 SNINAAKAVADAIRTSLGPRGMDKMI 243
S+I AA+AVA+ +RTSLGPRG+DKM+
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKML 62
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 111 bits (267), Expect = 6e-25
Identities = 52/87 (59%), Positives = 69/87 (79%)
Frame = +3
Query: 246 SSQGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEK 425
S G+VTITNDGATI+++M V H AK++VELS++QD E GDGTT VVV+AGALL+ AEK
Sbjct: 64 SPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEK 123
Query: 426 LLQKGIHPTVISDGFQKALQLALQVVE 506
L+ +GIHP I+DGF A + AL+ ++
Sbjct: 124 LIDRGIHPIKIADGFDLACKKALETLD 150
Score = 44.4 bits (100), Expect = 9e-05
Identities = 28/82 (34%), Positives = 48/82 (58%)
Frame = +2
Query: 509 MSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRD 688
+S + N + L++ A TSL SK+V++ A IAV A+ +V + I S V+
Sbjct: 152 ISDKFPVENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVAD-IES---KDVNFEM 207
Query: 689 VKVIERIGGTVEDAELIQGLVI 754
+K+ ++GG +ED L++G+VI
Sbjct: 208 IKMEGKVGGRLEDTILVKGIVI 229
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/26 (69%), Positives = 24/26 (92%)
Frame = +1
Query: 166 SNINAAKAVADAIRTSLGPRGMDKMI 243
S+I AA+AVA+ +RTSLGPRG+DKM+
Sbjct: 37 SHILAARAVANTLRTSLGPRGLDKML 62
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 98.3 bits (234), Expect = 5e-21
Identities = 44/85 (51%), Positives = 66/85 (77%)
Frame = +3
Query: 255 GEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQ 434
G+V +TNDGATILKQ+ V HPA K+LVEL++ QD E GDGTTSVV++A LL A++L++
Sbjct: 54 GDVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVK 113
Query: 435 KGIHPTVISDGFQKALQLALQVVEK 509
+ +HPT I +G++ A + A++ + +
Sbjct: 114 QKVHPTTIINGYRLACKEAVKYISE 138
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +1
Query: 157 IRLSNINAAKAVADAIRTSLGPRGMDKMI 243
IR N+ AA A+A+ +++SLGP G+DKM+
Sbjct: 21 IRSQNVTAAVAIANIVKSSLGPVGLDKML 49
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 98.3 bits (234), Expect = 5e-21
Identities = 44/85 (51%), Positives = 66/85 (77%)
Frame = +3
Query: 255 GEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQ 434
G+V +TNDGATILKQ+ V HPA K+LVEL++ QD E GDGTTSVV++A LL A++L++
Sbjct: 54 GDVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVK 113
Query: 435 KGIHPTVISDGFQKALQLALQVVEK 509
+ +HPT I +G++ A + A++ + +
Sbjct: 114 QKVHPTTIINGYRLACKEAVKYISE 138
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +1
Query: 157 IRLSNINAAKAVADAIRTSLGPRGMDKMI 243
IR N+ AA A+A+ +++SLGP G+DKM+
Sbjct: 21 IRSQNVTAAVAIANIVKSSLGPVGLDKML 49
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 97.1 bits (231), Expect = 1e-20
Identities = 46/91 (50%), Positives = 65/91 (71%)
Frame = +3
Query: 249 SQGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 428
S G + +TNDGATILK + V +PAAK+LV++S QD E GDGTTSV V+A LL AEKL
Sbjct: 54 SAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKL 113
Query: 429 LQKGIHPTVISDGFQKALQLALQVVEKCQLQ 521
+ + IHP I G+++AL +A + ++K ++
Sbjct: 114 VNQRIHPQTIISGYRRALGIAQESLKKSSIE 144
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/84 (32%), Positives = 48/84 (57%)
Frame = +2
Query: 503 RKMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDL 682
+K S N D LLK A T+L SK++SQH A +AV A+ + G G +L
Sbjct: 139 KKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVLR-----LKGSG---NL 190
Query: 683 RDVKVIERIGGTVEDAELIQGLVI 754
+++I+++GG++ ++ L +G ++
Sbjct: 191 DAIQIIKKLGGSMNESYLDEGFLL 214
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +1
Query: 160 RLSNINAAKAVADAIRTSLGPRGMDKMI 243
RLS+ A A+ D ++++LGP+GMDK++
Sbjct: 20 RLSSFVGAIAIGDLVKSTLGPKGMDKIL 47
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 97.1 bits (231), Expect = 1e-20
Identities = 46/91 (50%), Positives = 65/91 (71%)
Frame = +3
Query: 249 SQGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 428
S G + +TNDGATILK + V +PAAK+LV++S QD E GDGTTSV V+A LL AEKL
Sbjct: 54 SAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKL 113
Query: 429 LQKGIHPTVISDGFQKALQLALQVVEKCQLQ 521
+ + IHP I G+++AL +A + ++K ++
Sbjct: 114 VNQRIHPQTIISGYRRALGIAQESLKKSSIE 144
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/84 (32%), Positives = 48/84 (57%)
Frame = +2
Query: 503 RKMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDL 682
+K S N D LLK A T+L SK++SQH A +AV A+ + G G +L
Sbjct: 139 KKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVLR-----LKGSG---NL 190
Query: 683 RDVKVIERIGGTVEDAELIQGLVI 754
+++I+++GG++ ++ L +G ++
Sbjct: 191 DAIQIIKKLGGSMNESYLDEGFLL 214
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +1
Query: 160 RLSNINAAKAVADAIRTSLGPRGMDKMI 243
RLS+ A A+ D ++++LGP+GMDK++
Sbjct: 20 RLSSFVGAIAIGDLVKSTLGPKGMDKIL 47
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 97.1 bits (231), Expect = 1e-20
Identities = 46/91 (50%), Positives = 65/91 (71%)
Frame = +3
Query: 249 SQGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 428
S G + +TNDGATILK + V +PAAK+LV++S QD E GDGTTSV V+A LL AEKL
Sbjct: 54 SAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKL 113
Query: 429 LQKGIHPTVISDGFQKALQLALQVVEKCQLQ 521
+ + IHP I G+++AL +A + ++K ++
Sbjct: 114 VNQRIHPQTIISGYRRALGIAQESLKKSSIE 144
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/84 (32%), Positives = 48/84 (57%)
Frame = +2
Query: 503 RKMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDL 682
+K S N D LLK A T+L SK++SQH A +AV A+ + G G +L
Sbjct: 139 KKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVLR-----LKGSG---NL 190
Query: 683 RDVKVIERIGGTVEDAELIQGLVI 754
+++I+++GG++ ++ L +G ++
Sbjct: 191 DAIQIIKKLGGSMNESYLDEGFLL 214
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +1
Query: 160 RLSNINAAKAVADAIRTSLGPRGMDKMI 243
RLS+ A A+ D ++++LGP+GMDK++
Sbjct: 20 RLSSFVGAIAIGDLVKSTLGPKGMDKIL 47
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 85.8 bits (203), Expect = 3e-17
Identities = 37/88 (42%), Positives = 59/88 (67%)
Frame = +3
Query: 246 SSQGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEK 425
S G++ +T DG +L +M++ HP A M+ + S AQD GDGTTS V++ G LL AE
Sbjct: 49 SGAGDIKLTKDGNVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAES 108
Query: 426 LLQKGIHPTVISDGFQKALQLALQVVEK 509
L+ +G+HP ++++GF+ A L+++EK
Sbjct: 109 LVLEGLHPRIVTEGFEWANTKTLELLEK 136
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 169 NINAAKAVADAIRTSLGPRGMDKMI 243
NI+ A+ + D +R++LGP+G KM+
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKML 47
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 85.8 bits (203), Expect = 3e-17
Identities = 37/88 (42%), Positives = 59/88 (67%)
Frame = +3
Query: 246 SSQGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEK 425
S G++ +T DG +L +M++ HP A M+ + S AQD GDGTTS V++ G LL AE
Sbjct: 49 SGAGDIKLTKDGNVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAES 108
Query: 426 LLQKGIHPTVISDGFQKALQLALQVVEK 509
L+ +G+HP ++++GF+ A L+++EK
Sbjct: 109 LVLEGLHPRIVTEGFEWANTKTLELLEK 136
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +1
Query: 169 NINAAKAVADAIRTSLGPRGMDKMI 243
NI+ A+ + D +R++LGP+G KM+
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKML 47
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/81 (44%), Positives = 60/81 (74%)
Frame = +3
Query: 255 GEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQ 434
G + +TNDG IL++++V HPAAK ++E++R QD E GDGTTSV+++AG ++ A+ L+
Sbjct: 57 GGIVMTNDGNAILREITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLE 116
Query: 435 KGIHPTVISDGFQKALQLALQ 497
+ HPT+I +++AL+ +Q
Sbjct: 117 QKTHPTLIIKAYRQALEDMIQ 137
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/85 (28%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +2
Query: 506 KMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGAR-VDL 682
K S VD+ ++ + K + L +K++S+ + I++QA++ + V G R +D+
Sbjct: 142 KFSKTVDITDDAEIAKVVKSCLGTKMISKWMDLAVNISIQAVKTIR---VEKAGVREIDI 198
Query: 683 RDVKVIERI-GGTVEDAELIQGLVI 754
+ IE+I GG +ED+++++G+V+
Sbjct: 199 KRYCRIEKIPGGRIEDSQVVKGIVV 223
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1
Query: 157 IRLSNINAAKAVADAIRTSLGPRGMDKMI 243
+++ NINA K +AD IRTSLGPR M KM+
Sbjct: 24 VQIGNINACKTIADVIRTSLGPRAMLKML 52
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 84.6 bits (200), Expect = 7e-17
Identities = 37/83 (44%), Positives = 57/83 (68%)
Frame = +3
Query: 249 SQGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 428
S+G TI+NDGATILK + ++ PAA +V+++R+QD E GDGTTSVVV+A +L +
Sbjct: 52 SKGATTISNDGATILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPF 111
Query: 429 LQKGIHPTVISDGFQKALQLALQ 497
++ G+HP ++ KA + L+
Sbjct: 112 IEDGVHPQLLIRAIGKACEKTLK 134
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = +1
Query: 163 LSNINAAKAVADAIRTSLGPRGMDKMIQAAK 255
+SNINA + VAD+IRT+LGPRG+DK+I +K
Sbjct: 23 ISNINACQVVADSIRTTLGPRGLDKLIVDSK 53
Score = 33.1 bits (72), Expect = 0.23
Identities = 22/70 (31%), Positives = 39/70 (55%)
Frame = +2
Query: 539 DALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGT 718
+ L+K AAT+L+SK+VSQ A + V A V+ + A + L + + + GG
Sbjct: 151 EMLVKCAATTLSSKLVSQERLFFANMIVDA--------VNTLDAHLPLNMIGIKKVNGGN 202
Query: 719 VEDAELIQGL 748
+ ++ LI+G+
Sbjct: 203 LHESRLIKGV 212
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 84.6 bits (200), Expect = 7e-17
Identities = 37/83 (44%), Positives = 57/83 (68%)
Frame = +3
Query: 249 SQGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 428
S+G TI+NDGATILK + ++ PAA +V+++R+QD E GDGTTSVVV+A +L +
Sbjct: 52 SKGATTISNDGATILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPF 111
Query: 429 LQKGIHPTVISDGFQKALQLALQ 497
++ G+HP ++ KA + L+
Sbjct: 112 IEDGVHPQLLIRAIGKACEKTLK 134
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = +1
Query: 163 LSNINAAKAVADAIRTSLGPRGMDKMIQAAK 255
+SNINA + VAD+IRT+LGPRG+DK+I +K
Sbjct: 23 ISNINACQVVADSIRTTLGPRGLDKLIVDSK 53
Score = 33.1 bits (72), Expect = 0.23
Identities = 22/70 (31%), Positives = 39/70 (55%)
Frame = +2
Query: 539 DALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGT 718
+ L+K AAT+L+SK+VSQ A + V A V+ + A + L + + + GG
Sbjct: 151 EMLVKCAATTLSSKLVSQERLFFANMIVDA--------VNTLDAHLPLNMIGIKKVNGGN 202
Query: 719 VEDAELIQGL 748
+ ++ LI+G+
Sbjct: 203 LHESRLIKGV 212
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 74.5 bits (175), Expect = 8e-14
Identities = 30/79 (37%), Positives = 56/79 (70%)
Frame = +3
Query: 267 ITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIH 446
+TND ATILK++ + HPAA++++ + Q+ + GD T +VV++A ALL+ A L+ G+
Sbjct: 64 VTNDAATILKELEIQHPAARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMT 123
Query: 447 PTVISDGFQKALQLALQVV 503
P ++ G+++A + AL+++
Sbjct: 124 PQEVAAGYEQAAEKALEIL 142
Score = 31.5 bits (68), Expect = 0.71
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 169 NINAAKAVADAIRTSLGPRGMDKMIQAAKEKL 264
NI A +A IR++ GP GM+KM+ EKL
Sbjct: 31 NIEACTELASQIRSAYGPNGMNKMVINHIEKL 62
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Frame = +3
Query: 249 SQGEVTITNDGATILKQMSVIHP----AAKMLVELSRAQDIEAGDGTTSVVVIAGALLDS 416
S G IT DG T+ K + + AK++ +++ + EAGDGTT V+A A+
Sbjct: 58 SWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAGDGTTCATVLARAIAKE 117
Query: 417 AEKLLQKGIHPTVISDGFQKALQLALQVVEK 509
+ +++G + I G A+++ + ++K
Sbjct: 118 GFESIRQGGNAVEIRRGVMNAVEVVVAELKK 148
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 35.9 bits (79), Expect = 0.033
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Frame = +3
Query: 249 SQGEVTITNDGATILKQMSVIHP----AAKMLVELSRAQDIEAGDGTTSVVVIAGALL-D 413
S G IT DG T+ K + + AK++ +++ + EAGDGTT V+ A+ +
Sbjct: 58 SWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAGDGTTCATVLTRAIAKE 117
Query: 414 SAEKLLQKGIHPTVISDGFQKALQLALQVVEK 509
E+ +G + I G A+++ + ++K
Sbjct: 118 GFERHSSRG-NAVEIRRGVMNAVEVVVAELKK 148
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 502 SKNVNSSGLE**RCFAQGSCNITKFQSSFTTLNYFGTH 615
SK+++ L+ C Q C+ KF++SF +NYF H
Sbjct: 668 SKDISGEQLQAILCGKQTWCDSGKFENSFDLINYFSAH 705
>Z99281-4|CAB16509.1| 571|Caenorhabditis elegans Hypothetical
protein Y57G11C.7 protein.
Length = 571
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = -1
Query: 545 KHLHYSSPLELTFFDHL*SQLKGFLETIRNYSWMYAFLKKFLSRI-QQRTSNNNY*CCSI 369
+ HY+ ++F +H S + G+ ++ + ++ + + +I + +T NN C
Sbjct: 198 RRTHYAGQFIVSFEEHCISVIFGYFSSVSSSEFVSSDRNQIFIKICRNKTKNNYNKCFKR 257
Query: 368 TSFNILSTR*FYQHF 324
N S + F HF
Sbjct: 258 IQLNFQSEKSFLGHF 272
>Z48809-2|CAA88747.1| 406|Caenorhabditis elegans Hypothetical
protein T01E8.4 protein.
Length = 406
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -2
Query: 787 DEGHSHWLPMRNDQSLD*LSIFYSSTY--TLNDFHISEVNSCTNTTNNRFHYCSNCLHCN 614
D HS W+ +S + FY++++ T+ +HI++ + N + + C+ C+
Sbjct: 154 DTAHSGWIWNMAQESTS--TNFYTTSWDSTVKSWHITDNGALQNLNSVNVGSAAQCISCS 211
Query: 613 GCQN 602
G +N
Sbjct: 212 GNEN 215
>Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical
protein T19C4.6 protein.
Length = 357
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 282 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 428
+T+LKQM +IH + E+S +++ + V GALLD ++L
Sbjct: 47 STVLKQMKIIHNSGFSQEEISNKRNVVC----ANTVQAMGALLDGMKQL 91
>Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical
protein R08D7.1 protein.
Length = 458
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 94 AGGDAIKANSSVYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAAKEKLQ 267
A GD K KDK+KP+ +RL +A +V A +G + I+ K+ ++
Sbjct: 15 ASGDIEKKKKKKNKDKNKPSGLRLIEEDAFLSVDAAKTRDIGSDEEREEIEVLKQSVK 72
>M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 357
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 282 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 428
+T+LKQM +IH + E+S +++ + V GALLD ++L
Sbjct: 47 STVLKQMKIIHNSGFSQEEISNKRNVVC----ANTVQAMGALLDGMKQL 91
>AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 282 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKL 428
+T+LKQM +IH + E+S +++ + V GALLD ++L
Sbjct: 47 STVLKQMKIIHNSGFSQEEISNKRNVVC----ANTVQAMGALLDGMKQL 91
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 299 NECYSSSCKNVGRIISCSRY*SW*WNNISSCYC 397
N + SC+ R SCSR SW SS +C
Sbjct: 9 NYAFEDSCRKSTRTSSCSRRDSWNGETRSSSHC 41
>AF047657-8|AAK18944.1| 328|Caenorhabditis elegans Hypothetical
protein F37B4.10 protein.
Length = 328
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 541 CFAQGSCN-ITKFQSSFTTLNYFGTHCSASNSSSNGTYC*WCWC 669
C+A+ + KF T++ FGT +SSS C W C
Sbjct: 14 CYAREKVECLEKFTKRVNTIDSFGTSFLVMSSSSQNIKCGWNGC 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,867,945
Number of Sequences: 27780
Number of extensions: 338555
Number of successful extensions: 1168
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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