Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1981
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 110 1e-24
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 110 1e-24
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 55 7e-08
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 55 7e-08
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 55 7e-08
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 54 1e-07
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 47 2e-05
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 47 2e-05
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 46 3e-05
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 46 3e-05
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 46 3e-05
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 39 0.004
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 39 0.004
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 31 1.2
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 31 1.2
Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 30 2.2
U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical pr... 28 8.8
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 110 bits (264), Expect = 1e-24
Identities = 51/67 (76%), Positives = 60/67 (89%)
Frame = +2
Query: 53 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 232
M++I LNPKAE AR A AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKDG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDG 60
Query: 233 NVLLHEM 253
NVLLHEM
Sbjct: 61 NVLLHEM 67
Score = 83.8 bits (198), Expect = 1e-16
Identities = 43/84 (51%), Positives = 54/84 (64%)
Frame = +1
Query: 253 AIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIAR 432
AIQHPTAS+IA+ VLLIGELLKQA+ + EGLHPRI+TEGF+ A
Sbjct: 68 AIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWAN 127
Query: 433 NKSLEVLESMKIPIEIARENLVDV 504
K+LE+LE K + R+ LV+V
Sbjct: 128 TKTLELLEKFKKEAPVERDLLVEV 151
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 110 bits (264), Expect = 1e-24
Identities = 51/67 (76%), Positives = 60/67 (89%)
Frame = +2
Query: 53 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 232
M++I LNPKAE AR A AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKDG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDG 60
Query: 233 NVLLHEM 253
NVLLHEM
Sbjct: 61 NVLLHEM 67
Score = 83.8 bits (198), Expect = 1e-16
Identities = 43/84 (51%), Positives = 54/84 (64%)
Frame = +1
Query: 253 AIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIAR 432
AIQHPTAS+IA+ VLLIGELLKQA+ + EGLHPRI+TEGF+ A
Sbjct: 68 AIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWAN 127
Query: 433 NKSLEVLESMKIPIEIARENLVDV 504
K+LE+LE K + R+ LV+V
Sbjct: 128 TKTLELLEKFKKEAPVERDLLVEV 151
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 54.8 bits (126), Expect = 7e-08
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 IQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARN 435
+QH A L+ V+L G LL++A+ I G+HP I +GFD+A
Sbjct: 84 VQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACK 143
Query: 436 KSLEVLESM--KIPIEIARENLVDVA 507
K+LE L+S+ K P+E RE LV+ A
Sbjct: 144 KALETLDSISDKFPVE-NRERLVETA 168
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/50 (42%), Positives = 35/50 (70%)
Frame = +2
Query: 104 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEM 253
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKM 82
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 54.8 bits (126), Expect = 7e-08
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 IQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARN 435
+QH A L+ V+L G LL++A+ I G+HP I +GFD+A
Sbjct: 84 VQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACK 143
Query: 436 KSLEVLESM--KIPIEIARENLVDVA 507
K+LE L+S+ K P+E RE LV+ A
Sbjct: 144 KALETLDSISDKFPVE-NRERLVETA 168
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/50 (42%), Positives = 35/50 (70%)
Frame = +2
Query: 104 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEM 253
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKM 82
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 54.8 bits (126), Expect = 7e-08
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 IQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARN 435
+QH A L+ V+L G LL++A+ I G+HP I +GFD+A
Sbjct: 84 VQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACK 143
Query: 436 KSLEVLESM--KIPIEIARENLVDVA 507
K+LE L+S+ K P+E RE LV+ A
Sbjct: 144 KALETLDSISDKFPVE-NRERLVETA 168
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/50 (42%), Positives = 35/50 (70%)
Frame = +2
Query: 104 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEM 253
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKM 82
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/45 (51%), Positives = 33/45 (73%)
Frame = +2
Query: 119 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEM 253
NI AAK + D ++T+LGP+G KM+ SG GD+ IT DG +L++M
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQM 80
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/83 (25%), Positives = 43/83 (51%)
Frame = +1
Query: 253 AIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIAR 432
++ HPTA ++ V++ G LL A +S+G+HP I+E F A
Sbjct: 81 SVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAA 140
Query: 433 NKSLEVLESMKIPIEIARENLVD 501
++ ++L+ M P++++ + L++
Sbjct: 141 AEAEKILDEMSSPVDLSNDALLN 163
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/45 (51%), Positives = 33/45 (73%)
Frame = +2
Query: 119 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEM 253
NI AAK + D ++T+LGP+G KM+ SG GD+ IT DG +L++M
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQM 80
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/83 (25%), Positives = 43/83 (51%)
Frame = +1
Query: 253 AIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIAR 432
++ HPTA ++ V++ G LL A +S+G+HP I+E F A
Sbjct: 81 SVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAA 140
Query: 433 NKSLEVLESMKIPIEIARENLVD 501
++ ++L+ M P++++ + L++
Sbjct: 141 AEAEKILDEMSSPVDLSNDALLN 163
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = +2
Query: 119 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEM 253
NI+A K I DV++T+LGP+ +KML+ G I +T DGN +L E+
Sbjct: 28 NINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREI 72
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/46 (41%), Positives = 32/46 (69%)
Frame = +2
Query: 119 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQ 256
N++AA I +++K++LGP G KMLV GD+ +T DG +L +++
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLE 70
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/86 (22%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 IQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARN 435
++HP ++ V++ ELLK+AD + + +HP I G+ +A
Sbjct: 71 VEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACK 130
Query: 436 KSLE-VLESMKIPIE-IARENLVDVA 507
++++ + E++ + I R+++V+ A
Sbjct: 131 EAVKYISENISFTSDSIGRQSVVNAA 156
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/46 (41%), Positives = 32/46 (69%)
Frame = +2
Query: 119 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQ 256
N++AA I +++K++LGP G KMLV GD+ +T DG +L +++
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLE 70
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/86 (22%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 IQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARN 435
++HP ++ V++ ELLK+AD + + +HP I G+ +A
Sbjct: 71 VEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACK 130
Query: 436 KSLE-VLESMKIPIE-IARENLVDVA 507
++++ + E++ + I R+++V+ A
Sbjct: 131 EAVKYISENISFTSDSIGRQSVVNAA 156
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +2
Query: 53 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 220
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 221 TKDGNVLL 244
T DG +L
Sbjct: 61 TNDGATIL 68
Score = 32.3 bits (70), Expect = 0.41
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +1
Query: 340 LLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPI-EIARENLVDVA--L 510
+L ELLK+A+ +++ +HP+ I G+ A + E L+ I + R++L+ +A
Sbjct: 101 VLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTT 160
Query: 511 LHSKLRCIHYINY*LLSV 564
L SK+ H ++ L+V
Sbjct: 161 LGSKILSQHKEHFAQLAV 178
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +2
Query: 53 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 220
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 221 TKDGNVLL 244
T DG +L
Sbjct: 61 TNDGATIL 68
Score = 32.3 bits (70), Expect = 0.41
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +1
Query: 340 LLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPI-EIARENLVDVA--L 510
+L ELLK+A+ +++ +HP+ I G+ A + E L+ I + R++L+ +A
Sbjct: 101 VLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTT 160
Query: 511 LHSKLRCIHYINY*LLSV 564
L SK+ H ++ L+V
Sbjct: 161 LGSKILSQHKEHFAQLAV 178
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +2
Query: 53 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 220
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 221 TKDGNVLL 244
T DG +L
Sbjct: 61 TNDGATIL 68
Score = 32.3 bits (70), Expect = 0.41
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +1
Query: 340 LLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPI-EIARENLVDVA--L 510
+L ELLK+A+ +++ +HP+ I G+ A + E L+ I + R++L+ +A
Sbjct: 101 VLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTT 160
Query: 511 LHSKLRCIHYINY*LLSV 564
L SK+ H ++ L+V
Sbjct: 161 LGSKILSQHKEHFAQLAV 178
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +2
Query: 62 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 241
I LL E + + NI+A + + D ++T LGP+G K++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 242 L 244
L
Sbjct: 66 L 66
Score = 36.7 bits (81), Expect = 0.019
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Frame = +1
Query: 337 VLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE---IARENLVDVA 507
V+L E+LKQ FI +G+HP+++ A K+L+ L ++I I RE LV A
Sbjct: 98 VVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEIKINGETELREMLVKCA 157
Query: 508 --LLHSKL 525
L SKL
Sbjct: 158 ATTLSSKL 165
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +2
Query: 62 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 241
I LL E + + NI+A + + D ++T LGP+G K++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 242 L 244
L
Sbjct: 66 L 66
Score = 36.7 bits (81), Expect = 0.019
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Frame = +1
Query: 337 VLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE---IARENLVDVA 507
V+L E+LKQ FI +G+HP+++ A K+L+ L ++I I RE LV A
Sbjct: 98 VVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEIKINGETELREMLVKCA 157
Query: 508 --LLHSKL 525
L SKL
Sbjct: 158 ATTLSSKL 165
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 92 ARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 232
A QA+ V ++ + D + +GPKG ++ G KITKDG
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDG 68
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 92 ARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 232
A QA+ V ++ + D + +GPKG ++ G KITKDG
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDG 68
>Z50795-6|CAD59152.2| 707|Caenorhabditis elegans Hypothetical
protein R166.5b protein.
Length = 707
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -2
Query: 491 FSRAISIGIFIDSKTSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPMRR 339
F R S+GI I+ S + +S+ S PS++N+S L+ SP++R
Sbjct: 575 FPRKKSVGIAIEKSRSGEFTPPISRASPTTP--PPSMLNLSEDLTDSPVKR 623
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -2
Query: 491 FSRAISIGIFIDSKTSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPMRR 339
F R S+GI I+ S + +S+ S PS++N+S L+ SP++R
Sbjct: 573 FPRKKSVGIAIEKSRSGEFTPPISRASPTTP--PPSMLNLSEDLTDSPVKR 621
>U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical
protein ZK682.2 protein.
Length = 506
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 463 KIPIEIARENLVDVALLHSKLR 528
K PIE+ARE L+D + L LR
Sbjct: 480 KAPIEVAREELIDSSKLDDSLR 501
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,008,091
Number of Sequences: 27780
Number of extensions: 305883
Number of successful extensions: 611
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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