Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1980
         (790 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X87342-1|CAA60780.1| 1015|Homo sapiens Human giant larvae homolo...    30   8.3  
BC064994-1|AAH64994.1| 1020|Homo sapiens lethal giant larvae hom...    30   8.3  
BC031842-1|AAH31842.1|  271|Homo sapiens LLGL2 protein protein.        30   8.3  

>X87342-1|CAA60780.1| 1015|Homo sapiens Human giant larvae homologue
           protein.
          Length = 1015

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +2

Query: 341 LPN*LILIPLHRQNINGGRKRKCRNLHFGLNDFVSYCITHMALVQN-WDFQVTTIPLL 511
           LP     + L    + G R R+    HFG      Y   H+A++ N  D QV ++PLL
Sbjct: 824 LPKVSAKLKLKLTALEGSRVRRVSVAHFGSRRAEDYGEHHLAVLTNLGDIQVVSLPLL 881


>BC064994-1|AAH64994.1| 1020|Homo sapiens lethal giant larvae
           homolog 2 (Drosophila) protein.
          Length = 1020

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +2

Query: 341 LPN*LILIPLHRQNINGGRKRKCRNLHFGLNDFVSYCITHMALVQN-WDFQVTTIPLL 511
           LP     + L    + G R R+    HFG      Y   H+A++ N  D QV ++PLL
Sbjct: 824 LPKVSAKLKLKLTALEGSRVRRVSVAHFGSRRAEDYGEHHLAVLTNLGDIQVVSLPLL 881


>BC031842-1|AAH31842.1|  271|Homo sapiens LLGL2 protein protein.
          Length = 271

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +2

Query: 341 LPN*LILIPLHRQNINGGRKRKCRNLHFGLNDFVSYCITHMALVQN-WDFQVTTIPLL 511
           LP     + L    + G R R+    HFG      Y   H+A++ N  D QV ++PLL
Sbjct: 76  LPKVSAKLKLKLTALEGSRVRRVSVAHFGSRRAEDYGEHHLAVLTNLGDIQVVSLPLL 133


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,830,156
Number of Sequences: 237096
Number of extensions: 1974831
Number of successful extensions: 2616
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2616
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)