Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1982
(675 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 36 2e-04
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 3.0
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 3.0
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 3.0
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 22 4.0
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 22 4.0
AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory recept... 22 4.0
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 21 7.0
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 21 7.0
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 21 7.0
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 21 7.0
AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein. 21 9.2
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 36.3 bits (80), Expect = 2e-04
Identities = 15/50 (30%), Positives = 31/50 (62%)
Frame = +3
Query: 96 FGNLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVFN 245
F NL +LK++ ++ + I + +TF+N P + ++ LA+N + L +F+
Sbjct: 136 FMNLKSLKRLNLKGNKIATIAYETFQNLPELEDLDLAYNSISSLDFNIFD 185
Score = 33.1 bits (72), Expect = 0.002
Identities = 12/49 (24%), Positives = 29/49 (59%)
Frame = +3
Query: 96 FGNLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVF 242
FGN+P+L+ + + + + + DTF+N+ + + + N + +P ++F
Sbjct: 268 FGNMPHLQVLDLSHNSLYELDFDTFRNTKKLQWLDTSHNRISEIPNDLF 316
Score = 31.9 bits (69), Expect = 0.005
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 254 HLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
HL LDLSHN +++L TF +L+ L+ +N++
Sbjct: 273 HLQVLDLSHNSLYELDFDTFRNTKKLQWLDTSHNRI 308
Score = 30.7 bits (66), Expect = 0.011
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 257 LLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQLVFID 373
L+ L L HNK+ + F + L++L+L +N L +D
Sbjct: 250 LMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHNSLYELD 288
Score = 29.9 bits (64), Expect = 0.020
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 230 GGSVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQLVFID 373
GG + + L LDLS+N++ + TF + RL LNL +N + ++
Sbjct: 387 GGQLARFKCLSWLDLSYNRLGQIDAGTFKGIPRLASLNLGHNSQLTLE 434
Score = 28.3 bits (60), Expect = 0.061
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 526 ANNCLSLEPRSPFANTYNLKLLNLSHNAFRISFVD--WWINGHETVDVSHN 672
++N +S P F NL++++ SHN R S D + G E +DVSHN
Sbjct: 304 SHNRISEIPNDLFRFLGNLRIVDFSHNRLR-SLPDNLFRETGLERLDVSHN 353
Score = 27.1 bits (57), Expect = 0.14
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 111 NLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVFNN 248
+L Q+Y+ + + +D F N P + + L+ N L L + F N
Sbjct: 249 SLMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHNSLYELDFDTFRN 294
Score = 25.8 bits (54), Expect = 0.32
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +3
Query: 96 FGNLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVF 242
F N L+ + + I +P D F+ + + + N L+ LP+ +F
Sbjct: 292 FRNTKKLQWLDTSHNRISEIPNDLFRFLGNLRIVDFSHNRLRSLPDNLF 340
Score = 25.4 bits (53), Expect = 0.43
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 508 LEQTVYANNCLSLEPRSPFANTYNLKLLNLSHNAFRISFVDWWINGH--ETVDVSHN 672
L Q +N L + F N +L++L+LSHN+ D + N + +D SHN
Sbjct: 250 LMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHNSLYELDFDTFRNTKKLQWLDTSHN 306
Score = 24.6 bits (51), Expect = 0.75
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 257 LLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQLVFI 370
L + L N+I L R F L L+ LNL N++ I
Sbjct: 118 LEQIHLDDNRIESLERRAFMNLKSLKRLNLKGNKIATI 155
Score = 23.0 bits (47), Expect = 2.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 174 NSPAITNISLAFNDLKRLPEEVFNN 248
++P + ++SLAFN L + EV N
Sbjct: 464 STPNLLSLSLAFNSLPTVALEVAGN 488
Score = 22.6 bits (46), Expect = 3.0
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +3
Query: 108 PNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLP 230
PNL + + + + V + N ++ ++L +NDL +P
Sbjct: 466 PNLLSLSLAFNSLPTVALEVAGNISSLRYLNLDYNDLSAVP 506
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +3
Query: 129 VQRSGIEVVPRDTFKNSPAITNISLAFND 215
V+ + I +P D F+N + N+S+ D
Sbjct: 646 VRNTSIIKIPFDVFRNMLPVRNVSVDVRD 674
Score = 22.2 bits (45), Expect = 4.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 505 RLEQTVYANNCLSLEPRSPFANTYNLKLLNLSHN 606
+LEQ +N + R F N +LK LNL N
Sbjct: 117 QLEQIHLDDNRIESLERRAFMNLKSLKRLNLKGN 150
Score = 21.4 bits (43), Expect = 7.0
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 502 SRLEQTVYANNCLSLEPRSPFANTYNLKLLNLSHNAFRI 618
+RLE+ +NN L P + F +LK ++L N +
Sbjct: 42 NRLEELDLSNNRLRNVPDNSFHFLRSLKKVHLQDNTIEM 80
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.6 bits (46), Expect = 3.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 111 WANFQTNVPAVPLIRAVG 58
W NF + +P IRA+G
Sbjct: 25 WENFVSETSYLPFIRALG 42
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.6 bits (46), Expect = 3.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 111 WANFQTNVPAVPLIRAVG 58
W NF + +P IRA+G
Sbjct: 258 WENFVSETSYLPFIRALG 275
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.6 bits (46), Expect = 3.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 111 WANFQTNVPAVPLIRAVG 58
W NF + +P IRA+G
Sbjct: 258 WENFVSETSYLPFIRALG 275
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 22.2 bits (45), Expect = 4.0
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1
Query: 382 ILFFVKPYRPE 414
+LFFVK +RPE
Sbjct: 228 LLFFVKVFRPE 238
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 22.2 bits (45), Expect = 4.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 553 RSPFANTYNLKLLNLSHNAFRISFVDWWI 639
RS F ++ L L N+ +SFV +W+
Sbjct: 33 RSNFRSSKLLILYNIILQVLFVSFVSYWL 61
>AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory receptor
candidate 3 protein.
Length = 398
Score = 22.2 bits (45), Expect = 4.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 553 RSPFANTYNLKLLNLSHNAFRISFVDWWI 639
RS F ++ L L N+ +SFV +W+
Sbjct: 51 RSNFRSSKLLILYNIILQVLFVSFVSYWL 79
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +1
Query: 22 CERRSASACGRHSYRPN 72
CE SA CG H P+
Sbjct: 104 CEMPSAGLCGSHDEIPD 120
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 21.4 bits (43), Expect = 7.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 226 RRFKSLNANDMLVIAGEFLNVSRGT 152
R + +NAN + A F ++SR T
Sbjct: 311 RLAQQVNANIAQITAANFFDISRST 335
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +1
Query: 22 CERRSASACGRHSYRPN 72
CE SA CG H P+
Sbjct: 52 CEMPSAGLCGSHDEIPD 68
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +1
Query: 22 CERRSASACGRHSYRPN 72
CE SA CG H P+
Sbjct: 235 CEMPSAGLCGSHDEIPD 251
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +2
Query: 176 LTGNYQHIVSVQRFKTPPGGSVQQSDH 256
L+G+ H S+ TPP G H
Sbjct: 77 LSGDMTHGASISPQNTPPAGYPMDVPH 103
>AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein.
Length = 150
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +2
Query: 176 LTGNYQHIVSVQRFKTPPGGSVQQSDH 256
L+G+ H S+ TPP G H
Sbjct: 77 LSGDMTHGASISPQNTPPAGYPMDVPH 103
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,307
Number of Sequences: 336
Number of extensions: 2980
Number of successful extensions: 28
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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