Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1970
(790 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 25 0.80
AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding pr... 24 1.4
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 23 2.4
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 23 2.4
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 23 3.2
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 23 4.3
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 4.3
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.7
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.7
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.7
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 22 7.5
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 9.9
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 25.0 bits (52), Expect = 0.80
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 208 CRIVSCSSYGASCRTAFSISSRRNPLL 288
C IVSCS T +S RR+ L+
Sbjct: 359 CNIVSCSPQTVHPETIIDVSRRRSSLI 385
>AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding
protein protein.
Length = 132
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 116 PGRNSVIVKSFIRKEFDELMLLGLKVEKFCTVSG 15
P +N+ I K + +EF+E + G KV+ CT+ G
Sbjct: 57 PFKNTEI-KFKLGEEFEEETVDGRKVKSVCTLDG 89
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 23.4 bits (48), Expect = 2.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 158 PHPPLRRSQRRSPWPGRN 105
PHP LRR + PG N
Sbjct: 251 PHPRLRREAKPEAKPGNN 268
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 158 PHPPLRRSQRRSPWPGRN 105
PHP LRR PG N
Sbjct: 55 PHPRLRREAEPEAEPGNN 72
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 158 PHPPLRRSQRRSPWPGRN 105
PHP LRR PG N
Sbjct: 83 PHPRLRREAELEAEPGNN 100
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 158 PHPPLRRSQRRSPWPGRN 105
PHP LRR PG N
Sbjct: 111 PHPRLRREAEPEAEPGNN 128
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 158 PHPPLRRSQRRSPWPGRN 105
PHP LRR PG N
Sbjct: 139 PHPRLRREAELEAEPGNN 156
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 158 PHPPLRRSQRRSPWPGRN 105
PHP LRR PG N
Sbjct: 167 PHPRLRREAEPEAEPGNN 184
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 158 PHPPLRRSQRRSPWPGRN 105
PHP LRR PG N
Sbjct: 195 PHPRLRREAEPEAEPGNN 212
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 158 PHPPLRRSQRRSPWPGRN 105
PHP LRR PG N
Sbjct: 223 PHPRLRREAEPEAEPGNN 240
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 23.4 bits (48), Expect = 2.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 158 PHPPLRRSQRRSPWPGRN 105
PHP LRR + PG N
Sbjct: 139 PHPRLRREAKPEAEPGNN 156
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 158 PHPPLRRSQRRSPWPGRN 105
PHP LRR PG N
Sbjct: 27 PHPRLRREAEPEAEPGNN 44
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 158 PHPPLRRSQRRSPWPGRN 105
PHP LRR PG N
Sbjct: 55 PHPRLRREAEPEAEPGNN 72
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 158 PHPPLRRSQRRSPWPGRN 105
PHP LRR PG N
Sbjct: 83 PHPRLRREAEPEAEPGNN 100
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 158 PHPPLRRSQRRSPWPGRN 105
PHP LRR PG N
Sbjct: 111 PHPRLRREAEPEAEPGNN 128
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 158 PHPPLRRSQRRSPWPGRN 105
PHP LRR PG N
Sbjct: 167 PHPRLRREAEPEAEPGNN 184
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 23.0 bits (47), Expect = 3.2
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 158 PHPPLRRSQRRSPWPGRNSVI 96
PHP LRR PG N I
Sbjct: 56 PHPRLRREAEPKAEPGNNRPI 76
Score = 23.0 bits (47), Expect = 3.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 158 PHPPLRRSQRRSPWPGRN 105
PHP LRR PG N
Sbjct: 84 PHPRLRREAESEAEPGNN 101
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 158 PHPPLRRSQRRSPWPGRN 105
PHP LRR PG N
Sbjct: 56 PHPRLRREAEPEAEPGNN 73
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 158 PHPPLRRSQRRSPWPGRN 105
PHP LRR PG N
Sbjct: 84 PHPRLRREAEPEAEPGNN 101
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 158 PHPPLRRSQRRSPWPGRN 105
PHP LRR PG N
Sbjct: 112 PHPRLRREAEPEAEPGNN 129
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.6 bits (46), Expect = 4.3
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 96 NYRVTAWPRGSALRTT 143
NY T WP S + TT
Sbjct: 775 NYSTTRWPATSVITTT 790
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 180 NGAARMVASSTASSFATPIPVARP 109
N AA + S+F TPI RP
Sbjct: 356 NSAANPPSGYIRSAFGTPISTGRP 379
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 180 NGAARMVASSTASSFATPIPVARP 109
N AA + S+F TPI RP
Sbjct: 356 NSAANPPSGYIRSAFGTPISTGRP 379
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 180 NGAARMVASSTASSFATPIPVARP 109
N AA + S+F TPI RP
Sbjct: 356 NSAANPPSGYIRSAFGTPISTGRP 379
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 180 NGAARMVASSTASSFATPIPVARP 109
N AA + S+F TPI RP
Sbjct: 356 NSAANPPSGYIRSAFGTPISTGRP 379
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 180 NGAARMVASSTASSFATPIPVARP 109
N AA + S+F TPI RP
Sbjct: 356 NSAANPPSGYIRSAFGTPISTGRP 379
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 180 NGAARMVASSTASSFATPIPVARP 109
N AA + S+F TPI RP
Sbjct: 356 NSAANPPSGYIRSAFGTPISTGRP 379
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 5.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 180 NGAARMVASSTASSFATPIPVARP 109
N AA + S+F TPI RP
Sbjct: 424 NSAANPPSGYIRSAFGTPISTGRP 447
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 5.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -2
Query: 180 NGAARMVASSTASSFATPIPVARP 109
N AA + S+F TPI RP
Sbjct: 424 NSAANPPSGYIRSAFGTPISTGRP 447
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.8 bits (44), Expect = 7.5
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 258 FDIESKEPAPPRD 296
FD +SK+ PP D
Sbjct: 347 FDFQSKDQGPPND 359
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 9.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 266 DIEKAVRQEAPYDEHETIR 210
DI V + YDE +TIR
Sbjct: 166 DIVDPVEENETYDEFDTIR 184
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,391
Number of Sequences: 438
Number of extensions: 4987
Number of successful extensions: 35
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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