Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1982
(675 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 37 0.015
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 37 0.015
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 37 0.015
AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein. 36 0.026
AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical ... 36 0.026
U41110-4|AAA82419.1| 575|Caenorhabditis elegans Hypothetical pr... 35 0.046
AF003132-2|AAB54134.2| 568|Caenorhabditis elegans Hypothetical ... 35 0.061
U41625-2|ABS19463.1| 584|Caenorhabditis elegans Hypothetical pr... 34 0.081
U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical pr... 34 0.081
Z79596-5|CAB01858.3| 369|Caenorhabditis elegans Hypothetical pr... 34 0.11
U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of c... 34 0.11
U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of c... 34 0.11
AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding p... 34 0.11
AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich ... 34 0.11
Z79598-1|CAB01867.3| 586|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical pr... 31 0.57
AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical ... 31 0.57
AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical ... 31 0.57
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 31 0.99
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 31 0.99
Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical pr... 30 1.3
AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein... 30 1.3
U29380-13|AAL11485.1| 227|Caenorhabditis elegans Hypothetical p... 30 1.7
U29380-12|AAR12986.1| 485|Caenorhabditis elegans Hypothetical p... 30 1.7
U29380-11|AAR12987.1| 501|Caenorhabditis elegans Hypothetical p... 30 1.7
AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical ... 30 1.7
AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical ... 30 1.7
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z77670-4|CAB01249.2| 439|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical ... 29 3.0
AF325178-1|AAG49583.1| 439|Caenorhabditis elegans CEH-32 protein. 29 3.0
AB006659-1|BAA21847.1| 655|Caenorhabditis elegans E6-AP ubiquit... 29 3.0
Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z46996-5|CAA87096.1| 268|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical p... 28 5.3
Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z75713-4|CAB00050.1| 603|Caenorhabditis elegans Hypothetical pr... 28 5.3
AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin (... 28 5.3
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 27 9.2
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 27 9.2
>Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical
protein K07A12.2 protein.
Length = 961
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +2
Query: 236 SVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
S Q HL LDL HNKI D+ TF L +L L+L NN++
Sbjct: 384 SFAQLAHLTTLDLGHNKIHDIEEGTFDKLSKLFWLDLSNNKI 425
Score = 30.7 bits (66), Expect = 0.99
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 102 NLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVFNN 248
+LPNLKQV V + I + F N+P + IS+ N++ ++ F +
Sbjct: 291 DLPNLKQVRVDGNLITKIETLAFSNNPNLQLISVQNNNIVQISRNSFES 339
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +3
Query: 96 FGNLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVFN 245
F N PNL+ + VQ + I + R++F++ + + + N L ++ +F+
Sbjct: 313 FSNNPNLQLISVQNNNIVQISRNSFESLDKLVVLLVGNNSLAKIERGMFD 362
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +2
Query: 227 PGGSVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
P + + L LDLSHN++ L TFS L RL L + N+L
Sbjct: 720 PAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKL 764
Score = 35.5 bits (78), Expect = 0.035
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +2
Query: 260 LNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQLVFIDGXXXXXXXXXXXXXXXXXXXXX 439
+ LDL N+I + FS+L+ L+ L L +NQ+V I
Sbjct: 47 IRLDLQDNEITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRH 106
Query: 440 XTSDLFRNNKQRMSISLANNNL 505
++F+NN + + L+ N++
Sbjct: 107 LPDNVFQNNLKLTHLDLSENDI 128
Score = 31.9 bits (69), Expect = 0.43
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +3
Query: 96 FGNLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVFNNQI 254
F +L NLK + + + I + +F + + + L+ N ++ LP+ VF N +
Sbjct: 64 FSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLPDNVFQNNL 116
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 96 FGNLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVFNN 248
F L +L+ + + + + + R TF + P ++ +SL ND+K + E F N
Sbjct: 355 FEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQN 405
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/41 (29%), Positives = 27/41 (65%)
Frame = +3
Query: 96 FGNLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDL 218
F +L L+++ + R+ I +P + F+N+ +T++ L+ ND+
Sbjct: 88 FSSLVFLQKLRLSRNRIRHLPDNVFQNNLKLTHLDLSENDI 128
Score = 28.3 bits (60), Expect = 5.3
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +3
Query: 96 FGNLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVFNNQIIY*I*IS 275
F NL L + + + + + F A+ +SL ND+ LP+ F+N + I+
Sbjct: 748 FSNLTRLSTLIISYNKLRCLQPLAFNGLNALRILSLHGNDISFLPQSAFSN-LTSITHIA 806
Query: 276 VTTRSLIWQRER--FQRWCDSRY 338
V + SL F +W S++
Sbjct: 807 VGSNSLYCDCNMAWFSKWIKSKF 829
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical
protein C56E6.6 protein.
Length = 1102
Score = 36.7 bits (81), Expect = 0.015
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +2
Query: 176 LTGNYQHIVSVQRFKTPPGGSVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNN 355
L GN I++ F GS S+ L +L+L+HNKI +++R+FS L L+ L L +N
Sbjct: 421 LAGNQLDIITENMF-----GSSSSSE-LKSLNLAHNKIHSISSRSFSDLDNLQQLRLSHN 474
Query: 356 QL 361
+
Sbjct: 475 NI 476
Score = 35.1 bits (77), Expect = 0.046
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 236 SVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQLVFI 370
S D+L L LSHN I + + TFS L L L+L +N+++ I
Sbjct: 459 SFSDLDNLQQLRLSHNNIRTITSMTFSNLRNLRYLDLSHNRIIKI 503
Score = 31.5 bits (68), Expect = 0.57
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +2
Query: 155 ATRHVQELTGNYQHIVSVQRFKTPPGGSVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLE 334
++R +L Q +S +T + +L LDLSHN+I + L L+
Sbjct: 456 SSRSFSDLDNLQQLRLSHNNIRTITSMTFSNLRNLRYLDLSHNRIIKILPSALYQLPALD 515
Query: 335 ILNLCNNQLVFID 373
+L+L +N L ID
Sbjct: 516 VLHLDHNNLNEID 528
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 257 LLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
L LDLSHN + + T + L L+IL+L NN++
Sbjct: 3 LTQLDLSHNNLSVIPTWALTYLHSLQILHLENNRI 37
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 257 LLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
L +D+S N+I ++ R F L LE L L NNQL
Sbjct: 346 LTYVDVSFNRIRFISPRVFEKLKNLESLFLQNNQL 380
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 266 LDLSHNKIFDLATRTFSTLVRLEILNLCNNQLVFI 370
LD+SHN + +++ F L+ L+ LN+ N + +
Sbjct: 825 LDISHNNLKQISSMAFEPLIHLKQLNVSANPITHL 859
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 125 LRSTKRYRGRATRHVQELTGNYQHIVSVQRFKTPPGGSVQQSDHLLNLDLSHNKIFDLAT 304
+R ++ R+ R ++EL +Y I +V+ S + H+ +LDLS+N+I L
Sbjct: 156 VRRLDKHSFRSFRKIRELDISYNQIQTVE------DSSFETVGHMQSLDLSYNRIAYLPR 209
Query: 305 RTFSTLVR-LEILNLCNNQL 361
+ L+ L L N +
Sbjct: 210 GMLKNFAKTLKTLKLAENMI 229
Score = 28.3 bits (60), Expect = 5.3
Identities = 22/106 (20%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Frame = +2
Query: 266 LDLSHNKIFDLATRTFSTLVRLEILNLCNNQLVFIDGXXXXXXXXXXXXXXXXXXXXXXT 445
LD+S+N+I + +F T+ ++ L+L N++ ++ T
Sbjct: 173 LDISYNQIQTVEDSSFETVGHMQSLDLSYNRIAYLPRGMLKNFAKTLKTLKLAENMIHAT 232
Query: 446 SDLFRNNKQRMSISLANNNL-----DSSRQCTRTTVCLWNRDRHLQ 568
+ R+ + ++L N L D + CT T V L+ + +L+
Sbjct: 233 PEALRDLRNLTHLNLNGNKLNRIDGDVLKGCTDTLVELFIANNYLE 278
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 239 VQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
+Q + L ++D+SHN I D+ + F +L + L +N +
Sbjct: 602 LQDATELTSIDISHNGIIDVDSDAFCECRKLSHIKLSHNYI 642
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +2
Query: 227 PGGSVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
P + + L LDLSHN++ L TFS L RL L + N+L
Sbjct: 720 PAHDLNRLYSLTKLDLSHNRLISLENNTFSNLTRLSTLIISYNKL 764
Score = 35.5 bits (78), Expect = 0.035
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +2
Query: 260 LNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQLVFIDGXXXXXXXXXXXXXXXXXXXXX 439
+ LDL N+I + FS+L+ L+ L L +NQ+V I
Sbjct: 47 IRLDLQDNEITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRH 106
Query: 440 XTSDLFRNNKQRMSISLANNNL 505
++F+NN + + L+ N++
Sbjct: 107 LPDNVFQNNLKLTHLDLSENDI 128
Score = 31.9 bits (69), Expect = 0.43
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +3
Query: 96 FGNLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVFNNQI 254
F +L NLK + + + I + +F + + + L+ N ++ LP+ VF N +
Sbjct: 64 FSSLMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLPDNVFQNNL 116
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 96 FGNLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVFNN 248
F L +L+ + + + + + R TF + P ++ +SL ND+K + E F N
Sbjct: 355 FEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQN 405
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/41 (29%), Positives = 27/41 (65%)
Frame = +3
Query: 96 FGNLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDL 218
F +L L+++ + R+ I +P + F+N+ +T++ L+ ND+
Sbjct: 88 FSSLVFLQKLRLSRNRIRHLPDNVFQNNLKLTHLDLSENDI 128
Score = 28.3 bits (60), Expect = 5.3
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +3
Query: 96 FGNLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVFNNQIIY*I*IS 275
F NL L + + + + + F A+ +SL ND+ LP+ F+N + I+
Sbjct: 748 FSNLTRLSTLIISYNKLRCLQPLAFNGLNALRILSLHGNDISFLPQSAFSN-LTSITHIA 806
Query: 276 VTTRSLIWQRER--FQRWCDSRY 338
V + SL F +W S++
Sbjct: 807 VGSNSLYCDCNMAWFSKWIKSKF 829
>AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein.
Length = 542
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 108 PNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVFN 245
PNL+Q+ + + I + D F P++ + L+ N L LP EVF+
Sbjct: 70 PNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLPNEVFS 115
Score = 35.5 bits (78), Expect = 0.035
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +2
Query: 233 GSVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQLVFIDG 376
G L +LD+S N I D+ L +LE LNL NNQLV + G
Sbjct: 207 GMFLSQKELKHLDVSENLIGDIEEGALYGLEKLETLNLTNNQLVRLPG 254
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +2
Query: 200 VSVQRFKTPPGGSVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
++ R P ++ L NLDLS NK+ + + L LE L L N L
Sbjct: 148 IADNRLSFLPPSVLKPLSGLRNLDLSANKLLSMPASVMNNLGGLETLKLKQNLL 201
>AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical
protein Y71F9B.8 protein.
Length = 542
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 108 PNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVFN 245
PNL+Q+ + + I + D F P++ + L+ N L LP EVF+
Sbjct: 70 PNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLPNEVFS 115
Score = 35.5 bits (78), Expect = 0.035
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +2
Query: 233 GSVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQLVFIDG 376
G L +LD+S N I D+ L +LE LNL NNQLV + G
Sbjct: 207 GMFLSQKELKHLDVSENLIGDIEEGALYGLEKLETLNLTNNQLVRLPG 254
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +2
Query: 200 VSVQRFKTPPGGSVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
++ R P ++ L NLDLS NK+ + + L LE L L N L
Sbjct: 148 IADNRLSFLPPSVLKPLSGLRNLDLSANKLLSMPASVMNNLGGLETLKLKQNLL 201
>U41110-4|AAA82419.1| 575|Caenorhabditis elegans Hypothetical
protein ZK682.5 protein.
Length = 575
Score = 35.1 bits (77), Expect = 0.046
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +3
Query: 96 FGNLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVFNNQII 257
F L +L + +Q + I+ V F N PAI+++ +++N L+ +P VF N +
Sbjct: 350 FEGLNDLYSIDLQGNRIDNVQPLGFANLPAISHLDISYNLLQTMPSNVFQNSFL 403
>AF003132-2|AAB54134.2| 568|Caenorhabditis elegans Hypothetical
protein F37E3.2 protein.
Length = 568
Score = 34.7 bits (76), Expect = 0.061
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 248 SDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
S L+++DLS+N+I A+ TFS + L +L+L N +
Sbjct: 238 SPFLIHVDLSYNQITSFASHTFSKCIDLRVLDLTGNPI 275
>U41625-2|ABS19463.1| 584|Caenorhabditis elegans Hypothetical
protein K03A1.2b protein.
Length = 584
Score = 34.3 bits (75), Expect = 0.081
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +3
Query: 96 FGNLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVFNNQIIY*I*IS 275
F L +L+++ + IE +P D F+ P + +SL N L+ +P V + + + I +S
Sbjct: 297 FKGLDSLEELSLDNCNIENLPADIFEYLPKLVKLSLRENPLEEIPAVVAHLKSLKDIDLS 356
Query: 276 VT 281
VT
Sbjct: 357 VT 358
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 257 LLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
L LDL +N+I ++ +F TL +L++L+L N +
Sbjct: 255 LHRLDLGYNRIKVVSDNSFDTLSKLKVLSLDGNPI 289
>U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical
protein K03A1.2a protein.
Length = 586
Score = 34.3 bits (75), Expect = 0.081
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +3
Query: 96 FGNLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVFNNQIIY*I*IS 275
F L +L+++ + IE +P D F+ P + +SL N L+ +P V + + + I +S
Sbjct: 297 FKGLDSLEELSLDNCNIENLPADIFEYLPKLVKLSLRENPLEEIPAVVAHLKSLKDIDLS 356
Query: 276 VT 281
VT
Sbjct: 357 VT 358
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 257 LLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
L LDL +N+I ++ +F TL +L++L+L N +
Sbjct: 255 LHRLDLGYNRIKVVSDNSFDTLSKLKVLSLDGNPI 289
>Z79596-5|CAB01858.3| 369|Caenorhabditis elegans Hypothetical
protein C02C6.3a protein.
Length = 369
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Frame = +2
Query: 173 ELTGNYQHIVSV----QRFK----TPPGGSVQQSDHLLNLDLSHNKIFDLATRTFSTLVR 328
++ NY++I SV F+ TP G+ Q+ L+ L+LS N I +L + +
Sbjct: 89 DIATNYKYIKSVTFHGNNFQDLTSTPLFGADSQTS-LIKLNLSANYIVNLNSNALRNMPN 147
Query: 329 LEILNLCNNQLVF 367
L++L++ NN++VF
Sbjct: 148 LQVLDISNNEIVF 160
>U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of clr
protein 2, isoforma protein.
Length = 559
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 194 HIVSVQRFKTP--PGGSVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQLV 364
H V++ R + P G QQ + +++ HN+I + FS RL LNL N+LV
Sbjct: 307 HTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELV 365
>U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of clr
protein 2, isoformb protein.
Length = 558
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 194 HIVSVQRFKTP--PGGSVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQLV 364
H V++ R + P G QQ + +++ HN+I + FS RL LNL N+LV
Sbjct: 306 HTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELV 364
>AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding
protein SUR-8 protein.
Length = 559
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 194 HIVSVQRFKTP--PGGSVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQLV 364
H V++ R + P G QQ + +++ HN+I + FS RL LNL N+LV
Sbjct: 307 HTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELV 365
>AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich
repeat protein SOC-2 protein.
Length = 559
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 194 HIVSVQRFKTP--PGGSVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQLV 364
H V++ R + P G QQ + +++ HN+I + FS RL LNL N+LV
Sbjct: 307 HTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELV 365
>Z79598-1|CAB01867.3| 586|Caenorhabditis elegans Hypothetical
protein C44H4.1 protein.
Length = 586
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 105 LPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVF 242
LPNLK + ++ + I ++P D+F +P ++ + L N L + +F
Sbjct: 229 LPNLKSLSLEVNQIRLIPSDSFSETPLLSYLYLGNNLLTSIDASMF 274
>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical
protein F43C1.1 protein.
Length = 1036
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 254 HLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
HL +DLSHN++ S+L LE LNL +N+L
Sbjct: 535 HLKIIDLSHNRLNSFDDSALSSLELLEDLNLSSNRL 570
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +2
Query: 254 HLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
HL L+LS N I + + S + RL+ LNL NNQL
Sbjct: 221 HLRQLNLSSNYISSVPSEC-SNMRRLQYLNLSNNQL 255
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +1
Query: 481 YFVGKQ*SRLEQTVYANNCLSLEPRSPFANTYNLKLLNLSHNAFRISFVDWWINGHETVD 660
YF G RL+ ANN L+ N +LK+++LSHN SF D ++ E ++
Sbjct: 503 YFDGSSFCRLQILRCANNYLTENSVPVIVNMKHLKIIDLSHNRLN-SFDDSALSSLELLE 561
>Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical
protein C44H4.2 protein.
Length = 738
Score = 31.5 bits (68), Expect = 0.57
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +2
Query: 176 LTGNYQHIVSVQRFKTPPGGSVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNN 355
L GN H ++ Q F P L L LS NKI L F T +LE+L+L NN
Sbjct: 204 LAGNQIHELNRQAFLNVPS--------LRYLYLSGNKITKLTAYQFQTFEQLEMLDLTNN 255
Query: 356 QL 361
++
Sbjct: 256 EI 257
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 227 PGGSVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
P +++ L +L L N+I L F L L +LNL NQ+
Sbjct: 165 PSSAIRGLKQLQSLHLHKNRIEQLDALNFLNLPVLNLLNLAGNQI 209
>AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical
protein T21D12.9c protein.
Length = 737
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 96 FGNLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVF 242
F L L+ + + R+ I V F P++ N+SLA ND+ RL + +F
Sbjct: 215 FSRLRKLESLDLTRNMIREVRFLAFNQLPSLQNVSLARNDVYRLDDGMF 263
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = +3
Query: 102 NLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVF 242
++P L+ + + + V+P+ F+ PA+ + L N + + E F
Sbjct: 389 SMPFLRSLRFTNNQLRVIPKRAFERFPALEELDLTDNPIATIHPEAF 435
>AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical
protein T21D12.9a protein.
Length = 881
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 96 FGNLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVF 242
F L L+ + + R+ I V F P++ N+SLA ND+ RL + +F
Sbjct: 215 FSRLRKLESLDLTRNMIREVRFLAFNQLPSLQNVSLARNDVYRLDDGMF 263
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = +3
Query: 102 NLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVF 242
++P L+ + + + V+P+ F+ PA+ + L N + + E F
Sbjct: 389 SMPFLRSLRFTNNQLRVIPKRAFERFPALEELDLTDNPIATIHPEAF 435
>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like
receptor TOL-1 protein.
Length = 1221
Score = 30.7 bits (66), Expect = 0.99
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 532 NCLSLEPRSPFANTYNLKLLNLSHNAFRISFVDWWINGHETVDVSHN 672
N L+ SP +T NLK ++LS+N I D N E++DVS+N
Sbjct: 554 NLLTAASMSP--STANLKSVSLSNNGITIMNADQIPNSLESLDVSNN 598
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 236 SVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
++ + + L +DLSHN+I + + + +L ++L NNQL
Sbjct: 419 AIGKVEQLKKVDLSHNRIAKVYQYVLNKIKQLHTVDLSNNQL 460
>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll
(drosophila) family protein 1 protein.
Length = 1221
Score = 30.7 bits (66), Expect = 0.99
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 532 NCLSLEPRSPFANTYNLKLLNLSHNAFRISFVDWWINGHETVDVSHN 672
N L+ SP +T NLK ++LS+N I D N E++DVS+N
Sbjct: 554 NLLTAASMSP--STANLKSVSLSNNGITIMNADQIPNSLESLDVSNN 598
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 236 SVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
++ + + L +DLSHN+I + + + +L ++L NNQL
Sbjct: 419 AIGKVEQLKKVDLSHNRIAKVYQYVLNKIKQLHTVDLSNNQL 460
>Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical
protein C44H4.3 protein.
Length = 680
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 179 TGNYQHI-VSVQRFKTPPGGSVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNN 355
T N ++ ++ +T G ++Q L LDLS N D+ F L ++ LNL +N
Sbjct: 252 TPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMFEGLESIQHLNLDSN 311
Query: 356 QL 361
++
Sbjct: 312 RI 313
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/47 (21%), Positives = 24/47 (51%)
Frame = +3
Query: 102 NLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVF 242
N PNL +Y+ + ++ + + + + L+FN+ + +E+F
Sbjct: 251 NTPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMF 297
>AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein
protein.
Length = 680
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 179 TGNYQHI-VSVQRFKTPPGGSVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNN 355
T N ++ ++ +T G ++Q L LDLS N D+ F L ++ LNL +N
Sbjct: 252 TPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMFEGLESIQHLNLDSN 311
Query: 356 QL 361
++
Sbjct: 312 RI 313
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/47 (21%), Positives = 24/47 (51%)
Frame = +3
Query: 102 NLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVF 242
N PNL +Y+ + ++ + + + + L+FN+ + +E+F
Sbjct: 251 NTPNLHYLYLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMF 297
>U29380-13|AAL11485.1| 227|Caenorhabditis elegans Hypothetical
protein ZK546.2b protein.
Length = 227
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 454 VSEQQTEDV-YFVGKQ*SRLEQTVYANNCLSLEPRSPFANTYNLKLLNLSHNAFR 615
+SE + ++ F+G Q S+L+Q ANNCL P + L++LNL+ N +
Sbjct: 34 LSENKIREIPIFIG-QFSQLKQLHLANNCLEFLP-DELGSMKKLEILNLAGNKLK 86
>U29380-12|AAR12986.1| 485|Caenorhabditis elegans Hypothetical
protein ZK546.2a protein.
Length = 485
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 454 VSEQQTEDV-YFVGKQ*SRLEQTVYANNCLSLEPRSPFANTYNLKLLNLSHNAFR 615
+SE + ++ F+G Q S+L+Q ANNCL P + L++LNL+ N +
Sbjct: 292 LSENKIREIPIFIG-QFSQLKQLHLANNCLEFLP-DELGSMKKLEILNLAGNKLK 344
>U29380-11|AAR12987.1| 501|Caenorhabditis elegans Hypothetical
protein ZK546.2c protein.
Length = 501
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 454 VSEQQTEDV-YFVGKQ*SRLEQTVYANNCLSLEPRSPFANTYNLKLLNLSHNAFR 615
+SE + ++ F+G Q S+L+Q ANNCL P + L++LNL+ N +
Sbjct: 308 LSENKIREIPIFIG-QFSQLKQLHLANNCLEFLP-DELGSMKKLEILNLAGNKLK 360
>AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical
protein T22E7.1b protein.
Length = 310
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 254 HLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQLVFID 373
HL ++L+ NKI + +TF + L+ L L NN++ D
Sbjct: 155 HLAQIELNKNKIEGIYPKTFCGIQGLQRLELSNNRIPSFD 194
>AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical
protein T22E7.1a protein.
Length = 341
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 254 HLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQLVFID 373
HL ++L+ NKI + +TF + L+ L L NN++ D
Sbjct: 155 HLAQIELNKNKIEGIYPKTFCGIQGLQRLELSNNRIPSFD 194
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 22 CERRSASACGRHSYRPN*GYCRNVCLEIC 108
C++ + C +H+ P+ C+NVC+E+C
Sbjct: 543 CQQTCQTGCQQHN--PDARVCQNVCVEVC 569
>Z77670-4|CAB01249.2| 439|Caenorhabditis elegans Hypothetical
protein W05E10.3 protein.
Length = 439
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/71 (22%), Positives = 38/71 (53%)
Frame = -1
Query: 498 LFANEIDILCLLFRNKSDVIIFKLLFSIFRSIRLNKEENSDPSINTS*LLHKFNISSRTN 319
+FA + L +L N + + F F+ R+ ++++EENS+ ++ + S+ +
Sbjct: 309 MFAAAANPLMMLNLNPALYMQFHNFFNTMRNPQIDEEENSETTVEVEADIEPPKKRSKLS 368
Query: 318 VENVLVAKSKI 286
++ +L KS++
Sbjct: 369 IDEILNIKSEV 379
>AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical
protein Y39A1C.2 protein.
Length = 1066
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = -3
Query: 190 VIAGEFLNVSRGTTSIPLR*T*TCFKLGKFPNKRSGSTLNSGGRSGVHKPT 38
V+ G FL + +GT + L TCF L K PN S L R +H T
Sbjct: 1012 VVRG-FLALRKGTAATRLPTASTCFNLLKLPNYNKKSLLLEKLRYAIHAGT 1061
>AF325178-1|AAG49583.1| 439|Caenorhabditis elegans CEH-32 protein.
Length = 439
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/71 (22%), Positives = 38/71 (53%)
Frame = -1
Query: 498 LFANEIDILCLLFRNKSDVIIFKLLFSIFRSIRLNKEENSDPSINTS*LLHKFNISSRTN 319
+FA + L +L N + + F F+ R+ ++++EENS+ ++ + S+ +
Sbjct: 309 MFAAAANPLMMLNLNPALYMQFHNFFNTMRNPQIDEEENSETTVEVEADIEPPKKRSKLS 368
Query: 318 VENVLVAKSKI 286
++ +L KS++
Sbjct: 369 IDEILNIKSEV 379
>AB006659-1|BAA21847.1| 655|Caenorhabditis elegans E6-AP
ubiquitin-protein ligase protein.
Length = 655
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = -3
Query: 190 VIAGEFLNVSRGTTSIPLR*T*TCFKLGKFPNKRSGSTLNSGGRSGVHKPT 38
V+ G FL + +GT + L TCF L K PN S L R +H T
Sbjct: 601 VVRG-FLALRKGTAATRLPTASTCFNLLKLPNYNKKSLLLEKLRYAIHAGT 650
>Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical
protein T05A1.3 protein.
Length = 747
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 257 LLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
L ++DLS+NK+ L F L L +L+L NN L
Sbjct: 263 LKHVDLSNNKLTYLHDHAFEHLTNLILLDLKNNSL 297
>Z46996-5|CAA87096.1| 268|Caenorhabditis elegans Hypothetical
protein C34C12.5 protein.
Length = 268
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 257 LLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
+ L LSHNK+ + + LV L+ LNL NNQ+
Sbjct: 35 ITRLTLSHNKLTSVPPN-IADLVSLQSLNLWNNQI 68
>Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical
protein T23G11.6a protein.
Length = 653
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 96 FGNLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVF 242
F L LK++ ++ + IE + F ++T +SLA N + +L +VF
Sbjct: 276 FATLKKLKELDLRVNLIENITAYAFDGLESLTRLSLAGNFISKLEPDVF 324
>Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical
protein T23G11.6b protein.
Length = 616
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 96 FGNLPNLKQVYVQRSGIEVVPRDTFKNSPAITNISLAFNDLKRLPEEVF 242
F L LK++ ++ + IE + F ++T +SLA N + +L +VF
Sbjct: 276 FATLKKLKELDLRVNLIENITAYAFDGLESLTRLSLAGNFISKLEPDVF 324
>Z75713-4|CAB00050.1| 603|Caenorhabditis elegans Hypothetical
protein T01G9.3 protein.
Length = 603
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/68 (25%), Positives = 30/68 (44%)
Frame = +2
Query: 173 ELTGNYQHIVSVQRFKTPPGGSVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCN 352
+L Y H++S+ G + +N L + K FD+ F T ++ L N
Sbjct: 374 QLPSRYYHLISLNI----SGNELTYLPDNINTLLPNVKTFDITANRFHTFSHTDLAFLNN 429
Query: 353 NQLVFIDG 376
+ V++DG
Sbjct: 430 VEQVYVDG 437
>AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin
(drosophila peroxidase)homolog protein 1 protein.
Length = 1285
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 251 DHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQLVFI 370
+ L L L+HNKI + L L+ L+L +N+LV+I
Sbjct: 76 NQLETLVLTHNKIKIIEENVLDHLPELKRLSLAHNELVYI 115
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 257 LLNLDLSHNKIFDLATRTFSTLVRLEILNLCNN 355
L LD SHN+I L T+ F L L +L +N
Sbjct: 149 LTQLDFSHNRIQSLRTKLFDNLPALSHAHLHSN 181
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 200 VSVQRFKTPPGGSVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
+S +T P LL LDLS+NK+ D+ L L+ L L NN L
Sbjct: 133 LSYNNIETIPNSVCANLIDLLFLDLSNNKL-DMLPPQIRRLSMLQSLKLSNNPL 185
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 200 VSVQRFKTPPGGSVQQSDHLLNLDLSHNKIFDLATRTFSTLVRLEILNLCNNQL 361
+S +T P LL LDLS+NK+ D+ L L+ L L NN L
Sbjct: 133 LSYNNIETIPNSVCANLIDLLFLDLSNNKL-DMLPPQIRRLSMLQSLKLSNNPL 185
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,492,649
Number of Sequences: 27780
Number of extensions: 292237
Number of successful extensions: 961
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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