Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1980
         (790 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.4  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          23   2.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.9  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = -3

Query: 128 RRAVFCNNYKQILDYY-KSIDLLNSYRLQSI-FLVVQI-NVTLQK 3
           R  VF + YK ILDYY K  + L  Y  + + F  V I +VT+ K
Sbjct: 413 RDPVFFSIYKTILDYYHKYKENLPKYTTEELNFPGVSIESVTVDK 457


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = -3

Query: 128 RRAVFCNNYKQILDYY-KSIDLLNSYRLQSI-FLVVQI-NVTLQK 3
           R  VF + YK ILDYY K  + L  Y  + + F  V I +VT+ K
Sbjct: 413 RDPVFFSIYKTILDYYHKYKENLPKYTTEELNFPGVSIESVTVDK 457


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = -3

Query: 128 RRAVFCNNYKQILDYY-KSIDLLNSYRLQSI-FLVVQI-NVTLQK 3
           R  VF + YK ILDYY K  + L  Y  + + F  V I +VT+ K
Sbjct: 39  RDPVFFSIYKTILDYYHKYKENLPKYTTEELNFPGVSIESVTVDK 83


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 116 FCNNYKQILDYYKS 75
           F   YK+I+DYY S
Sbjct: 418 FYRIYKRIIDYYHS 431


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 116 FCNNYKQILDYYKS 75
           F   YK+I+DYY S
Sbjct: 418 FYRIYKRIIDYYHS 431


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,483
Number of Sequences: 438
Number of extensions: 4448
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)