Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1979
         (673 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR533544-1|CAG38575.1|  479|Homo sapiens SAS10 protein.                30   8.7  
BC004546-1|AAH04546.1|  479|Homo sapiens disrupter of silencing ...    30   8.7  
AK026909-1|BAB15588.1|  479|Homo sapiens protein ( Homo sapiens ...    30   8.7  
AF271212-1|AAF91408.1|  479|Homo sapiens disrupter of silencing ...    30   8.7  

>CR533544-1|CAG38575.1|  479|Homo sapiens SAS10 protein.
          Length = 479

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +3

Query: 375 QKDDLGIADSDVEGQEKSDDDLPDSKAWGKNKQSYYATDYVDK 503
           ++++    D     Q +++  +  S +WG+ K+ YY TDY  K
Sbjct: 102 EEEENADGDGGSSVQSEAEASVDPSLSWGQRKKLYYDTDYGSK 144


>BC004546-1|AAH04546.1|  479|Homo sapiens disrupter of silencing 10
           protein.
          Length = 479

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 12/74 (16%)
 Frame = +3

Query: 318 ESDSEEEMYAFXXXXXXXXQKDDLGIADSDVEGQEKSDDD------------LPDSKAWG 461
           E D EEE              +D G A  + E +E +DDD            +  S +WG
Sbjct: 72  EEDGEEEEEEVLALDMDDEDDEDGGNAGEEEE-EENADDDGGSSVQSEAEASVDPSLSWG 130

Query: 462 KNKQSYYATDYVDK 503
           + K+ YY TDY  K
Sbjct: 131 QRKKLYYDTDYGSK 144


>AK026909-1|BAB15588.1|  479|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23256 fis, clone COL05534. ).
          Length = 479

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 12/74 (16%)
 Frame = +3

Query: 318 ESDSEEEMYAFXXXXXXXXQKDDLGIADSDVEGQEKSDDD------------LPDSKAWG 461
           E D EEE              +D G A  + E +E +DDD            +  S +WG
Sbjct: 72  EEDGEEEEEEVLALDMDDEDDEDGGNAGEEEE-EENADDDGGSSVQSEAEASVDPSLSWG 130

Query: 462 KNKQSYYATDYVDK 503
           + K+ YY TDY  K
Sbjct: 131 QRKKLYYDTDYGSK 144


>AF271212-1|AAF91408.1|  479|Homo sapiens disrupter of silencing
           SAS10 protein.
          Length = 479

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 12/74 (16%)
 Frame = +3

Query: 318 ESDSEEEMYAFXXXXXXXXQKDDLGIADSDVEGQEKSDDD------------LPDSKAWG 461
           E D EEE              +D G A  + E +E +DDD            +  S +WG
Sbjct: 72  EEDGEEEEEEVLALDMDDEDDEDGGNAGEEEE-EENADDDGGSSVQSEAEASVDPSLSWG 130

Query: 462 KNKQSYYATDYVDK 503
           + K+ YY TDY  K
Sbjct: 131 QRKKLYYDTDYGSK 144


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,207,688
Number of Sequences: 237096
Number of extensions: 1267442
Number of successful extensions: 6903
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6899
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)