Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1974
(726 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001813-1|AAN71568.1| 316|Drosophila melanogaster RH35959p pro... 102 6e-22
AY061202-1|AAL28750.1| 389|Drosophila melanogaster LD15586p pro... 102 6e-22
AE013599-3535|AAM68234.1| 316|Drosophila melanogaster CG3082-PD... 102 6e-22
AE013599-3534|AAF46949.2| 389|Drosophila melanogaster CG3082-PC... 102 6e-22
AE013599-3533|AAF46948.1| 389|Drosophila melanogaster CG3082-PB... 102 6e-22
AE013599-3532|AAF46947.1| 389|Drosophila melanogaster CG3082-PA... 102 6e-22
AE013599-93|AAF57322.1| 343|Drosophila melanogaster CG8245-PA p... 34 0.17
AY089637-1|AAL90375.1| 343|Drosophila melanogaster RE54285p pro... 33 0.30
AE014298-1816|AAG22348.1| 644|Drosophila melanogaster CG3754-PA... 31 1.6
M28643-1|AAA28576.1| 222|Drosophila melanogaster protein ( D.me... 29 4.9
M11947-1|AAA51466.1| 222|Drosophila melanogaster myosin light c... 29 4.9
BT011346-1|AAR96138.1| 217|Drosophila melanogaster RH35841p pro... 29 4.9
AY060369-1|AAL25408.1| 222|Drosophila melanogaster LD22691p pro... 29 4.9
AE014297-4554|AAF57016.1| 222|Drosophila melanogaster CG2184-PA... 29 4.9
AE014297-4553|AAN14222.2| 201|Drosophila melanogaster CG2184-PB... 29 4.9
BT023707-1|AAY85107.1| 510|Drosophila melanogaster IP01172p pro... 29 8.5
BT022192-1|AAY51586.1| 510|Drosophila melanogaster IP01169p pro... 29 8.5
AE014297-4414|AAF56919.1| 510|Drosophila melanogaster CG15504-P... 29 8.5
>BT001813-1|AAN71568.1| 316|Drosophila melanogaster RH35959p
protein.
Length = 316
Score = 102 bits (244), Expect = 6e-22
Identities = 38/70 (54%), Positives = 57/70 (81%)
Frame = +3
Query: 510 WLLARQKHVMKYATLYLEQGFDVLSVSCTPWQLMWPMKGSQLVAGDVLKFMASNENEQPL 689
WL+A+QKH+ KYA +Y E GFDV+ V TPWQL+WP+KGSQ+VA + ++F+ +N++ +P+
Sbjct: 80 WLMAKQKHLKKYAQIYTEMGFDVVVVHITPWQLLWPVKGSQVVAAETIRFLENNKSYEPI 139
Query: 690 VVHGFSIAGY 719
V+HGFS+ Y
Sbjct: 140 VMHGFSVGAY 149
Score = 38.3 bits (85), Expect = 0.011
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 379 RTLHSQDITKNIQYISNEKVKLTTDPKTMKLDQQRDRPLCIMI 507
R L SQDITKN+ ++ K ++ DPKT+ + PL +M+
Sbjct: 36 RYLSSQDITKNMTLYTSTKTQVEVDPKTLAFKKPTGNPLVLMM 78
>AY061202-1|AAL28750.1| 389|Drosophila melanogaster LD15586p
protein.
Length = 389
Score = 102 bits (244), Expect = 6e-22
Identities = 38/70 (54%), Positives = 57/70 (81%)
Frame = +3
Query: 510 WLLARQKHVMKYATLYLEQGFDVLSVSCTPWQLMWPMKGSQLVAGDVLKFMASNENEQPL 689
WL+A+QKH+ KYA +Y E GFDV+ V TPWQL+WP+KGSQ+VA + ++F+ +N++ +P+
Sbjct: 153 WLMAKQKHLKKYAQIYTEMGFDVVVVHITPWQLLWPVKGSQVVAAETIRFLENNKSYEPI 212
Query: 690 VVHGFSIAGY 719
V+HGFS+ Y
Sbjct: 213 VMHGFSVGAY 222
Score = 38.3 bits (85), Expect = 0.011
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 379 RTLHSQDITKNIQYISNEKVKLTTDPKTMKLDQQRDRPLCIMI 507
R L SQDITKN+ ++ K ++ DPKT+ + PL +M+
Sbjct: 109 RYLSSQDITKNMTLYTSTKTQVEVDPKTLAFKKPTGNPLVLMM 151
>AE013599-3535|AAM68234.1| 316|Drosophila melanogaster CG3082-PD,
isoform D protein.
Length = 316
Score = 102 bits (244), Expect = 6e-22
Identities = 38/70 (54%), Positives = 57/70 (81%)
Frame = +3
Query: 510 WLLARQKHVMKYATLYLEQGFDVLSVSCTPWQLMWPMKGSQLVAGDVLKFMASNENEQPL 689
WL+A+QKH+ KYA +Y E GFDV+ V TPWQL+WP+KGSQ+VA + ++F+ +N++ +P+
Sbjct: 80 WLMAKQKHLKKYAQIYTEMGFDVVVVHITPWQLLWPVKGSQVVAAETIRFLENNKSYEPI 139
Query: 690 VVHGFSIAGY 719
V+HGFS+ Y
Sbjct: 140 VMHGFSVGAY 149
Score = 38.3 bits (85), Expect = 0.011
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 379 RTLHSQDITKNIQYISNEKVKLTTDPKTMKLDQQRDRPLCIMI 507
R L SQDITKN+ ++ K ++ DPKT+ + PL +M+
Sbjct: 36 RYLSSQDITKNMTLYTSTKTQVEVDPKTLAFKKPTGNPLVLMM 78
>AE013599-3534|AAF46949.2| 389|Drosophila melanogaster CG3082-PC,
isoform C protein.
Length = 389
Score = 102 bits (244), Expect = 6e-22
Identities = 38/70 (54%), Positives = 57/70 (81%)
Frame = +3
Query: 510 WLLARQKHVMKYATLYLEQGFDVLSVSCTPWQLMWPMKGSQLVAGDVLKFMASNENEQPL 689
WL+A+QKH+ KYA +Y E GFDV+ V TPWQL+WP+KGSQ+VA + ++F+ +N++ +P+
Sbjct: 153 WLMAKQKHLKKYAQIYTEMGFDVVVVHITPWQLLWPVKGSQVVAAETIRFLENNKSYEPI 212
Query: 690 VVHGFSIAGY 719
V+HGFS+ Y
Sbjct: 213 VMHGFSVGAY 222
Score = 38.3 bits (85), Expect = 0.011
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 379 RTLHSQDITKNIQYISNEKVKLTTDPKTMKLDQQRDRPLCIMI 507
R L SQDITKN+ ++ K ++ DPKT+ + PL +M+
Sbjct: 109 RYLSSQDITKNMTLYTSTKTQVEVDPKTLAFKKPTGNPLVLMM 151
>AE013599-3533|AAF46948.1| 389|Drosophila melanogaster CG3082-PB,
isoform B protein.
Length = 389
Score = 102 bits (244), Expect = 6e-22
Identities = 38/70 (54%), Positives = 57/70 (81%)
Frame = +3
Query: 510 WLLARQKHVMKYATLYLEQGFDVLSVSCTPWQLMWPMKGSQLVAGDVLKFMASNENEQPL 689
WL+A+QKH+ KYA +Y E GFDV+ V TPWQL+WP+KGSQ+VA + ++F+ +N++ +P+
Sbjct: 153 WLMAKQKHLKKYAQIYTEMGFDVVVVHITPWQLLWPVKGSQVVAAETIRFLENNKSYEPI 212
Query: 690 VVHGFSIAGY 719
V+HGFS+ Y
Sbjct: 213 VMHGFSVGAY 222
Score = 38.3 bits (85), Expect = 0.011
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 379 RTLHSQDITKNIQYISNEKVKLTTDPKTMKLDQQRDRPLCIMI 507
R L SQDITKN+ ++ K ++ DPKT+ + PL +M+
Sbjct: 109 RYLSSQDITKNMTLYTSTKTQVEVDPKTLAFKKPTGNPLVLMM 151
>AE013599-3532|AAF46947.1| 389|Drosophila melanogaster CG3082-PA,
isoform A protein.
Length = 389
Score = 102 bits (244), Expect = 6e-22
Identities = 38/70 (54%), Positives = 57/70 (81%)
Frame = +3
Query: 510 WLLARQKHVMKYATLYLEQGFDVLSVSCTPWQLMWPMKGSQLVAGDVLKFMASNENEQPL 689
WL+A+QKH+ KYA +Y E GFDV+ V TPWQL+WP+KGSQ+VA + ++F+ +N++ +P+
Sbjct: 153 WLMAKQKHLKKYAQIYTEMGFDVVVVHITPWQLLWPVKGSQVVAAETIRFLENNKSYEPI 212
Query: 690 VVHGFSIAGY 719
V+HGFS+ Y
Sbjct: 213 VMHGFSVGAY 222
Score = 38.3 bits (85), Expect = 0.011
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 379 RTLHSQDITKNIQYISNEKVKLTTDPKTMKLDQQRDRPLCIMI 507
R L SQDITKN+ ++ K ++ DPKT+ + PL +M+
Sbjct: 109 RYLSSQDITKNMTLYTSTKTQVEVDPKTLAFKKPTGNPLVLMM 151
>AE013599-93|AAF57322.1| 343|Drosophila melanogaster CG8245-PA
protein.
Length = 343
Score = 34.3 bits (75), Expect = 0.17
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 510 WLLARQKHVMKYATLYLEQGFDVLSVSCTPWQLMWPMKGSQLVAGDVLKFMAS-NENEQP 686
W + +++MKY+ +Y E+G + + L W + +LK + N + P
Sbjct: 83 WAGCQDRYLMKYSKIYEERGLITVRYTAPVDSLFWKRSEMIPIGEKILKLIQDMNFDAHP 142
Query: 687 LVVHGFSIAG 716
L+ H FS G
Sbjct: 143 LIFHIFSNGG 152
>AY089637-1|AAL90375.1| 343|Drosophila melanogaster RE54285p
protein.
Length = 343
Score = 33.5 bits (73), Expect = 0.30
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 510 WLLARQKHVMKYATLYLEQGFDVLSVSCTPWQLMWPMKGSQLVAGDVLKFMAS-NENEQP 686
W + +++MKY+ +Y E+G + + L W + ++K + N + P
Sbjct: 83 WAGCQDRYLMKYSKIYEERGLITVRYTAPVDSLFWKRSEMIPIGEKIIKLIQDMNFDAHP 142
Query: 687 LVVHGFSIAG 716
L+ H FS G
Sbjct: 143 LIFHIFSNGG 152
>AE014298-1816|AAG22348.1| 644|Drosophila melanogaster CG3754-PA
protein.
Length = 644
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 399 HHEEHSIH*QRESQTNNGSENNETGPAKRQASLHN 503
HH++H H Q++ TNN + NN + ++ N
Sbjct: 396 HHQQHQQHQQQQRITNNNNNNNNCNSIQNNNNMSN 430
>M28643-1|AAA28576.1| 222|Drosophila melanogaster protein (
D.melanogaster myosinlight chain 2 (MLC2) mRNA, complete
cds. ).
Length = 222
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -1
Query: 615 ATLAATECTTPRARRTPAPSTTSRIS*RASVGPAAS 508
A+ AA+E TP TPAP+ ++ S RAS G S
Sbjct: 23 ASEAASEAATPAPAATPAPAASATGSKRASGGSRGS 58
>M11947-1|AAA51466.1| 222|Drosophila melanogaster myosin light
chain 2 protein.
Length = 222
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -1
Query: 615 ATLAATECTTPRARRTPAPSTTSRIS*RASVGPAAS 508
A+ AA+E TP TPAP+ ++ S RAS G S
Sbjct: 23 ASEAASEAATPAPAATPAPAASATGSKRASGGSRGS 58
>BT011346-1|AAR96138.1| 217|Drosophila melanogaster RH35841p
protein.
Length = 217
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -1
Query: 615 ATLAATECTTPRARRTPAPSTTSRIS*RASVGPAAS 508
A+ AA+E TP TPAP+ ++ S RAS G S
Sbjct: 41 ASEAASEAATPAPAATPAPAASATGSKRASGGSRGS 76
>AY060369-1|AAL25408.1| 222|Drosophila melanogaster LD22691p
protein.
Length = 222
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -1
Query: 615 ATLAATECTTPRARRTPAPSTTSRIS*RASVGPAAS 508
A+ AA+E TP TPAP+ ++ S RAS G S
Sbjct: 23 ASEAASEAATPAPAATPAPAASATGSKRASGGSRGS 58
>AE014297-4554|AAF57016.1| 222|Drosophila melanogaster CG2184-PA,
isoform A protein.
Length = 222
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -1
Query: 615 ATLAATECTTPRARRTPAPSTTSRIS*RASVGPAAS 508
A+ AA+E TP TPAP+ ++ S RAS G S
Sbjct: 23 ASEAASEAATPAPAATPAPAASATGSKRASGGSRGS 58
>AE014297-4553|AAN14222.2| 201|Drosophila melanogaster CG2184-PB,
isoform B protein.
Length = 201
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -1
Query: 615 ATLAATECTTPRARRTPAPSTTSRIS*RASVGPAAS 508
A+ AA+E TP TPAP+ ++ S RAS G S
Sbjct: 23 ASEAASEAATPAPAATPAPAASATGSKRASGGSRGS 58
>BT023707-1|AAY85107.1| 510|Drosophila melanogaster IP01172p
protein.
Length = 510
Score = 28.7 bits (61), Expect = 8.5
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 399 HHEEHSIH*QRESQTNNGSENNETGPAKRQ 488
HH++H H ++SQ NG+E++ G + +
Sbjct: 174 HHQQHLSHPHQQSQRFNGNESDTDGRTRSE 203
>BT022192-1|AAY51586.1| 510|Drosophila melanogaster IP01169p
protein.
Length = 510
Score = 28.7 bits (61), Expect = 8.5
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 399 HHEEHSIH*QRESQTNNGSENNETGPAKRQ 488
HH++H H ++SQ NG+E++ G + +
Sbjct: 174 HHQQHLSHPHQQSQRFNGNESDTDGRTRSE 203
>AE014297-4414|AAF56919.1| 510|Drosophila melanogaster CG15504-PA
protein.
Length = 510
Score = 28.7 bits (61), Expect = 8.5
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 399 HHEEHSIH*QRESQTNNGSENNETGPAKRQ 488
HH++H H ++SQ NG+E++ G + +
Sbjct: 174 HHQQHLSHPHQQSQRFNGNESDTDGRTRSE 203
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,023,024
Number of Sequences: 53049
Number of extensions: 629098
Number of successful extensions: 2230
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2211
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -