Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1975
         (775 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ domain-c...    30   3.1  
AE014296-2384|AAF49739.1| 1100|Drosophila melanogaster CG9598-PA...    30   3.1  
AY119276-1|AAM51136.1|  714|Drosophila melanogaster SD26211p pro...    29   7.1  
AE014134-1174|AAN10601.1|  287|Drosophila melanogaster CG17377-P...    29   7.1  

>DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ
            domain-containing proteinBBG-LP10 protein.
          Length = 1842

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
 Frame = -1

Query: 496  NAQHLSTSAPNMSKDTPRAHSNQAGLSAPEQPLYVEPVVSTANMLSAVN*R----SLAAG 329
            +A +   +  N+ +   R+ S   GL  PE+P  +EP++    + S V       S  +G
Sbjct: 1083 DAANRKAAITNILEQRRRSLSKLRGLVIPERPQLLEPILDLPEIKSQVKAASGEDSTDSG 1142

Query: 328  IGRGCRCNSVRNCR 287
            +G   R    RNC+
Sbjct: 1143 LGESHRSTVNRNCQ 1156


>AE014296-2384|AAF49739.1| 1100|Drosophila melanogaster CG9598-PA
           protein.
          Length = 1100

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
 Frame = -1

Query: 496 NAQHLSTSAPNMSKDTPRAHSNQAGLSAPEQPLYVEPVVSTANMLSAVN*R----SLAAG 329
           +A +   +  N+ +   R+ S   GL  PE+P  +EP++    + S V       S  +G
Sbjct: 341 DAANRKAAITNILEQRRRSLSKLRGLVIPERPQLLEPILDLPEIKSQVKAASGEDSTDSG 400

Query: 328 IGRGCRCNSVRNCR 287
           +G   R    RNC+
Sbjct: 401 LGESHRSTVNRNCQ 414


>AY119276-1|AAM51136.1|  714|Drosophila melanogaster SD26211p
           protein.
          Length = 714

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 20/68 (29%), Positives = 28/68 (41%)
 Frame = -3

Query: 473 RSEHEQGYAESALQPGWSLCTGTTFIRGTGRLNCKHVECGQLKESSGRHRQGLSVQQRAE 294
           RSE +Q  A S+ +  +   T         R     + CG LK  +  H   LS Q  A+
Sbjct: 594 RSEKQQSVALSSTEAEYMALTTACKEAIALRRLIVEIGCGDLKTPTVMHGDNLSAQHLAK 653

Query: 293 LPQHEAGT 270
            P H + T
Sbjct: 654 NPVHHSRT 661


>AE014134-1174|AAN10601.1|  287|Drosophila melanogaster CG17377-PC,
           isoform C protein.
          Length = 287

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 268 KVPASCCGSSARCCTDSPCRCRP 336
           +V   CCG    CC  SPC C P
Sbjct: 96  RVAGGCCGCGPCCCNVSPC-CGP 117


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,609,515
Number of Sequences: 53049
Number of extensions: 686358
Number of successful extensions: 2571
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2570
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)