Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1965X
         (324 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    55   8e-10
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    53   3e-09
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       32   0.005
AF026494-1|AAB81852.1|  113|Anopheles gambiae chitinase protein.       32   0.006
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   0.94 
AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.       24   1.6  
AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    23   3.8  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    21   8.8  
EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.    21   8.8  

>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 54.8 bits (126), Expect = 8e-10
 Identities = 22/40 (55%), Positives = 30/40 (75%)
 Frame = +3

Query: 84  SKVLCYYDSRSYVRESQARMLPVDLDPALSFCTHLLYGYA 203
           SKVLCYYD+ +++ E   ++   D+D AL FCTHL+YGYA
Sbjct: 26  SKVLCYYDAANFLIEGLGKVSLADIDAALPFCTHLVYGYA 65



 Score = 31.9 bits (69), Expect = 0.006
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +1

Query: 256 DRAHXNYRAITSLKAKYPGLTVL 324
           D    NYR +T LK+KYP L VL
Sbjct: 84  DTGKGNYRTVTQLKSKYPSLKVL 106


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 52.8 bits (121), Expect = 3e-09
 Identities = 22/42 (52%), Positives = 29/42 (69%)
 Frame = +3

Query: 78  THSKVLCYYDSRSYVRESQARMLPVDLDPALSFCTHLLYGYA 203
           T  KVLCYYD  + +RE   ++   D++ AL FCTHL+YGYA
Sbjct: 29  TGPKVLCYYDGSNALREGLGKVTVSDIELALPFCTHLMYGYA 70



 Score = 29.1 bits (62), Expect = 0.044
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +1

Query: 256 DRAHXNYRAITSLKAKYPGLTV 321
           D    ++RA+T+LK +YPGL V
Sbjct: 89  DSGKSHFRAVTTLKRRYPGLKV 110



 Score = 26.6 bits (56), Expect = 0.23
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 185 LVVRLCGIQPDTYKLVSLNENLD 253
           L+    G+  +TY+L SLNE+LD
Sbjct: 65  LMYGYAGVNAETYRLRSLNEDLD 87


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 32.3 bits (70), Expect = 0.005
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 87  KVLCYYDSRSYVRESQARMLPVDLDPALSFCTHLLYGY 200
           KV+CY  + +  R    R     +DP+L  CTHL+YG+
Sbjct: 32  KVVCYVGTWAVYRPGNGRYDIEHIDPSL--CTHLMYGF 67


>AF026494-1|AAB81852.1|  113|Anopheles gambiae chitinase protein.
          Length = 113

 Score = 31.9 bits (69), Expect = 0.006
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +3

Query: 114 SYVRESQARMLPVDLDPALSFCTHLLYGYAV 206
           ++ R+   + LP D+D  L  CTH++YG+AV
Sbjct: 2   AWYRQGNGKYLPEDIDSDL--CTHVVYGFAV 30


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -2

Query: 152 HRQHAGLRFSDIAPAVVVTKYFAVG 78
           H   AGL   D+A  VVV    A G
Sbjct: 493 HHHRAGLHHHDLASGVVVNAVLAAG 517


>AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.
          Length = 112

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +3

Query: 177 CTHLLYGYAV 206
           CTH++YG+AV
Sbjct: 21  CTHIVYGFAV 30


>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +1

Query: 85  AKYFVTTTAGAMSENLKPACCRWTSIP-LCRSAPTCC 192
           A+YFVT  A A + N    C +   +P L  +A  CC
Sbjct: 95  ARYFVTDPADAYNVNRTETCLQ--ELPALELNAEKCC 129


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 163 PLCRSAPTCCTAMR 204
           PLC    +CCT  R
Sbjct: 71  PLCTRLRSCCTRQR 84


>EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.
          Length = 155

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 82  WVTAGRALARAKSPTR 35
           W+ AGR +  A  PTR
Sbjct: 61  WMDAGRLVLPADEPTR 76


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 327,155
Number of Sequences: 2352
Number of extensions: 5538
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22045617
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)