Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1967
(672 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 26 0.28
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 2.0
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 2.0
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 3.5
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 4.6
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 6.1
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 22 6.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 8.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 8.1
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 26.2 bits (55), Expect = 0.28
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 168 DEQRILFDSPLTLILGQNGCGKTTIIECLDMQSLVK 275
+E +++ P+ I+G GKTT+++ L S+ K
Sbjct: 137 NESQLIKRHPIVTIMGHVDHGKTTLLDALRNTSIAK 172
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.4 bits (48), Expect = 2.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 180 ILFDSPLTLILGQNGCGKTTIIECL 254
IL +SP +ILGQ+ K ++ L
Sbjct: 22 ILANSPAIIILGQDSKAKAIVVNTL 46
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.4 bits (48), Expect = 2.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 180 ILFDSPLTLILGQNGCGKTTIIECL 254
IL +SP +ILGQ+ K ++ L
Sbjct: 60 ILANSPAIIILGQDSKAKAIVVNTL 84
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 237 LFYHIHFALISALMENQIVCVVRRYL 160
LFY+ F + S+L I C++ +L
Sbjct: 337 LFYNTDFIIYSSLSSFYIPCIIMVFL 362
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 4.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 223 DVVKQQ*LNA*ICNHWSNAAW*QERM 300
D +K + LNA + N W AA +RM
Sbjct: 504 DQLKSEELNAKVTNDWKFAAMVIDRM 529
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 6.1
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +1
Query: 337 STRSSEIKDCQCKRQTVGGDKVHEGDCLSQXKD 435
ST SE CK + GG+ DC + D
Sbjct: 20 STILSESAGTSCKWLSEGGNDTRSADCTLRVLD 52
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 622 KVKERFDEIFDADK 663
KVK RF+ +FD +K
Sbjct: 187 KVKLRFENLFDGNK 200
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 510 TLEDTSFVLPLSSTVE 463
T+EDTS LPLS E
Sbjct: 381 TVEDTSASLPLSGMQE 396
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 510 TLEDTSFVLPLSSTVE 463
T+EDTS LPLS E
Sbjct: 381 TVEDTSASLPLSGMQE 396
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 510 TLEDTSFVLPLSSTVE 463
T+EDTS LPLS E
Sbjct: 381 TVEDTSASLPLSGMQE 396
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 510 TLEDTSFVLPLSSTVE 463
T+EDTS LPLS E
Sbjct: 381 TVEDTSASLPLSGMQE 396
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 510 TLEDTSFVLPLSSTVE 463
T+EDTS LPLS E
Sbjct: 381 TVEDTSASLPLSGMQE 396
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 510 TLEDTSFVLPLSSTVE 463
T+EDTS LPLS E
Sbjct: 381 TVEDTSASLPLSGMQE 396
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 8.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 510 TLEDTSFVLPLSSTVE 463
T+EDTS LPLS E
Sbjct: 449 TVEDTSASLPLSGMQE 464
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 8.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 510 TLEDTSFVLPLSSTVE 463
T+EDTS LPLS E
Sbjct: 449 TVEDTSASLPLSGMQE 464
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,038
Number of Sequences: 438
Number of extensions: 3749
Number of successful extensions: 23
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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