Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1984
         (784 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075178-1|AAL68048.1|  326|Drosophila melanogaster AT12771p pro...    31   2.3  
AE014134-2093|AAF53119.1|  326|Drosophila melanogaster CG14936-P...    31   2.3  
AY051563-1|AAK92987.1|  634|Drosophila melanogaster GH21160p pro...    29   9.5  
AE013599-1301|AAM68737.1|  634|Drosophila melanogaster CG30023-P...    29   9.5  

>AY075178-1|AAL68048.1|  326|Drosophila melanogaster AT12771p
           protein.
          Length = 326

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 671 CIGCTSNFLPSSSSTVAGVPK-PAPSVRAEGVNA 769
           C  C +NFLPS   ++ G  + P P++  + +NA
Sbjct: 189 CDSCFNNFLPSEGQSIGGNSRQPFPALTVDSINA 222


>AE014134-2093|AAF53119.1|  326|Drosophila melanogaster CG14936-PA
           protein.
          Length = 326

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 671 CIGCTSNFLPSSSSTVAGVPK-PAPSVRAEGVNA 769
           C  C +NFLPS   ++ G  + P P++  + +NA
Sbjct: 189 CDSCFNNFLPSEGQSIGGNSRQPFPALTVDSINA 222


>AY051563-1|AAK92987.1|  634|Drosophila melanogaster GH21160p
           protein.
          Length = 634

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +2

Query: 404 RDSPHRRRPMEPLKRIEGSARRFFFHT*ADSLERL 508
           RD  HR RP +PL++ +   R     T A S+E L
Sbjct: 469 RDRQHRERPRDPLQQQQQLHREHLMSTHARSVEHL 503


>AE013599-1301|AAM68737.1|  634|Drosophila melanogaster CG30023-PA
           protein.
          Length = 634

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +2

Query: 404 RDSPHRRRPMEPLKRIEGSARRFFFHT*ADSLERL 508
           RD  HR RP +PL++ +   R     T A S+E L
Sbjct: 469 RDRQHRERPRDPLQQQQQLHREHLMSTHARSVEHL 503


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,552,108
Number of Sequences: 53049
Number of extensions: 629933
Number of successful extensions: 1533
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1533
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)