Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1985
(793 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY121633-1|AAM51960.1| 219|Drosophila melanogaster GM02293p pro... 57 2e-08
AF055900-1|AAC14276.1| 228|Drosophila melanogaster clathrin lig... 57 2e-08
AE014296-3305|AAF49047.1| 219|Drosophila melanogaster CG6948-PA... 57 2e-08
M24441-1|AAA28652.1| 975|Drosophila melanogaster protein ( D.me... 31 1.4
AY094959-1|AAM11312.1| 975|Drosophila melanogaster SD02406p pro... 31 1.4
AE013599-2234|AAF58029.1| 975|Drosophila melanogaster CG7765-PA... 31 1.4
BT014631-1|AAT27255.1| 890|Drosophila melanogaster SD09860p pro... 30 3.2
AE014298-2844|AAF48957.1| 890|Drosophila melanogaster CG12202-P... 30 3.2
AY095177-1|AAM12270.1| 487|Drosophila melanogaster GH12942p pro... 29 7.3
AE013599-2061|AAF58135.2| 765|Drosophila melanogaster CG8179-PA... 29 7.3
>AY121633-1|AAM51960.1| 219|Drosophila melanogaster GM02293p
protein.
Length = 219
Score = 57.2 bits (132), Expect = 2e-08
Identities = 29/65 (44%), Positives = 36/65 (55%)
Frame = +1
Query: 307 REEPEKIKIWREEQXXXXXXXXXXXXXXXXXMLQIAKKELEDWYKSHEEQISKTKAANRE 486
REEPEKI+ WREEQ + Q +KKEL+DW + E ISKTK A+R
Sbjct: 100 REEPEKIRKWREEQKQRLEEKDIEEERKKEELRQQSKKELDDWLRQIGESISKTKLASRN 159
Query: 487 SAKNA 501
+ K A
Sbjct: 160 AEKQA 164
Score = 50.0 bits (114), Expect = 4e-06
Identities = 24/49 (48%), Positives = 35/49 (71%), Gaps = 4/49 (8%)
Frame = +3
Query: 507 RQARGSES-SVEEGNEWARVSELCDFGP---RRGRDVARLRSIVLQLKQ 641
+QA E+ ++E G EW R+++LCDF P + G+DV+R+RSI L LKQ
Sbjct: 162 KQAATLENGTIEPGTEWERIAKLCDFNPKVNKAGKDVSRMRSIYLHLKQ 210
Score = 48.0 bits (109), Expect = 1e-05
Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Frame = +2
Query: 62 DFGDSFVEPE-VDPAADFLAREQNQLAGLEDELE--TSAPPPAIST 190
DFGD F E VDPAA+FLAREQ+ L LE E+ +++ PPA ST
Sbjct: 2 DFGDDFAAKEDVDPAAEFLAREQSALGDLEAEITGGSASAPPAAST 47
>AF055900-1|AAC14276.1| 228|Drosophila melanogaster clathrin light
chain protein.
Length = 228
Score = 57.2 bits (132), Expect = 2e-08
Identities = 29/65 (44%), Positives = 36/65 (55%)
Frame = +1
Query: 307 REEPEKIKIWREEQXXXXXXXXXXXXXXXXXMLQIAKKELEDWYKSHEEQISKTKAANRE 486
REEPEKI+ WREEQ + Q +KKEL+DW + E ISKTK A+R
Sbjct: 100 REEPEKIRKWREEQKQRLEEKDIEEERKKEELRQQSKKELDDWLRQIGESISKTKLASRN 159
Query: 487 SAKNA 501
+ K A
Sbjct: 160 AEKQA 164
Score = 50.0 bits (114), Expect = 4e-06
Identities = 24/49 (48%), Positives = 35/49 (71%), Gaps = 4/49 (8%)
Frame = +3
Query: 507 RQARGSES-SVEEGNEWARVSELCDFGP---RRGRDVARLRSIVLQLKQ 641
+QA E+ ++E G EW R+++LCDF P + G+DV+R+RSI L LKQ
Sbjct: 162 KQAATLENGTIEPGTEWERIAKLCDFNPKVNKAGKDVSRMRSIYLHLKQ 210
Score = 48.0 bits (109), Expect = 1e-05
Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Frame = +2
Query: 62 DFGDSFVEPE-VDPAADFLAREQNQLAGLEDELE--TSAPPPAIST 190
DFGD F E VDPAA+FLAREQ+ L LE E+ +++ PPA ST
Sbjct: 2 DFGDDFAAKEDVDPAAEFLAREQSALGDLEAEITGGSASAPPAAST 47
>AE014296-3305|AAF49047.1| 219|Drosophila melanogaster CG6948-PA
protein.
Length = 219
Score = 57.2 bits (132), Expect = 2e-08
Identities = 29/65 (44%), Positives = 36/65 (55%)
Frame = +1
Query: 307 REEPEKIKIWREEQXXXXXXXXXXXXXXXXXMLQIAKKELEDWYKSHEEQISKTKAANRE 486
REEPEKI+ WREEQ + Q +KKEL+DW + E ISKTK A+R
Sbjct: 100 REEPEKIRKWREEQKQRLEEKDIEEERKKEELRQQSKKELDDWLRQIGESISKTKLASRN 159
Query: 487 SAKNA 501
+ K A
Sbjct: 160 AEKQA 164
Score = 50.0 bits (114), Expect = 4e-06
Identities = 24/49 (48%), Positives = 35/49 (71%), Gaps = 4/49 (8%)
Frame = +3
Query: 507 RQARGSES-SVEEGNEWARVSELCDFGP---RRGRDVARLRSIVLQLKQ 641
+QA E+ ++E G EW R+++LCDF P + G+DV+R+RSI L LKQ
Sbjct: 162 KQAATLENGTIEPGTEWERIAKLCDFNPKVNKAGKDVSRMRSIYLHLKQ 210
Score = 48.0 bits (109), Expect = 1e-05
Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Frame = +2
Query: 62 DFGDSFVEPE-VDPAADFLAREQNQLAGLEDELE--TSAPPPAIST 190
DFGD F E VDPAA+FLAREQ+ L LE E+ +++ PPA ST
Sbjct: 2 DFGDDFAAKEDVDPAAEFLAREQSALGDLEAEITGGSASAPPAAST 47
>M24441-1|AAA28652.1| 975|Drosophila melanogaster protein (
D.melanogaster kinesinheavy chain mRNA, complete cds. ).
Length = 975
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 415 KKELEDWYKSHEEQISKTKAANRESAKNA-ERDKLEDLKVVWRKEMN 552
K+ LE+ S E+ +K KAA SA NA E+ + E+L+ ++ +M+
Sbjct: 681 KRTLEEQIDSLREECAKLKAAEHVSAVNAEEKQRAEELRSMFDSQMD 727
>AY094959-1|AAM11312.1| 975|Drosophila melanogaster SD02406p
protein.
Length = 975
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 415 KKELEDWYKSHEEQISKTKAANRESAKNA-ERDKLEDLKVVWRKEMN 552
K+ LE+ S E+ +K KAA SA NA E+ + E+L+ ++ +M+
Sbjct: 681 KRTLEEQIDSLREECAKLKAAEHVSAVNAEEKQRAEELRSMFDSQMD 727
>AE013599-2234|AAF58029.1| 975|Drosophila melanogaster CG7765-PA
protein.
Length = 975
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 415 KKELEDWYKSHEEQISKTKAANRESAKNA-ERDKLEDLKVVWRKEMN 552
K+ LE+ S E+ +K KAA SA NA E+ + E+L+ ++ +M+
Sbjct: 681 KRTLEEQIDSLREECAKLKAAEHVSAVNAEEKQRAEELRSMFDSQMD 727
>BT014631-1|AAT27255.1| 890|Drosophila melanogaster SD09860p
protein.
Length = 890
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 604 WHAYGQLCFSSSKLDLAQTTHHVLLKWLEITSQFV*YLIILSVRFR 741
WH YG L S K D A + LKW + Q + L +L ++ R
Sbjct: 84 WHVYGLLQRSDKKYDEAIKCYRNALKWEKDNLQILKDLSLLQIQMR 129
>AE014298-2844|AAF48957.1| 890|Drosophila melanogaster CG12202-PA
protein.
Length = 890
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 604 WHAYGQLCFSSSKLDLAQTTHHVLLKWLEITSQFV*YLIILSVRFR 741
WH YG L S K D A + LKW + Q + L +L ++ R
Sbjct: 84 WHVYGLLQRSDKKYDEAIKCYRNALKWEKDNLQILKDLSLLQIQMR 129
>AY095177-1|AAM12270.1| 487|Drosophila melanogaster GH12942p
protein.
Length = 487
Score = 29.1 bits (62), Expect = 7.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 418 KELEDWYKSHEEQISKTKAANRESAKNAERDKLEDLK 528
K E+W + E+++ K K ES + ++RDKL K
Sbjct: 89 KNWENWERIREQKLEKMKGICFESYRQSKRDKLLQAK 125
>AE013599-2061|AAF58135.2| 765|Drosophila melanogaster CG8179-PA
protein.
Length = 765
Score = 29.1 bits (62), Expect = 7.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 418 KELEDWYKSHEEQISKTKAANRESAKNAERDKLEDLK 528
K E+W + E+++ K K ES + ++RDKL K
Sbjct: 89 KNWENWERIREQKLEKMKGICFESYRQSKRDKLLQAK 125
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,880,673
Number of Sequences: 53049
Number of extensions: 702410
Number of successful extensions: 2682
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2676
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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