Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1973
         (790 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011457-1|AAR99115.1|  323|Drosophila melanogaster RE31995p pro...    62   8e-10
BT003627-1|AAO39631.1|  295|Drosophila melanogaster AT31631p pro...    62   8e-10
AE014297-4303|AAF56843.1|  323|Drosophila melanogaster CG14517-P...    62   8e-10
AY095531-1|AAM12262.1|  403|Drosophila melanogaster RE56531p pro...    48   1e-05
AF132158-1|AAD34746.1|  403|Drosophila melanogaster unknown prot...    48   1e-05
AE013599-1860|AAF58268.1|  403|Drosophila melanogaster CG8536-PA...    48   1e-05
AE014297-3685|AAF56377.1|  322|Drosophila melanogaster CG11780-P...    35   0.15 
AB091099-1|BAC22695.1|  322|Drosophila melanogaster xylosylprote...    35   0.15 
AY094665-1|AAM11018.1|  322|Drosophila melanogaster AT28119p pro...    32   1.0  

>BT011457-1|AAR99115.1|  323|Drosophila melanogaster RE31995p
           protein.
          Length = 323

 Score = 62.1 bits (144), Expect = 8e-10
 Identities = 25/43 (58%), Positives = 30/43 (69%)
 Frame = +2

Query: 257 NEYFGWGAEDDDLYSRLRACNFKICRFGPEISQYHMFSHKLQR 385
           N Y+GWG EDDDLY RL+A N  ICRF  E S+Y M  HK ++
Sbjct: 237 NLYYGWGGEDDDLYERLQALNIDICRFAMEFSKYTMLKHKQEQ 279



 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 17/27 (62%), Positives = 22/27 (81%)
 Frame = +3

Query: 174 RFVLPYLTLFGGVISIRTSQYKMVNGM 254
           RF LPY  LFGGV++I T+QY+ +NGM
Sbjct: 209 RFRLPYRGLFGGVVAINTAQYQQINGM 235


>BT003627-1|AAO39631.1|  295|Drosophila melanogaster AT31631p
           protein.
          Length = 295

 Score = 62.1 bits (144), Expect = 8e-10
 Identities = 25/43 (58%), Positives = 30/43 (69%)
 Frame = +2

Query: 257 NEYFGWGAEDDDLYSRLRACNFKICRFGPEISQYHMFSHKLQR 385
           N Y+GWG EDDDLY RL+A N  ICRF  E S+Y M  HK ++
Sbjct: 209 NLYYGWGGEDDDLYERLQALNIDICRFAMEFSKYTMLKHKQEQ 251



 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 17/27 (62%), Positives = 22/27 (81%)
 Frame = +3

Query: 174 RFVLPYLTLFGGVISIRTSQYKMVNGM 254
           RF LPY  LFGGV++I T+QY+ +NGM
Sbjct: 181 RFRLPYRGLFGGVVAINTAQYQQINGM 207


>AE014297-4303|AAF56843.1|  323|Drosophila melanogaster CG14517-PA
           protein.
          Length = 323

 Score = 62.1 bits (144), Expect = 8e-10
 Identities = 25/43 (58%), Positives = 30/43 (69%)
 Frame = +2

Query: 257 NEYFGWGAEDDDLYSRLRACNFKICRFGPEISQYHMFSHKLQR 385
           N Y+GWG EDDDLY RL+A N  ICRF  E S+Y M  HK ++
Sbjct: 237 NLYYGWGGEDDDLYERLQALNIDICRFAMEFSKYTMLKHKQEQ 279



 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 17/27 (62%), Positives = 22/27 (81%)
 Frame = +3

Query: 174 RFVLPYLTLFGGVISIRTSQYKMVNGM 254
           RF LPY  LFGGV++I T+QY+ +NGM
Sbjct: 209 RFRLPYRGLFGGVVAINTAQYQQINGM 235


>AY095531-1|AAM12262.1|  403|Drosophila melanogaster RE56531p
           protein.
          Length = 403

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 18/43 (41%), Positives = 28/43 (65%)
 Frame = +2

Query: 257 NEYFGWGAEDDDLYSRLRACNFKICRFGPEISQYHMFSHKLQR 385
           N +FGWG EDDD+ +RL+  N  I R+   I++Y M  H+ ++
Sbjct: 310 NSFFGWGGEDDDMSNRLKHANLFISRYPVNIARYKMLKHQKEK 352



 Score = 29.5 bits (63), Expect = 5.5
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 177 FVLPYLTLFGGVISIRTSQYKMVNGMVTS 263
           F LPY ++FGGV ++    ++ VNG   S
Sbjct: 283 FRLPYRSIFGGVSAMTREHFQAVNGFSNS 311


>AF132158-1|AAD34746.1|  403|Drosophila melanogaster unknown
           protein.
          Length = 403

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 18/43 (41%), Positives = 28/43 (65%)
 Frame = +2

Query: 257 NEYFGWGAEDDDLYSRLRACNFKICRFGPEISQYHMFSHKLQR 385
           N +FGWG EDDD+ +RL+  N  I R+   I++Y M  H+ ++
Sbjct: 310 NSFFGWGGEDDDMSNRLKHANLFISRYPVNIARYKMLKHQKEK 352



 Score = 29.5 bits (63), Expect = 5.5
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 177 FVLPYLTLFGGVISIRTSQYKMVNGMVTS 263
           F LPY ++FGGV ++    ++ VNG   S
Sbjct: 283 FRLPYRSIFGGVSAMTREHFQAVNGFSNS 311


>AE013599-1860|AAF58268.1|  403|Drosophila melanogaster CG8536-PA
           protein.
          Length = 403

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 18/43 (41%), Positives = 28/43 (65%)
 Frame = +2

Query: 257 NEYFGWGAEDDDLYSRLRACNFKICRFGPEISQYHMFSHKLQR 385
           N +FGWG EDDD+ +RL+  N  I R+   I++Y M  H+ ++
Sbjct: 310 NSFFGWGGEDDDMSNRLKHANLFISRYPVNIARYKMLKHQKEK 352



 Score = 29.5 bits (63), Expect = 5.5
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 177 FVLPYLTLFGGVISIRTSQYKMVNGMVTS 263
           F LPY ++FGGV ++    ++ VNG   S
Sbjct: 283 FRLPYRSIFGGVSAMTREHFQAVNGFSNS 311


>AE014297-3685|AAF56377.1|  322|Drosophila melanogaster CG11780-PA
           protein.
          Length = 322

 Score = 34.7 bits (76), Expect = 0.15
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 257 NEYFGWGAEDDDLYSRLRACNFKICR 334
           N+Y+GWG EDD+ + R+R    ++ R
Sbjct: 202 NQYWGWGLEDDEFFVRIRDAGLQVTR 227


>AB091099-1|BAC22695.1|  322|Drosophila melanogaster xylosylprotein
           beta4-galactosyltransferaseprotein.
          Length = 322

 Score = 34.7 bits (76), Expect = 0.15
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 257 NEYFGWGAEDDDLYSRLRACNFKICR 334
           N+Y+GWG EDD+ + R+R    ++ R
Sbjct: 202 NQYWGWGLEDDEFFVRIRDAGLQVTR 227


>AY094665-1|AAM11018.1|  322|Drosophila melanogaster AT28119p
           protein.
          Length = 322

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +2

Query: 257 NEYFGWGAEDDDLYSRLRACNFKICR 334
           N+Y+GWG ED + + R+R    ++ R
Sbjct: 202 NQYWGWGLEDGEFFVRIRDAGLQVTR 227


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,580,517
Number of Sequences: 53049
Number of extensions: 651588
Number of successful extensions: 1446
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1440
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)