Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1970
(790 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 36 0.001
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 36 0.002
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 35 0.002
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 34 0.004
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 33 0.008
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 33 0.008
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 32 0.018
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 31 0.031
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 29 0.12
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 29 0.22
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 28 0.38
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 28 0.38
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 27 0.66
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 26 1.5
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 25 2.7
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein. 25 3.5
DQ974172-1|ABJ52812.1| 409|Anopheles gambiae serpin 13 protein. 24 4.7
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 24 4.7
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 24 6.2
AJ441131-6|CAD29635.1| 152|Anopheles gambiae putative protein p... 24 6.2
AJ439398-5|CAD28128.1| 152|Anopheles gambiae putative protein p... 24 6.2
AF283269-1|AAG15374.1| 114|Anopheles gambiae ribosomal protein ... 24 6.2
AY534995-1|AAT07393.1| 461|Anopheles gambiae XK-related protein. 23 8.1
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 23 8.1
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 36.3 bits (80), Expect = 0.001
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 624 IPCARKVKYLGVTLDASMTFRPHIKSVRDRAAFI 725
+ +R ++YLGVTL +++ PH+K V +RA I
Sbjct: 724 VTSSRSIRYLGVTLQDKLSWLPHVKEVTERAGKI 757
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 35.5 bits (78), Expect = 0.002
Identities = 16/42 (38%), Positives = 28/42 (66%)
Frame = +3
Query: 603 ITLFRQPIPCARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 728
IT+ +P +R +KYLGV L ++++ PH+K+V +A I+
Sbjct: 732 ITVGGTEVPFSRTLKYLGVRLHYNLSWVPHVKAVIQKATQIV 773
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 35.1 bits (77), Expect = 0.002
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 600 PITLFRQPIPCARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRL 737
P+ + + R ++YLGV L +++RPH++ V D+A ++ L
Sbjct: 726 PVNICGVEVRSKRSIRYLGVMLHDHLSWRPHVEMVADKALRVVRAL 771
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 34.3 bits (75), Expect = 0.004
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +3
Query: 624 IPCARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 728
+P +R +KYLGV + A +++ PH+K + +A I+
Sbjct: 800 VPFSRSIKYLGVRVHAHLSWVPHVKEITLKATRIV 834
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 33.5 bits (73), Expect = 0.008
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 624 IPCARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRS 761
I +R +KYLG+ +D + + HIK V +RA L M+ RS
Sbjct: 708 IRSSRHLKYLGIMIDDRLEYTQHIKYVAERAVTNTNALVRMMPNRS 753
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 33.5 bits (73), Expect = 0.008
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +3
Query: 624 IPCARKVKYLGVTLDASMTFRPHIKSVRDRAAFI---LGRLYP 743
+P +R +K+LGV + +++ PH+ +V RA I +GRL P
Sbjct: 744 VPYSRSIKHLGVLVHDHLSWIPHVTAVTQRAVQIAQAVGRLMP 786
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 32.3 bits (70), Expect = 0.018
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +3
Query: 594 TPPITLFRQ---PIPCARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 728
TPP FR + +R ++YLGV L + +R H+ V ++A+ ++
Sbjct: 771 TPPQVTFRVGDVEVQSSRSIRYLGVQLQDHLKWRDHVTKVSEKASRVV 818
Score = 23.8 bits (49), Expect = 6.2
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +2
Query: 293 RPLTAGVPQGXXXXXXXXXXXXN---DIPRSPSNQLALFADD 409
R +TAGVPQG + D+P P ++ +ADD
Sbjct: 680 RHVTAGVPQGSILGPTLWNIMYDGVLDVPLPPDVEVIGYADD 721
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 31.5 bits (68), Expect = 0.031
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 624 IPCARKVKYLGVTLDASMTFRPHIKSVRDRA 716
+ +R ++YLGVTL +++ PH++ V RA
Sbjct: 791 VTSSRTMRYLGVTLHDHLSWLPHVREVTTRA 821
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 29.5 bits (63), Expect = 0.12
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 242 LVEPPFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRS-PSNQLALFADDTNV 418
L+ + +++ S ++GVPQG ND+ + P + ++LFADD +
Sbjct: 720 LIHRTYIVKIDKHMSKEIVSSSGVPQGSNIGPLLFILFINDVTLALPPDSISLFADDAKI 779
Query: 419 Y 421
+
Sbjct: 780 F 780
Score = 28.7 bits (61), Expect = 0.22
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 645 KYLGVTLDASMTFRPHIKSVRDRAAFILG 731
K LGV LD+S+ F+ HI V R +LG
Sbjct: 845 KDLGVLLDSSLNFKQHIDDVVARGNQLLG 873
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 28.7 bits (61), Expect = 0.22
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 624 IPCARKVKYLGVTLDASMTFRPHIK 698
I R +KYLGV +D ++FR H++
Sbjct: 699 IESIRHLKYLGVIIDDRLSFRKHVE 723
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 27.9 bits (59), Expect = 0.38
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = +3
Query: 588 NLTPPITLFRQPIPCARKVKYLGVTLDASMTFRPHIKSVRDRA 716
N+ P+ + R ++YLGV +D ++++ H++ +A
Sbjct: 733 NINVPVVINGVERRTTRSIRYLGVVIDNQLSWKSHVEYCTTKA 775
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 27.9 bits (59), Expect = 0.38
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 633 ARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMI 749
+R +KYLG+ LD + + HI+ +RA + L M+
Sbjct: 706 SRTLKYLGMVLDDRLEYTSHIRYAVERATKLWTTLVRMM 744
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 27.1 bits (57), Expect = 0.66
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 624 IPCARKVKYLGVTLDASMTFRPHIK 698
+ R +KYLGV +D + F+ H++
Sbjct: 760 VESTRSLKYLGVVIDDRLKFKSHLE 784
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 25.8 bits (54), Expect = 1.5
Identities = 8/32 (25%), Positives = 21/32 (65%)
Frame = +3
Query: 636 RKVKYLGVTLDASMTFRPHIKSVRDRAAFILG 731
+ ++YLGV + ++++PH++ +A ++G
Sbjct: 735 QSIRYLGVQIHDHLSWKPHVELSTAKALRVVG 766
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 25.0 bits (52), Expect = 2.7
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +3
Query: 600 PITLFRQPIPCARKVKYLGVTLDASMTFRPHIKSVRDRA 716
PI + I + ++YLGV + +RPH+ ++A
Sbjct: 720 PIRVGGLEIRSKQAIRYLGVMIHDHFLWRPHVTMAVEKA 758
>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
Length = 1152
Score = 24.6 bits (51), Expect = 3.5
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +2
Query: 647 VPGRYPGCIDDIPP-AYKICP*PCRVYSR 730
VP R C D P A + CP PCR Y R
Sbjct: 648 VPTRELLCELDTPSTAIRHCPAPCRCYIR 676
>DQ974172-1|ABJ52812.1| 409|Anopheles gambiae serpin 13 protein.
Length = 409
Score = 24.2 bits (50), Expect = 4.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 213 DSLVLIIRGFLSNRLFDIESKEPAPPRDLSQLESHKALSSHPSYL 347
D+ +L + G SN + +P+P D+S LE+H S S L
Sbjct: 202 DATILALPGSTSN--VSVFFLKPSPDTDVSTLETHLRNQSISSVL 244
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 24.2 bits (50), Expect = 4.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 694 ICGRNVIDASRVTPRYLTFLAQGMG 620
+CG +D ++VT TFL G G
Sbjct: 805 VCGARAMDIAKVTCTVNTFLWDGSG 829
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 23.8 bits (49), Expect = 6.2
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +2
Query: 203 GRAG*SRAHHTGLLVEPPFRYRVEGTRSSPRPLTAGVPQG 322
G G + A G PP +V+G S PLT + G
Sbjct: 540 GSPGATLATPGGTKARPPSAQQVDGRESVRSPLTVSMDSG 579
>AJ441131-6|CAD29635.1| 152|Anopheles gambiae putative protein
protein.
Length = 152
Score = 23.8 bits (49), Expect = 6.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 642 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLY 740
V+YLG + FRP IK + A++ + Y
Sbjct: 14 VRYLGYANEIGEAFRPVIKKIFVHASYAVAISY 46
>AJ439398-5|CAD28128.1| 152|Anopheles gambiae putative protein
protein.
Length = 152
Score = 23.8 bits (49), Expect = 6.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 642 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLY 740
V+YLG + FRP IK + A++ + Y
Sbjct: 14 VRYLGYANEIGEAFRPVIKKIFVHASYAVAISY 46
>AF283269-1|AAG15374.1| 114|Anopheles gambiae ribosomal protein S26
protein.
Length = 114
Score = 23.8 bits (49), Expect = 6.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 184 CKRCCANGRLIHRFVVRN 131
C RC + I +FV+RN
Sbjct: 25 CARCVPKDKAIKKFVIRN 42
>AY534995-1|AAT07393.1| 461|Anopheles gambiae XK-related protein.
Length = 461
Score = 23.4 bits (48), Expect = 8.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 532 AVLFAGLMLCAIFGTTVLGLGCALKLLR 449
+VL+ GL+ C T ++G+G L R
Sbjct: 413 SVLWTGLLTCFPIATFLVGIGLMLVFYR 440
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 23.4 bits (48), Expect = 8.1
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = +2
Query: 293 RPLTAGVPQGXXXXXXXXXXXXNDIPRSPSNQLAL----FADDTNVYYSSRSKSLIA 451
R ++AGVPQG +D+ R P L FADD + R+ ++
Sbjct: 615 RTVSAGVPQGSVLGPTLWNVMYDDLLRLPLEGLRADIIGFADDVAFTFLGRTTEQVS 671
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 843,869
Number of Sequences: 2352
Number of extensions: 18878
Number of successful extensions: 91
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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