Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1983
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr... 39 0.004
AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical... 39 0.004
Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical pr... 38 0.005
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ... 35 0.066
Z69794-3|CAA93680.1| 747|Caenorhabditis elegans Hypothetical pr... 34 0.11
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 33 0.15
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 33 0.15
Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF125964-7|AAD14750.1| 350|Caenorhabditis elegans Hypothetical ... 30 1.9
AC024780-3|AAF60571.2| 300|Caenorhabditis elegans Serpentine re... 30 1.9
Z70204-5|CAI46566.1| 379|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z70204-4|CAA94114.2| 437|Caenorhabditis elegans Hypothetical pr... 29 3.3
AY305832-1|AAR11977.1| 437|Caenorhabditis elegans nuclear recep... 29 3.3
AY305831-1|AAR11976.1| 437|Caenorhabditis elegans nuclear recep... 29 3.3
AF273775-1|AAG15124.1| 383|Caenorhabditis elegans nuclear recep... 29 3.3
AF273774-1|AAG15123.1| 433|Caenorhabditis elegans nuclear recep... 29 3.3
U88182-3|ABD63240.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.3
AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical ... 28 5.7
AY204190-1|AAO39194.1| 382|Caenorhabditis elegans nuclear recep... 28 7.5
AF022978-5|AAG24181.2| 382|Caenorhabditis elegans Nuclear hormo... 28 7.5
AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical... 28 7.5
U38378-2|AAR12974.1| 403|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF125964-5|AAP13765.1| 722|Caenorhabditis elegans Hypothetical ... 27 9.9
AF125964-2|AAD14754.1| 726|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 11/60 (18%)
Frame = +3
Query: 3 NWGLIVFKESEL-----------SNCKTVLLVNEVLYQWLGVYVTPAWWSDAHINKALVN 149
NWGL+ F++S L +++ +E+ +QW G VT WW++ +N+ N
Sbjct: 468 NWGLVTFRDSALLFNERKASVVAKEHIALIICHEIAHQWFGNLVTMDWWNEVFLNEGFAN 527
>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical
protein T16G12.1 protein.
Length = 1890
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 11/60 (18%)
Frame = +3
Query: 3 NWGLIVFKESELSNCKTVL-----------LVNEVLYQWLGVYVTPAWWSDAHINKALVN 149
NWGLI++K ++ T + + +E+ +QW G VT AWW D +N+ +
Sbjct: 358 NWGLIIYKYQYIAYNPTTMTTRNMEAAAKVMCHELAHQWFGDLVTTAWWDDLFLNEGFAD 417
Score = 32.7 bits (71), Expect = 0.26
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 66 NEVLYQWLGVYVTPAWWSDAHINK 137
+EV++QW G VT WW+D +N+
Sbjct: 1316 HEVVHQWFGDIVTLDWWNDIFLNE 1339
>AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 11/60 (18%)
Frame = +3
Query: 3 NWGLIVFKESEL-----------SNCKTVLLVNEVLYQWLGVYVTPAWWSDAHINKALVN 149
NWGL+ F++S L +++ +E+ +QW G VT WW++ +N+ N
Sbjct: 468 NWGLVTFRDSALLFNERKASVVAKEHIALIICHEIAHQWFGNLVTMDWWNEVFLNEGFAN 527
>Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical
protein T07F10.1b protein.
Length = 976
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 11/56 (19%)
Frame = +3
Query: 3 NWGLIVFKESEL-----------SNCKTVLLVNEVLYQWLGVYVTPAWWSDAHINK 137
NWGLI ++ES L V++ +E+ +QW G VT WW+D +N+
Sbjct: 352 NWGLITYRESALLYDPRIYSGSQKRRVAVVIAHELAHQWFGNLVTLKWWNDLWLNE 407
>Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical
protein T07F10.1a protein.
Length = 988
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 11/56 (19%)
Frame = +3
Query: 3 NWGLIVFKESEL-----------SNCKTVLLVNEVLYQWLGVYVTPAWWSDAHINK 137
NWGLI ++ES L V++ +E+ +QW G VT WW+D +N+
Sbjct: 364 NWGLITYRESALLYDPRIYSGSQKRRVAVVIAHELAHQWFGNLVTLKWWNDLWLNE 419
>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
protein Y42A5A.1 protein.
Length = 1045
Score = 34.7 bits (76), Expect = 0.066
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 11/64 (17%)
Frame = +3
Query: 3 NWGLIVFKESE---------LSNCKTV--LLVNEVLYQWLGVYVTPAWWSDAHINKALVN 149
NWGLI +++ +S V ++ +E+ +QW G VT WW+D +N+
Sbjct: 426 NWGLITIRQTNGLYTEGRFAISQKHDVQEIVAHELAHQWFGNLVTMKWWNDLWLNEGFAT 485
Query: 150 SLAV 161
++V
Sbjct: 486 LISV 489
>Z69794-3|CAA93680.1| 747|Caenorhabditis elegans Hypothetical
protein R03G8.6 protein.
Length = 747
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 3 NWGLIVFKESELSNCK---TVLLVNEVLYQWLGVYVTPAWWSDAHINKALVN 149
NWGL++ L T ++++E+ +QW G VT +W +N+ +
Sbjct: 304 NWGLVIHNAYSLIGDPMDVTEIVIHEIAHQWFGNLVTMKYWDHIWLNEGFAS 355
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 320 RTLNYTLGGNTLKKGLRTFLLEHKYKTFVGDDIWNALTKSA 442
R L Y L +KGLR +L +Y V D+W AL++++
Sbjct: 407 RMLCYYLSEPVFQKGLRLYLKRFQYSNAVTQDLWTALSEAS 447
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 11/60 (18%)
Frame = +3
Query: 3 NWGLIVFKESEL----------SNCKTVLLV-NEVLYQWLGVYVTPAWWSDAHINKALVN 149
NWGL+ ++E L + L+V +E+ + W G VT WW+D + + +
Sbjct: 281 NWGLVTYREIALLVDPGVTSTRQKSRVALVVAHELAHLWFGNLVTMKWWTDLWLKEGFAS 340
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform b
protein.
Length = 948
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 320 RTLNYTLGGNTLKKGLRTFLLEHKYKTFVGDDIWNALTKSA 442
R L Y L +KGLR +L +Y V D+W AL++++
Sbjct: 471 RMLCYYLSEPVFQKGLRLYLKRFQYSNAVTQDLWTALSEAS 511
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 11/60 (18%)
Frame = +3
Query: 3 NWGLIVFKESEL----------SNCKTVLLV-NEVLYQWLGVYVTPAWWSDAHINKALVN 149
NWGL+ ++E L + L+V +E+ + W G VT WW+D + + +
Sbjct: 345 NWGLVTYREIALLVDPGVTSTRQKSRVALVVAHELAHLWFGNLVTMKWWTDLWLKEGFAS 404
>Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical
protein AC3.5 protein.
Length = 1090
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/94 (20%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Frame = +2
Query: 242 VQQTYPHSRITGIKQDAIATKITLLFRTLNYTLGGNTLKKGLRTFLLEHKYKTFVGDDIW 421
V+ + + I I + I K + R + ++G N K +R+F+ ++ D +W
Sbjct: 562 VKNVFSSADIAEIDHEFIGKKGAAVLRMIQKSVGVNVFNKAIRSFVSSYRSAYPYDDGLW 621
Query: 422 NALTKSAIDDGKI----SKDIDLKIVAKSWIEKI 511
+ K+ GK+ ++ +D+ +W+++I
Sbjct: 622 KSFEKAL--GGKLKGWNNEPLDVAKFVNTWVDQI 653
>Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical
protein R03G8.4 protein.
Length = 786
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Frame = +3
Query: 3 NWGLIVFKESEL--------SNCKTVLLVNEVLYQWLGVYVTPAWWSDAHINKALVNSLA 158
NWGLIV + L ++ + ++ +E+ +QW G VT +W +N+ +
Sbjct: 302 NWGLIVHQAYTLIENLMPGNTDIISEVVAHEIAHQWFGNLVTMKFWDQLWLNEGFATYMT 361
Query: 159 VEIYFKINNGSDMD 200
Y ++ D D
Sbjct: 362 AYGYTFLDPNYDRD 375
>Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.1 protein.
Length = 432
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = -2
Query: 618 PVRVWKVVWTIT*EYFLSKH---NSFPIILPFNSQKWQSI-FSIQLLATIFRSMSLL 460
P + + V WT+ +Y+ K N F I++PF ++ W+S+ +I L +FR+ L+
Sbjct: 274 PRKHFTVDWTM--KYYACKTRQPNKFNIVIPFYARIWRSVGEAITLKTEVFRNAKLI 328
>AF125964-7|AAD14750.1| 350|Caenorhabditis elegans Hypothetical
protein W03G1.2 protein.
Length = 350
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 472 RSENCGQELDRENRLPFLTVERKNDGKTVVLTQKVFLRDRPHDLPDADRL 621
+S + +D+ + + RKND +TV +K + H++P+A+R+
Sbjct: 48 KSTSGSLSVDKSKESEKMLIARKNDSRTVNYKEKAPEAVKDHEIPNANRI 97
>AC024780-3|AAF60571.2| 300|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 50 protein.
Length = 300
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -3
Query: 374 KSLSLSSVYFHRVYSSKF*TAMLFWSQ*RLALYQLFLNADTFAVLIVNR 228
+SLS + FHR+ ++ F + FW++ L +Y + AV ++NR
Sbjct: 94 QSLSSICICFHRLSTALFENSNKFWNRYYLLIYAFLVIYSFLAVQLLNR 142
>Z70204-5|CAI46566.1| 379|Caenorhabditis elegans Hypothetical
protein C11G6.4b protein.
Length = 379
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/18 (55%), Positives = 16/18 (88%), Gaps = 1/18 (5%)
Frame = -2
Query: 282 FIP-VILECGYVCCTHSK 232
F+P +ILECGY+CC +++
Sbjct: 142 FLPFMILECGYMCCLNNR 159
>Z70204-4|CAA94114.2| 437|Caenorhabditis elegans Hypothetical
protein C11G6.4a protein.
Length = 437
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/18 (55%), Positives = 16/18 (88%), Gaps = 1/18 (5%)
Frame = -2
Query: 282 FIP-VILECGYVCCTHSK 232
F+P +ILECGY+CC +++
Sbjct: 200 FLPFMILECGYMCCLNNR 217
>AY305832-1|AAR11977.1| 437|Caenorhabditis elegans nuclear receptor
NHR-28 protein.
Length = 437
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/18 (55%), Positives = 16/18 (88%), Gaps = 1/18 (5%)
Frame = -2
Query: 282 FIP-VILECGYVCCTHSK 232
F+P +ILECGY+CC +++
Sbjct: 200 FLPFMILECGYMCCLNNR 217
>AY305831-1|AAR11976.1| 437|Caenorhabditis elegans nuclear receptor
NHR-28 protein.
Length = 437
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/18 (55%), Positives = 16/18 (88%), Gaps = 1/18 (5%)
Frame = -2
Query: 282 FIP-VILECGYVCCTHSK 232
F+P +ILECGY+CC +++
Sbjct: 200 FLPFMILECGYMCCLNNR 217
>AF273775-1|AAG15124.1| 383|Caenorhabditis elegans nuclear receptor
NHR-28 protein.
Length = 383
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/18 (55%), Positives = 16/18 (88%), Gaps = 1/18 (5%)
Frame = -2
Query: 282 FIP-VILECGYVCCTHSK 232
F+P +ILECGY+CC +++
Sbjct: 146 FLPFMILECGYMCCLNNR 163
>AF273774-1|AAG15123.1| 433|Caenorhabditis elegans nuclear receptor
NHR-28 protein.
Length = 433
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/18 (55%), Positives = 16/18 (88%), Gaps = 1/18 (5%)
Frame = -2
Query: 282 FIP-VILECGYVCCTHSK 232
F+P +ILECGY+CC +++
Sbjct: 196 FLPFMILECGYMCCLNNR 213
>U88182-3|ABD63240.1| 136|Caenorhabditis elegans Hypothetical
protein C53C11.5 protein.
Length = 136
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 315 SNVILVAIASCFIPVILECGYVCCTHSK 232
S +I+V + + I + + CGY CC + K
Sbjct: 74 SAIIVVVVVTISIMLCIACGYYCCCNRK 101
>AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical
protein Y52D5A.1 protein.
Length = 914
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 472 RSENCGQELDRENRLPFLTVERKNDGKTVVLTQKVFLRDRPHDLPDADRL 621
+S + +D+ + V RKND +T +K + H++P+A+R+
Sbjct: 687 KSTSGSLSVDKSKESEKMLVVRKNDSRTANYKEKAPEAVKDHEIPNANRI 736
>AY204190-1|AAO39194.1| 382|Caenorhabditis elegans nuclear receptor
NHR-106 protein.
Length = 382
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 238 MSTANVSAFKNNWYKARRYCDQNNIAVQNFEL 333
+S N+ F NN+ K R Y D +N+ + E+
Sbjct: 90 VSRPNLILFTNNYDKTRNYIDVSNLITRGLEI 121
>AF022978-5|AAG24181.2| 382|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 106 protein.
Length = 382
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 238 MSTANVSAFKNNWYKARRYCDQNNIAVQNFEL 333
+S N+ F NN+ K R Y D +N+ + E+
Sbjct: 90 VSRPNLILFTNNYDKTRNYIDVSNLITRGLEI 121
>AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical
protein Y67D8C.9 protein.
Length = 1073
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 57 LLVNEVLYQWLGVYVTPAWWSDAHINKALVNSLAVEI 167
L+ +E +QW G VT WS+ +N+ E+
Sbjct: 421 LIAHEAAHQWFGNLVTMRDWSELFLNEGFATFYVYEM 457
>U38378-2|AAR12974.1| 403|Caenorhabditis elegans Hypothetical
protein R11F4.2b protein.
Length = 403
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +2
Query: 242 VQQTYPHSRITGIKQDAIATKITLLFRTLNYTLGGNTLKKGLRTFLLEHKYKTFVGDD 415
V +++ SR G + DA+A I + GG K+ ++++ + + T GD+
Sbjct: 331 VTRSFDSSRQIGTEIDAVAIAIARRLLSSELVFGGGGTKEANDSYVISNHHATTSGDE 388
>AF125964-5|AAP13765.1| 722|Caenorhabditis elegans Hypothetical
protein W03G1.6b protein.
Length = 722
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +1
Query: 502 RENRLP---FLTVERKNDGKTVVLTQKVFLRDRPHDLPDADRL 621
+ NRLP F ++ERK + +LT + RD P L D +
Sbjct: 594 KTNRLPQRVFTSLERKKEKLITLLTPRKMQRDSPQVLKDVKNM 636
>AF125964-2|AAD14754.1| 726|Caenorhabditis elegans Hypothetical
protein W03G1.6a protein.
Length = 726
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +1
Query: 502 RENRLP---FLTVERKNDGKTVVLTQKVFLRDRPHDLPDADRL 621
+ NRLP F ++ERK + +LT + RD P L D +
Sbjct: 594 KTNRLPQRVFTSLERKKEKLITLLTPRKMQRDSPQVLKDVKNM 636
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,677,985
Number of Sequences: 27780
Number of extensions: 314056
Number of successful extensions: 892
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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