Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1961
(715 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical pr... 146 1e-35
X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein. 146 1e-35
AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeri... 146 1e-35
Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical pr... 76 2e-14
AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeri... 76 2e-14
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 38 0.007
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 34 0.088
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 33 0.15
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 32 0.47
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 32 0.47
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 32 0.47
AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical ... 31 0.62
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical... 31 1.1
AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical... 31 1.1
Z83016-1|CAB05407.1| 451|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z68314-8|CAA92666.1| 451|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z54281-9|CAA91052.1| 451|Caenorhabditis elegans Hypothetical pr... 30 1.4
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 30 1.4
AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical ... 30 1.4
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 30 1.4
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 30 1.4
Z92782-12|CAH60765.1| 328|Caenorhabditis elegans Hypothetical p... 30 1.9
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 30 1.9
U21321-1|AAG00051.1| 507|Caenorhabditis elegans Fizzy (cdc20 pr... 30 1.9
Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 29 2.5
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 29 2.5
AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore... 29 2.5
AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore... 29 2.5
Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical p... 29 3.3
Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical p... 29 3.3
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 29 3.3
U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 29 3.3
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 29 3.3
AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical ... 29 3.3
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 29 3.3
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 29 3.3
Z47808-2|CAA87770.1| 415|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 29 4.4
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 29 4.4
Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical p... 28 5.8
U40410-5|AAA81394.3| 1199|Caenorhabditis elegans Hypothetical pr... 28 5.8
DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagella... 28 5.8
AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical ... 28 5.8
AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical... 28 5.8
Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 28 7.6
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 28 7.6
U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical pr... 28 7.6
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 28 7.6
AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical ... 28 7.6
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 28 7.6
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 28 7.6
>Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical
protein F13D12.7 protein.
Length = 340
Score = 146 bits (355), Expect = 1e-35
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 507 HKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSG*LS 686
+KVHAIPLRSSWVMTCAYAPSGS+VACGGLDNICSIYSLKTREGNVRVSRELPGH+G LS
Sbjct: 88 NKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLS 147
Query: 687 CCRFLDDNQ 713
CCRFLDDNQ
Sbjct: 148 CCRFLDDNQ 156
Score = 144 bits (349), Expect = 6e-35
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = +1
Query: 256 LDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAMHW 435
LD LRQEAE LK+ IR+ARK+A DT+LA SNLEPIGRIQMRTRRTLRGHLAKIYAMHW
Sbjct: 4 LDQLRQEAEQLKSQIREARKSANDTTLATVASNLEPIGRIQMRTRRTLRGHLAKIYAMHW 63
Query: 436 GSDSRNLVSASQDGKLIVWDSH 501
SDSRNLVSASQDGKLIVWDS+
Sbjct: 64 ASDSRNLVSASQDGKLIVWDSY 85
>X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein.
Length = 340
Score = 146 bits (355), Expect = 1e-35
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 507 HKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSG*LS 686
+KVHAIPLRSSWVMTCAYAPSGS+VACGGLDNICSIYSLKTREGNVRVSRELPGH+G LS
Sbjct: 88 NKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLS 147
Query: 687 CCRFLDDNQ 713
CCRFLDDNQ
Sbjct: 148 CCRFLDDNQ 156
Score = 144 bits (349), Expect = 6e-35
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = +1
Query: 256 LDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAMHW 435
LD LRQEAE LK+ IR+ARK+A DT+LA SNLEPIGRIQMRTRRTLRGHLAKIYAMHW
Sbjct: 4 LDQLRQEAEQLKSQIREARKSANDTTLATVASNLEPIGRIQMRTRRTLRGHLAKIYAMHW 63
Query: 436 GSDSRNLVSASQDGKLIVWDSH 501
SDSRNLVSASQDGKLIVWDS+
Sbjct: 64 ASDSRNLVSASQDGKLIVWDSY 85
>AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeric G
protein beta subunit1 protein.
Length = 340
Score = 146 bits (355), Expect = 1e-35
Identities = 65/69 (94%), Positives = 68/69 (98%)
Frame = +3
Query: 507 HKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSG*LS 686
+KVHAIPLRSSWVMTCAYAPSGS+VACGGLDNICSIYSLKTREGNVRVSRELPGH+G LS
Sbjct: 88 NKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLS 147
Query: 687 CCRFLDDNQ 713
CCRFLDDNQ
Sbjct: 148 CCRFLDDNQ 156
Score = 144 bits (349), Expect = 6e-35
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = +1
Query: 256 LDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAMHW 435
LD LRQEAE LK+ IR+ARK+A DT+LA SNLEPIGRIQMRTRRTLRGHLAKIYAMHW
Sbjct: 4 LDQLRQEAEQLKSQIREARKSANDTTLATVASNLEPIGRIQMRTRRTLRGHLAKIYAMHW 63
Query: 436 GSDSRNLVSASQDGKLIVWDSH 501
SDSRNLVSASQDGKLIVWDS+
Sbjct: 64 ASDSRNLVSASQDGKLIVWDSY 85
>Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical
protein F52A8.2 protein.
Length = 356
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/82 (41%), Positives = 50/82 (60%)
Frame = +1
Query: 250 ERLDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAM 429
E L+ L EAE L+ + R D + QA L+ +G + ++ RR L+GH+ K+ M
Sbjct: 15 EYLEQLANEAEELRKKLDQERHKLNDIPIQQAAERLDVMGALGVKQRRILKGHVGKVLCM 74
Query: 430 HWGSDSRNLVSASQDGKLIVWD 495
W D R++VS+SQDGK+IVWD
Sbjct: 75 DWSLDKRHIVSSSQDGKVIVWD 96
Score = 71.3 bits (167), Expect = 6e-13
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = +3
Query: 507 HKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSG*LS 686
+K HA+ + ++WVM CA++PS +ACGGLDN CS+ L + ++ R++ H+ +S
Sbjct: 101 NKEHALTMPTTWVMACAFSPSSQMIACGGLDNKCSVVPLSFEDDIIQKKRQVATHTSYMS 160
Query: 687 CCRFL-DDN 710
CC FL DN
Sbjct: 161 CCTFLRSDN 169
>AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeric G
protein beta subunit2 protein.
Length = 356
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/82 (41%), Positives = 50/82 (60%)
Frame = +1
Query: 250 ERLDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAM 429
E L+ L EAE L+ + R D + QA L+ +G + ++ RR L+GH+ K+ M
Sbjct: 15 EYLEQLANEAEELRKKLDQERHKLNDIPIQQAAERLDVMGALGVKQRRILKGHVGKVLCM 74
Query: 430 HWGSDSRNLVSASQDGKLIVWD 495
W D R++VS+SQDGK+IVWD
Sbjct: 75 DWSLDKRHIVSSSQDGKVIVWD 96
Score = 71.3 bits (167), Expect = 6e-13
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = +3
Query: 507 HKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSG*LS 686
+K HA+ + ++WVM CA++PS +ACGGLDN CS+ L + ++ R++ H+ +S
Sbjct: 101 NKEHALTMPTTWVMACAFSPSSQMIACGGLDNKCSVVPLSFEDDIIQKKRQVATHTSYMS 160
Query: 687 CCRFL-DDN 710
CC FL DN
Sbjct: 161 CCTFLRSDN 169
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +1
Query: 394 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
+LRGH+ +Y + W +DSR LVS S D L V++
Sbjct: 397 SLRGHVGPVYQVAWSADSRLLVSGSADSTLKVFE 430
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 373 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 492
+Q R L GH A + + WG + + S SQD + +W
Sbjct: 225 VQGTVVRCLSGHTASVTCLRWGGEGL-IYSGSQDRTVKMW 263
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 34.3 bits (75), Expect = 0.088
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 379 MRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
M RTL GH + + W SDSR +VSAS D L +++
Sbjct: 119 MICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFE 157
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 373 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
+ R +TL+GH ++ ++ S +VS S D + +WD
Sbjct: 159 VTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWD 199
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 370 RIQMRTRRTLRGHLAKIYAMH--WGSDSRNLVSASQDGKLIVWD 495
+++ ++ RGH A YA + + D L+S DGKL +WD
Sbjct: 481 KLRFSKKKAFRGHNAAGYACNIDFSPDQSFLISGDADGKLFIWD 524
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 32.7 bits (71), Expect = 0.27
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +1
Query: 325 DTSLAQATSNLEPIGRI-QMRTRRT---LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 492
D S+A T + GR+ MRT R L GH +I+++ W + +++ S D + VW
Sbjct: 349 DGSVA-LTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVW 407
Query: 493 D 495
D
Sbjct: 408 D 408
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 364 IGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
I R+ +TL GH I W SDS+ +VS S D + V+D
Sbjct: 133 IWRMDFVYEKTLMGHRLGINEFSWSSDSKLIVSCSDDKLVKVFD 176
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +3
Query: 534 SSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSG*LSCCRFLDD 707
+++V C + PSG+ +A G D I+ R GN S +PGH +S F D
Sbjct: 190 TNYVFCCCFNPSGTLIASGSFDETIRIWC--ARNGNTIFS--IPGHEDPVSSVCFNRD 243
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 31.9 bits (69), Expect = 0.47
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 346 TSNLEPIGRIQMRT-RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
+SN +P R TL GH I+++ + S + LVSAS D + +W+
Sbjct: 444 SSNGDPFDSYDPRVLTETLTGHTDAIWSVAYHSSNSRLVSASSDSTVRLWE 494
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 370 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
+++ + TLR HL I AM + L +AS+DG + +W+
Sbjct: 346 QVKWNIKVTLRSHLDSIRAMQFHPVEPVLFTASEDGLIKLWN 387
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 31.9 bits (69), Expect = 0.47
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 346 TSNLEPIGRIQMRT-RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
+SN +P R TL GH I+++ + S + LVSAS D + +W+
Sbjct: 444 SSNGDPFDSYDPRVLTETLTGHTDAIWSVAYHSSNSRLVSASSDSTVRLWE 494
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 370 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
+++ + TLR HL I AM + L +AS+DG + +W+
Sbjct: 346 QVKWNIKVTLRSHLDSIRAMQFHPVEPVLFTASEDGLIKLWN 387
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 31.9 bits (69), Expect = 0.47
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +1
Query: 253 RLDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMR--TRRTLRGHLAKIYA 426
RL ++ E + IR+ L +++NL I R + ++GH +++
Sbjct: 234 RLWAIEPETDEKSENIREDSSTTPPDELT-SSANLFSINYTPYRCSSHAVMQGHDDWVHS 292
Query: 427 MHWGSDSRNLVSASQDGKLIVW 492
W +D R L++AS D I+W
Sbjct: 293 TVWSNDGRVLLTASSDKTCIIW 314
>AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical
protein C18E3.5 protein.
Length = 331
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 397 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
L+GH I + + +DS +LVSA D + VWD
Sbjct: 75 LKGHKGAIMEVKFNADSSHLVSAGTDKTVRVWD 107
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 379 MRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
M L+GH +IY + SD L SA D ++ +W+
Sbjct: 26 MAPTMVLQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWN 64
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +1
Query: 406 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHXXXXXXXXXXAHPG 543
H + +H+ ++R V+AS+DG + +WD AH G
Sbjct: 258 HTESVTDVHYSENARLYVTASKDGHVKIWDGVSNRCVETFKRAHDG 303
>Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical
protein ZK1307.6 protein.
Length = 702
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 391 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
R L H ++ + W D + L S D +L+VW+
Sbjct: 516 RKLTNHRQEVCGLKWSPDKQLLASGGNDNQLLVWN 550
>AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical
protein T02H6.1b protein.
Length = 528
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 391 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
+ L GH I+++ + + NL SASQD + +WD
Sbjct: 242 KDLSGHRGPIFSLTFQLKTNNLYSASQDRSVKMWD 276
>AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical
protein T02H6.1a protein.
Length = 550
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 391 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
+ L GH I+++ + + NL SASQD + +WD
Sbjct: 242 KDLSGHRGPIFSLTFQLKTNNLYSASQDRSVKMWD 276
>Z83016-1|CAB05407.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 397 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
L+GH ++ + + SD + VS S D +I+WD
Sbjct: 87 LKGHKKEVTDVAFASDGKKFVSISGDRSVILWD 119
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 382 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
R RTL GH ++Y++ + S+ + S S D + VWD
Sbjct: 407 RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWD 444
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 382 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
R RTL GH ++Y++ + S+ + S S D + VWD
Sbjct: 409 RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWD 446
>Z68314-8|CAA92666.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 397 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
L+GH ++ + + SD + VS S D +I+WD
Sbjct: 87 LKGHKKEVTDVAFASDGKKFVSISGDRSVILWD 119
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 394 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
T++GH + + + +DS +LVS D + VWD
Sbjct: 76 TIKGHSGAVMDLKFTTDSSSLVSCGTDKSVRVWD 109
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/52 (21%), Positives = 27/52 (51%)
Frame = +3
Query: 543 VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSG*LSCCRF 698
++ C+++P ++ G D ++ ++ ++ +LPGH G ++C F
Sbjct: 260 LLKCSWSPCERFITAGSSDRFLYVWETLSK----KIVYKLPGHMGSVNCTDF 307
>Z54281-9|CAA91052.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 397 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
L+GH ++ + + SD + VS S D +I+WD
Sbjct: 87 LKGHKKEVTDVAFASDGKKFVSISGDRSVILWD 119
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 406 HLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
H AK+ + W D+ L + S D +IVW+
Sbjct: 535 HTAKVACVSWSPDNVRLATGSLDNSVIVWN 564
>AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical
protein Y79H2A.6 protein.
Length = 368
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 394 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 492
TL H + + WG+ + +VS SQD VW
Sbjct: 53 TLSEHDLPVTGLDWGTKTNRIVSCSQDKNAFVW 85
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 406 HLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
H AK+ + W D+ L + S D +IVW+
Sbjct: 535 HTAKVACVSWSPDNVRLATGSLDNSVIVWN 564
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 382 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
R RTL GH ++Y++ + S+ + S S D + VWD
Sbjct: 409 RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWD 446
>Z92782-12|CAH60765.1| 328|Caenorhabditis elegans Hypothetical
protein F14F8.13 protein.
Length = 328
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/46 (23%), Positives = 30/46 (65%)
Frame = -1
Query: 148 MSLRSTLQRFSGDFYITIKIG*PLFGTFCIFSISPH*NKDISQVFI 11
++++S++ ++ F + I + +FGT C+ S++ + N+++S+ I
Sbjct: 142 LNIQSSVHKYLPHFTLCIILKDAVFGTACVLSLAKYLNEEVSEFCI 187
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 376 QMRTRRTLRGHLAKIYAMHWGSDSR-NLVSASQDGKLIVWD 495
+ R + L+GH + Y M W + +L++A DG + WD
Sbjct: 160 KFRPQLRLKGHEGEGYGMSWSNTREGHLLTAGDDGMICHWD 200
>U21321-1|AAG00051.1| 507|Caenorhabditis elegans Fizzy (cdc20
protein family) homologprotein 1 protein.
Length = 507
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 403 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
GH + A+ W +D VS S D +WD
Sbjct: 313 GHCRDVTALEWSADENMCVSGSSDRTAKIWD 343
>Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical
protein F44G3.2 protein.
Length = 372
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 681 VSPSGRAVRGTRARCLRASSGYKSSRC 601
+ P G+ ++ TR RC R+ +GY+ + C
Sbjct: 128 LDPKGKYIKSTRIRCGRSLNGYQFNPC 154
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 391 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 492
+ +RGH + I + + + +++S S DG + VW
Sbjct: 343 KEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVW 376
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 391 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 492
R L+GH A + W +VS++ DG VW
Sbjct: 437 RRLKGHTAVVRECDWHPTENEIVSSAWDGVTTVW 470
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 391 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 492
R L+GH A + W +VS++ DG VW
Sbjct: 478 RRLKGHTAVVRECDWHPTENEIVSSAWDGVTTVW 511
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 391 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 492
+ +RGH + I + + + +++S S DG + VW
Sbjct: 343 KEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVW 376
>AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform b protein.
Length = 211
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +1
Query: 250 ERLDSLRQEA-ETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYA 426
+R+D+ ++A + I +R A C + + P G Q L GH ++
Sbjct: 6 QRIDTQHRDAIHDAQLNIYGSRLATCGSDRLVKIFEVRPNG--QSYPMAELVGHSGPVWK 63
Query: 427 MHWGSDSRN--LVSASQDGKLIVWD 495
+ W L SAS D K+I+W+
Sbjct: 64 VSWAHPKYGGLLASASYDKKVIIWN 88
>AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform a protein.
Length = 313
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +1
Query: 250 ERLDSLRQEA-ETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYA 426
+R+D+ ++A + I +R A C + + P G Q L GH ++
Sbjct: 6 QRIDTQHRDAIHDAQLNIYGSRLATCGSDRLVKIFEVRPNG--QSYPMAELVGHSGPVWK 63
Query: 427 MHWGSDSRN--LVSASQDGKLIVWD 495
+ W L SAS D K+I+W+
Sbjct: 64 VSWAHPKYGGLLASASYDKKVIIWN 88
>Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 391 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
R GH A I A+ + R +VS G L++WD
Sbjct: 513 RIFSGHKASIIAVKFSPCGRYIVSLDAIGNLMIWD 547
>Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 391 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
R GH A I A+ + R +VS G L++WD
Sbjct: 513 RIFSGHKASIIAVKFSPCGRYIVSLDAIGNLMIWD 547
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 391 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
R L GH + + + D + +VS + DGK+ VWD
Sbjct: 419 RVLEGHEELVRCIRF--DEKRIVSGAYDGKIKVWD 451
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 391 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
R L GH + + + D+R ++S S D + VWD
Sbjct: 256 RILSGHTGSVLCLQY--DNRVIISGSSDATVRVWD 288
>U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical
protein K10D2.1b protein.
Length = 669
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +1
Query: 397 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDS 498
LRGH ++ + W + + L S S D ++I++++
Sbjct: 129 LRGHSMEVLTVEWSPNGKYLASGSIDYRIIIYNA 162
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +3
Query: 543 VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSREL 662
V+T ++P+G Y+A G +D IY+ + + V ++
Sbjct: 136 VLTVEWSPNGKYLASGSIDYRIIIYNARKLPDRITVLNDI 175
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +1
Query: 397 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDS 498
LRGH ++ + W + + L S S D ++I++++
Sbjct: 417 LRGHSMEVLTVEWSPNGKYLASGSIDYRIIIYNA 450
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +3
Query: 543 VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSREL 662
V+T ++P+G Y+A G +D IY+ + + V ++
Sbjct: 424 VLTVEWSPNGKYLASGSIDYRIIIYNARKLPDRITVLNDI 463
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 391 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
R L GH + + + D + +VS + DGK+ VWD
Sbjct: 419 RVLEGHEELVRCIRF--DEKRIVSGAYDGKIKVWD 451
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 391 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
R L GH + + + D+R ++S S D + VWD
Sbjct: 256 RILSGHTGSVLCLQY--DNRVIISGSSDATVRVWD 288
>AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical
protein K06A5.8d protein.
Length = 559
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 391 RTLRGHLAKIYAMH-WGSDSRNLVSASQDGKLIVWD 495
++++GH A I ++ W VS SQD + WD
Sbjct: 501 QSMKGHTAPILGLYTWSQAGNQFVSCSQDKTIRFWD 536
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 391 RTLRGHLAKIYAMH-WGSDSRNLVSASQDGKLIVWD 495
++++GH A I ++ W VS SQD + WD
Sbjct: 767 QSMKGHTAPILGLYTWSQAGNQFVSCSQDKTIRFWD 802
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 391 RTLRGHLAKIYAMH-WGSDSRNLVSASQDGKLIVWD 495
++++GH A I ++ W VS SQD + WD
Sbjct: 767 QSMKGHTAPILGLYTWSQAGNQFVSCSQDKTIRFWD 802
>Z47808-2|CAA87770.1| 415|Caenorhabditis elegans Hypothetical
protein D2013.2 protein.
Length = 415
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 397 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
L GH K+ + ++ L SA + GKL+ WD
Sbjct: 243 LNGHNGKVTTLCAAPAAKRLFSADEHGKLMCWD 275
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 370 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
RI++ R L GH A + W + + +V+AS D VWD
Sbjct: 268 RIRVPVMR-LTGHRAPVSCCEWLAGGQQMVTASWDRTANVWD 308
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 370 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
RI++ R L GH A + W + + +V+AS D VWD
Sbjct: 266 RIRVPVMR-LTGHRAPVSCCEWLAGGQQMVTASWDRTANVWD 306
>Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical
protein F23B2.4 protein.
Length = 1192
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +1
Query: 391 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
+TL+GH +Y + W + S D +I+W+
Sbjct: 54 QTLKGHKDLVYTVAWSHNGELFASGGADKLVILWN 88
>U40410-5|AAA81394.3| 1199|Caenorhabditis elegans Hypothetical
protein C54G7.4 protein.
Length = 1199
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 391 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 492
+ L GH A + W +++ L ++ G +IVW
Sbjct: 63 QALEGHNATVMNATWNENNQKLTTSDTSGLIIVW 96
>DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagellar
transport protein protein.
Length = 1192
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +1
Query: 391 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
+TL+GH +Y + W + S D +I+W+
Sbjct: 54 QTLKGHKDLVYTVAWSHNGELFASGGADKLVILWN 88
>AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical
protein W10C8.5 protein.
Length = 399
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 681 VSPSGRAVRGTRARCLRASSGYKSSRC 601
+ P G+ ++ TR RC R+ GY + C
Sbjct: 155 LDPKGKYIKSTRIRCGRSLKGYPFNPC 181
>AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical
protein F32B5.1 protein.
Length = 427
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 681 VSPSGRAVRGTRARCLRASSGYKSSRC 601
+ P G+ ++ TR RC R+ GY + C
Sbjct: 183 LDPKGKYIKSTRIRCGRSLKGYPFNPC 209
>Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical
protein VT23B5.2 protein.
Length = 931
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +3
Query: 546 MTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSG*LSC 689
MTCA A + + CG +++ + + +++ L GHS ++C
Sbjct: 543 MTCAAAGDETTLFCGNTSGCITVWKVNNKPLSMKKLSVLNGHSDAITC 590
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 397 LRGHLAKIYAMHWGSDSRNLV-SASQDGKLIVWD 495
L+GH + Y + W + L+ SAS D + WD
Sbjct: 168 LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWD 201
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 391 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 495
RT+RGH ++ + S + SA D + VWD
Sbjct: 291 RTMRGHTNYVFCCSFNPQSSLIASAGFDETVRVWD 325
>U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical
protein C10H11.8 protein.
Length = 382
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +3
Query: 528 LRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTRE 635
+R ++C Y+P G Y+ G + +++ +T E
Sbjct: 281 MREGHGLSCRYSPDGKYIVASGSEKEVYVFNSETME 316
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 391 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDS 498
+T +GH KI A+ D+ +SAS D + VW +
Sbjct: 245 QTFKGHNKKINAVVLHPDNITAISASADSHIRVWSA 280
>AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical
protein VT23B5.2 protein.
Length = 931
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +3
Query: 546 MTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSG*LSC 689
MTCA A + + CG +++ + + +++ L GHS ++C
Sbjct: 543 MTCAAAGDETTLFCGNTSGCITVWKVNNKPLSMKKLSVLNGHSDAITC 590
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 397 LRGHLAKIYAMHWGSDSRNLV-SASQDGKLIVWD 495
L+GH + Y + W + L+ SAS D + WD
Sbjct: 168 LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWD 201
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 397 LRGHLAKIYAMHWGSDSRNLV-SASQDGKLIVWD 495
L+GH + Y + W + L+ SAS D + WD
Sbjct: 168 LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWD 201
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,859,127
Number of Sequences: 27780
Number of extensions: 331048
Number of successful extensions: 1187
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1182
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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