Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1955
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.6  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   2.1  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   6.5  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   8.6  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 727 YFIIKAFQ*RLIFCSYCAYIFF 792
           YF++  F    I+  YCA+I F
Sbjct: 135 YFVVPLFFLLCIYYFYCAFIIF 156


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -1

Query: 530 IKHVAFFIIHKIKSLFFLEKKKRLD-*DIAFAYVIKNVITFINVA 399
           ++ VA+F+I  I ++ F EK+  L   ++     I  V TF  +A
Sbjct: 40  VQTVAYFVIFIILTIVFFEKRSALSPFELIQIRTINFVATFRTIA 84


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 6/32 (18%), Positives = 20/32 (62%)
 Frame = +1

Query: 259 QWS*VYRDIQLIASLVKNLFSMPFT*DNTLYI 354
           QW+ + ++++++A+     + +PF   N +++
Sbjct: 91  QWAQLIQNLKVVATTKTKAWFLPFVVTNIIFV 122


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 271 VYRDIQLIASLVKNLFSMPF 330
           VY+ + ++ S+VKN  S  F
Sbjct: 269 VYKPLPIVLSIVKNCLSYCF 288


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 271 VYRDIQLIASLVKNLFSMPF 330
           VY+ + ++ S+VKN  S  F
Sbjct: 269 VYKPLPIVLSIVKNCLSYCF 288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,291
Number of Sequences: 336
Number of extensions: 2795
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)