Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1970
(790 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110294-1|AAI10295.1| 311|Homo sapiens PDE4DIP protein protein. 33 1.6
BC025406-1|AAH25406.1| 310|Homo sapiens phosphodiesterase 4D in... 33 1.6
AL590452-1|CAH72521.1| 310|Homo sapiens phosphodiesterase 4D in... 33 1.6
AL138791-2|CAI22527.1| 310|Homo sapiens phosphodiesterase 4D in... 33 1.6
AL138791-1|CAI22526.1| 109|Homo sapiens phosphodiesterase 4D in... 33 1.6
BC100790-1|AAI00791.1| 284|Homo sapiens ADAMTSL1 protein protein. 31 3.6
BC100788-1|AAI00789.1| 467|Homo sapiens ADAMTSL1 protein protein. 31 3.6
AL591423-1|CAM13086.1| 1263|Homo sapiens ADAMTS-like 1 protein. 31 3.6
AL353895-2|CAM20931.1| 1263|Homo sapiens ADAMTS-like 1 protein. 31 3.6
AL158150-6|CAM14352.1| 1263|Homo sapiens ADAMTS-like 1 protein. 31 3.6
AL158150-3|CAO03592.1| 463|Homo sapiens ADAMTS-like 1 protein. 31 3.6
AK128724-1|BAC87592.1| 160|Homo sapiens protein ( Homo sapiens ... 31 3.6
BC111554-1|AAI11555.1| 439|Homo sapiens hypothetical protein FL... 31 4.7
>BC110294-1|AAI10295.1| 311|Homo sapiens PDE4DIP protein protein.
Length = 311
Score = 32.7 bits (71), Expect = 1.6
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = -2
Query: 294 RGEERVPSTRYRKGGSTRSPV**ARDYPARPCKYPWPANGAARMVASSTASSFATP 127
R R T YR G +TR+P R P+R + P PA A A++ ATP
Sbjct: 21 RASRRAHYTPYRSGDATRTPQ-SPRQTPSRERRRPEPAGSWAAAAEEEEAAAAATP 75
>BC025406-1|AAH25406.1| 310|Homo sapiens phosphodiesterase 4D
interacting protein (myomegalin) protein.
Length = 310
Score = 32.7 bits (71), Expect = 1.6
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = -2
Query: 294 RGEERVPSTRYRKGGSTRSPV**ARDYPARPCKYPWPANGAARMVASSTASSFATP 127
R R T YR G +TR+P R P+R + P PA A A++ ATP
Sbjct: 21 RASRRAHYTPYRSGDATRTPQ-SPRQTPSRERRRPEPAGSWAAAAEEEEAAAAATP 75
>AL590452-1|CAH72521.1| 310|Homo sapiens phosphodiesterase 4D
interacting protein (myomegalin) protein.
Length = 310
Score = 32.7 bits (71), Expect = 1.6
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = -2
Query: 294 RGEERVPSTRYRKGGSTRSPV**ARDYPARPCKYPWPANGAARMVASSTASSFATP 127
R R T YR G +TR+P R P+R + P PA A A++ ATP
Sbjct: 21 RASRRAHYTPYRSGDATRTPQ-SPRQTPSRERRRPEPAGSWAAAAEEEEAAAAATP 75
>AL138791-2|CAI22527.1| 310|Homo sapiens phosphodiesterase 4D
interacting protein (myomegalin) protein.
Length = 310
Score = 32.7 bits (71), Expect = 1.6
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = -2
Query: 294 RGEERVPSTRYRKGGSTRSPV**ARDYPARPCKYPWPANGAARMVASSTASSFATP 127
R R T YR G +TR+P R P+R + P PA A A++ ATP
Sbjct: 21 RASRRAHYTPYRSGDATRTPQ-SPRQTPSRERRRPEPAGSWAAAAEEEEAAAAATP 75
>AL138791-1|CAI22526.1| 109|Homo sapiens phosphodiesterase 4D
interacting protein (myomegalin) protein.
Length = 109
Score = 32.7 bits (71), Expect = 1.6
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = -2
Query: 294 RGEERVPSTRYRKGGSTRSPV**ARDYPARPCKYPWPANGAARMVASSTASSFATP 127
R R T YR G +TR+P R P+R + P PA A A++ ATP
Sbjct: 21 RASRRAHYTPYRSGDATRTPQ-SPRQTPSRERRRPEPAGSWAAAAEEEEAAAAATP 75
>BC100790-1|AAI00791.1| 284|Homo sapiens ADAMTSL1 protein protein.
Length = 284
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = +1
Query: 190 RVLTWACRIVSCSSYGASCRTAFSISSRRNPLLPATSHSWSPT----RLCPLTP 339
RV W +C +YG R + +R N +P SW P + C +TP
Sbjct: 193 RVSLWTLCTATCGNYGFQSRRVECVHARTNKAVPEHLCSWGPRPANWQRCNITP 246
>BC100788-1|AAI00789.1| 467|Homo sapiens ADAMTSL1 protein protein.
Length = 467
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = +1
Query: 190 RVLTWACRIVSCSSYGASCRTAFSISSRRNPLLPATSHSWSPT----RLCPLTP 339
RV W +C +YG R + +R N +P SW P + C +TP
Sbjct: 376 RVSLWTLCTATCGNYGFQSRRVECVHARTNKAVPEHLCSWGPRPANWQRCNITP 429
>AL591423-1|CAM13086.1| 1263|Homo sapiens ADAMTS-like 1 protein.
Length = 1263
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = +1
Query: 190 RVLTWACRIVSCSSYGASCRTAFSISSRRNPLLPATSHSWSPT----RLCPLTP 339
RV W +C +YG R + +R N +P SW P + C +TP
Sbjct: 1172 RVSLWTLCTATCGNYGFQSRRVECVHARTNKAVPEHLCSWGPRPANWQRCNITP 1225
>AL353895-2|CAM20931.1| 1263|Homo sapiens ADAMTS-like 1 protein.
Length = 1263
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = +1
Query: 190 RVLTWACRIVSCSSYGASCRTAFSISSRRNPLLPATSHSWSPT----RLCPLTP 339
RV W +C +YG R + +R N +P SW P + C +TP
Sbjct: 1172 RVSLWTLCTATCGNYGFQSRRVECVHARTNKAVPEHLCSWGPRPANWQRCNITP 1225
>AL158150-6|CAM14352.1| 1263|Homo sapiens ADAMTS-like 1 protein.
Length = 1263
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = +1
Query: 190 RVLTWACRIVSCSSYGASCRTAFSISSRRNPLLPATSHSWSPT----RLCPLTP 339
RV W +C +YG R + +R N +P SW P + C +TP
Sbjct: 1172 RVSLWTLCTATCGNYGFQSRRVECVHARTNKAVPEHLCSWGPRPANWQRCNITP 1225
>AL158150-3|CAO03592.1| 463|Homo sapiens ADAMTS-like 1 protein.
Length = 463
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = +1
Query: 190 RVLTWACRIVSCSSYGASCRTAFSISSRRNPLLPATSHSWSPT----RLCPLTP 339
RV W +C +YG R + +R N +P SW P + C +TP
Sbjct: 372 RVSLWTLCTATCGNYGFQSRRVECVHARTNKAVPEHLCSWGPRPANWQRCNITP 425
>AK128724-1|BAC87592.1| 160|Homo sapiens protein ( Homo sapiens
cDNA FLJ46891 fis, clone UTERU3018255. ).
Length = 160
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Frame = +1
Query: 190 RVLTWACRIVSCSSYGASCRTAFSISSRRNPLLPATSHSWSPT----RLCPLTP 339
RV W +C +YG R + +R N +P SW P + C +TP
Sbjct: 65 RVSLWTLCTATCGNYGFQSRRVECVHARTNKAVPEHLCSWGPRPANWQRCNITP 118
>BC111554-1|AAI11555.1| 439|Homo sapiens hypothetical protein
FLJ25037 protein.
Length = 439
Score = 31.1 bits (67), Expect = 4.7
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 259 SISSRRNPLLPATSHSWSPTRLCPLTPPI*LIRQRYSPVAVEPV 390
S SS +PL A W+P+ LCP T P +RY P ++ P+
Sbjct: 23 SRSSSASPL--AACAGWAPSALCPTTSP----SRRYGPWSIVPI 60
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,488,357
Number of Sequences: 237096
Number of extensions: 2917273
Number of successful extensions: 9354
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9349
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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