Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1961
         (715 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           32   0.021
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    27   0.58 
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    26   1.0  
DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    26   1.4  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   1.8  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   2.4  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.2  
DQ370044-1|ABD18605.1|   99|Anopheles gambiae putative salivary ...    23   7.2  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   9.5  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      23   9.5  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 31.9 bits (69), Expect = 0.021
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 379 MRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 492
           +RT   LRGH + +  + W    + L S    G + VW
Sbjct: 54  LRTNYNLRGHRSDVILVKWNEPYQKLASCDSSGIIFVW 91


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = -2

Query: 507 GRVAVPHDQLTVLTGRHQVPGITAPVHGVDLREMTAQGSSGAHLYATD 364
           GR +    ++ VL      P  + PV+ +D+ E    G+    L ATD
Sbjct: 493 GRTSTAQIRVVVLDQNDNFPEFSQPVYDIDVPENVIAGTVLLQLQATD 540


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 614  NRADVVQSTASDVGARGRVGAGHHP 540
            +R+ +++ TAS V  RGR G    P
Sbjct: 1663 SRSSIIEETASQVDMRGRKGTNSSP 1687


>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 398 CAVISRRSTPCTGAVIPGTWCRP 466
           CA ++    PCT   I G +C+P
Sbjct: 52  CADLNELQKPCTKQCIQGCFCKP 74


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 614  NRADVVQSTASDVGARGRVGAGHHP 540
            +R+ +V+ TAS V  +GR G    P
Sbjct: 1666 SRSSIVEETASQVDMKGRKGTNSSP 1690


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +1

Query: 241  INHERLDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPI 366
            IN+E   + R+E++ +  A++DA   A D S     +N E +
Sbjct: 1027 INNEAHKTTREESQRIYKAVKDAVVFALDLSQFGMLTNQEGV 1068


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 131 RRSKGHC*QKDRCVACCTCAAR 196
           RRS  HC Q+ R  +C   AA+
Sbjct: 38  RRSSAHCTQQTRQASCSDNAAQ 59


>DQ370044-1|ABD18605.1|   99|Anopheles gambiae putative salivary
           secreted peptide withTIL domain protein.
          Length = 99

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 428 CTGAVIPGTWCRP 466
           CTG  + G +CRP
Sbjct: 52  CTGVCVSGCFCRP 64


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 525  PLRSSWVMTCAYA-PSGSYVACGGLDNICSIYSLKTREGNV 644
            PLR  W   C +  PS + +     DNI  +  LK+REG V
Sbjct: 898  PLRK-WASNCPHILPSETEI-----DNIQRVIELKSREGAV 932


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 118 KIAGASIEGTLLTEGSVRCVLYVRGARLSIVC 213
           K+A     G +  E + RC+  VRGA+ +  C
Sbjct: 451 KMADMYSVGLVFWEMARRCITTVRGAKNTTTC 482


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,837
Number of Sequences: 2352
Number of extensions: 15896
Number of successful extensions: 59
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)