Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1963
         (885 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M37884-1|AAA63259.1| 1274|Homo sapiens muscle beta spectrin prot...    30   9.7  
BC139788-1|AAI39789.1|  934|Homo sapiens SPTBN2 protein protein.       30   9.7  
AF465439-1|AAL73492.1| 1028|Homo sapiens beta I spectrin form be...    30   9.7  
AF026488-2|AAC79504.1|  228|Homo sapiens beta III spectrin protein.    30   9.7  
AF026488-1|AAC79503.1|  253|Homo sapiens beta III spectrin protein.    30   9.7  
AF026487-1|AAC79502.1|  491|Homo sapiens beta III spectrin protein.    30   9.7  
AB209415-1|BAD92652.1| 2332|Homo sapiens spectrin, beta, erythro...    30   9.7  
AB008567-1|BAA32700.1| 2390|Homo sapiens beta-spectrin III protein.    30   9.7  

>M37884-1|AAA63259.1| 1274|Homo sapiens muscle beta spectrin protein.
          Length = 1274

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -3

Query: 439  LNFYNDVPTL*AGMPYDGSKHRAGLKCASSLVTDSRKFEQFFLLRL 302
            L FY D   L  GMPY G +  A       +  + +K +  F LRL
Sbjct: 1161 LTFYKDAKNLALGMPYHGEEPLALRHAICEIAANYKKKKHVFKLRL 1206


>BC139788-1|AAI39789.1|  934|Homo sapiens SPTBN2 protein protein.
          Length = 934

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -3

Query: 442 SLNFYNDVPTL*AGMPYDGSKHRAGLKCASSLVTDSRKFEQFFLLRL 302
           SL FY D     AG+PY G    +  +   S+  D RK +  F L L
Sbjct: 798 SLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGL 844


>AF465439-1|AAL73492.1| 1028|Homo sapiens beta I spectrin form betaI
            sigma3 protein.
          Length = 1028

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -3

Query: 439  LNFYNDVPTL*AGMPYDGSKHRAGLKCASSLVTDSRKFEQFFLLRL 302
            L FY D   L  GMPY G +  A       +  + +K +  F LRL
Sbjct: 915  LTFYKDAKNLALGMPYHGEEPLALRHAICEIAANYKKKKHVFKLRL 960


>AF026488-2|AAC79504.1|  228|Homo sapiens beta III spectrin protein.
          Length = 228

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -3

Query: 442 SLNFYNDVPTL*AGMPYDGSKHRAGLKCASSLVTDSRKFEQFFLLRL 302
           SL FY D     AG+PY G    +  +   S+  D RK +  F L L
Sbjct: 117 SLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGL 163


>AF026488-1|AAC79503.1|  253|Homo sapiens beta III spectrin protein.
          Length = 253

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -3

Query: 442 SLNFYNDVPTL*AGMPYDGSKHRAGLKCASSLVTDSRKFEQFFLLRL 302
           SL FY D     AG+PY G    +  +   S+  D RK +  F L L
Sbjct: 117 SLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGL 163


>AF026487-1|AAC79502.1|  491|Homo sapiens beta III spectrin protein.
          Length = 491

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -3

Query: 442 SLNFYNDVPTL*AGMPYDGSKHRAGLKCASSLVTDSRKFEQFFLLRL 302
           SL FY D     AG+PY G    +  +   S+  D RK +  F L L
Sbjct: 355 SLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGL 401


>AB209415-1|BAD92652.1| 2332|Homo sapiens spectrin, beta, erythrocytic
            (includes spherocytosis, clinical type I) variant
            protein.
          Length = 2332

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -3

Query: 439  LNFYNDVPTL*AGMPYDGSKHRAGLKCASSLVTDSRKFEQFFLLRL 302
            L FY D   L  GMPY G +  A       +  + +K +  F LRL
Sbjct: 2219 LTFYKDAKNLALGMPYHGEEPLALRHAICEIAANYKKKKHVFKLRL 2264


>AB008567-1|BAA32700.1| 2390|Homo sapiens beta-spectrin III protein.
          Length = 2390

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -3

Query: 442  SLNFYNDVPTL*AGMPYDGSKHRAGLKCASSLVTDSRKFEQFFLLRL 302
            SL FY D     AG+PY G    +  +   S+  D RK +  F L L
Sbjct: 2254 SLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGL 2300


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,322,794
Number of Sequences: 237096
Number of extensions: 2375186
Number of successful extensions: 7613
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7611
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)