Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1969X
         (546 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450 CY...    26   0.70 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   3.8  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    24   3.8  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         23   5.0  
CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein ...    23   8.7  

>AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450
           CYP6P3 protein.
          Length = 509

 Score = 26.2 bits (55), Expect = 0.70
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -2

Query: 464 NVIDETDRSFVALESSTSVRSVTGMI 387
           NVIDET R +  +ES T V SV  +I
Sbjct: 368 NVIDETLRKYPPVESLTRVPSVDYLI 393


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 10/43 (23%), Positives = 23/43 (53%)
 Frame = -2

Query: 479  AQRFTNVIDETDRSFVALESSTSVRSVTGMIYYY*IRVLNVLE 351
            ++ F+ V+D  +  F+ + SS  +  +  + Y+Y I   N+ +
Sbjct: 1648 SETFSAVLDYLNMIFICIFSSECLMKIFALRYHYFIEPWNLFD 1690


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +1

Query: 220 YPIDVAVEGITSPITWM*RGNSSSMYRDIRVRLTRTI 330
           YP D  +      +T   RGN++     +++R T T+
Sbjct: 646 YPFDRRMPTAVRSLTDFTRGNTNMATSQVQIRFTNTV 682


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +2

Query: 80  CVSAIWAPFKALLYSDWIECNHNKTLN 160
           C    +  FKAL + DWI   H    N
Sbjct: 181 CKQKFYVDFKALKWDDWIIRPHGYYAN 207


>CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein
           protein.
          Length = 277

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +3

Query: 438 RSVSFVYYIGKALGKVLADLHNKGIRRKIY--IVLDT 542
           RSV F+Y+   A+    A L N G+ ++++  ++L+T
Sbjct: 3   RSVVFLYFALFAIVPFAAGLCNVGLGKRVFGDVLLET 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,597
Number of Sequences: 2352
Number of extensions: 10614
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)